RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 SelpQ01102 768 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ptger2Q62053 362 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Me3Q8BMF3 604 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Itm2cQ91VK4 269 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Atp5c1Q91VR2 298 aaKnown RBP9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ctu1Q99J10 420 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Stk39Q9Z1W9 556 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Myh7bA2AQP0 1941 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Rnf123Q5XPI3 1314 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Adgra2Q91ZV8 1336 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Gm20425E9Q035 978 aaKnown RBP9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 SrprbP47758 269 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Cyp4f37Q3V1F1 546 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Gm10392Q3V3I3 114 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Adgrg6Q6F3F9 1165 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Peg10Q7TN75 958 aaKnown RBP9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Mcph1Q7TT79 822 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Aoc2Q812C9 757 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Gmcl1Q920G9 524 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 LdhaP06151 332 aaKnown RBP9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Vps37dQ810I0 261 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Acnat2Q8BGG9 420 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Srgap1Q91Z69 1062 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Npm3Q9CPP0 175 aaKnown RBP9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ubxn8Q9QZ49 277 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Vwa3bJ9JI28 736 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Hoxc10P31257 342 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Stat3P42227 770 aaKnown RBP9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Siah1bQ06985 282 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Fam117bQ3U3E2 584 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Tbc1d5Q80XQ2 815 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 SdsQ8VBT2 327 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Gpr108Q91WD0 569 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Cd2apQ9JLQ0 637 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Tanc1Q0VGY8 1856 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Igsf9bE9PZ19 1328 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Plcg1Q62077 1302 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Rgs12Q8CGE9 1381 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Cdh23Q99PF4 3354 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Pabpc1lA2A5N3 607 aaKnown RBP9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Catsper2A2ARP9 588 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Zscan20B2KFW1 1030 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 TxnP10639 105 aaKnown RBP9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 FlgP11088 336 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Dnm1P39053 867 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Smc3Q9CW03 1217 aaKnown RBP9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ccdc7Q9D541 371 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Tmem191cQ9JJB1 302 aa9.59□□□□□ -0.87
Trim39-205ENSMUST00000173369 Dock5B2RY04 1868 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Wfdc16A2A5H4 111 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Fbxl16A2RT62 479 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 MycP01108 439 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 LtkP08923 888 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 GabpaQ00422 454 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Dnai1Q8C0M8 701 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Depdc1aQ8CIG0 804 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Slc5a5Q99PN0 618 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 PdhbQ9D051 359 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Mrps25Q9D125 171 aaKnown RBP9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Inpp4aQ9EPW0 939 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Lamp1P11438 406 aaKnown RBP9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Hoxa11P31311 313 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Hmgcs2P54869 508 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Gdf10P97737 476 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Pdlim7Q3TJD7 457 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Grm4Q68EF4 912 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 PicalmQ7M6Y3 660 aaKnown RBP9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Vta1Q9CR26 309 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Cmtm5Q9D6G9 156 aa9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Smchd1Q6P5D8 2007 aaKnown RBP9.58□□□□□ -0.88
Trim39-205ENSMUST00000173369 Pgk2P09041 417 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Psmc4P54775 418 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Cplx2P84086 134 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Sox10Q04888 466 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Cyp2e1Q05421 493 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Tmem63bQ3TWI9 832 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Ppp1r9bQ6R891 817 aaKnown RBP9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Fbxo11Q7TPD1 930 aaKnown RBP9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Lca5Q80ST9 704 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Gys2Q8VCB3 704 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Ces1Q8VCC2 565 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Socs7Q8VHQ2 579 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Terf2ipQ91VL8 393 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Krtap5-3Q9D226 196 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Arpp21Q9DCB4 807 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Zfp804bA0A0G2JGH6 1343 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Celf5D3Z4T1 395 aaKnown RBP9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Rgs9O54828 675 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Calm1P0DP26 149 aaKnown RBP9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Calm2P0DP27 149 aaKnown RBP9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Calm3P0DP28 149 aaKnown RBP9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Cst8P32766 142 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Gjb4Q02738 266 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Cntnap5bQ0V8T8 1292 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Tshz1Q5DTH5 1084 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 GlmnQ8BZM1 596 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 RadxQ8C779 850 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Traf7Q922B6 594 aa9.57□□□□□ -0.88
Trim39-205ENSMUST00000173369 Smarce1O54941 411 aaKnown RBP9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Mars2Q499X9 586 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 541.3 ms