RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Tacc1Q6Y685 774 aa12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Apobec3Q99J72 440 aaKnown RBP12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Tube1Q9D6T1 475 aa12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Myh7bA2AQP0 1941 aa12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Zfpm1O35615 995 aa12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Cnga2Q62398 664 aa12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Atxn2lQ7TQH0 1049 aaKnown RBP12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Sde2Q8K1J5 448 aaKnown RBP12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 AdarQ99MU3 1178 aaKnown RBP12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Lmbr1Q9JIT0 490 aa12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Kank3Q9Z1P7 791 aa12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 4932429P05RikA2ADI4 785 aa12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Cyp3a25O09158 503 aa12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Tpp1O89023 562 aa12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Pbx1P41778 430 aa12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Atp6v1aP50516 617 aaKnown RBP12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Cdr2P97817 455 aa12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Olfr121Q5CZY0 321 aa12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Spata16Q8C636 571 aa12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Spice1Q8C804 860 aa12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 PpanQ91YU8 470 aaKnown RBP12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Krtap5-3Q9D226 196 aa12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Copb1Q9JIF7 953 aa12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Trp53inp1Q9QXE4 239 aa12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Cfap44E9Q5M6 1843 aa12.02□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Znfx1Q8R151 1909 aaKnown RBP12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ube4aE9Q735 1028 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Siah1aP61092 282 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 ItgadQ3V0T4 1168 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 MycbpapQ5SUV2 932 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 NelfbQ8C4Y3 580 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Wdr60Q8C761 999 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Uchl5Q9WUP7 329 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Knop1Q9Z2Q2 478 aaKnown RBP12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Palm3A2TJV2 734 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ccdc85cE9Q6B2 420 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Trim55G3X8Y1 545 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 GabrdP22933 449 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 NppbP40753 121 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Rps8P62242 208 aaKnown RBP12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Kiaa1468Q148V7 1216 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Gngt1Q61012 74 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Igbp1Q61249 340 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Irak1Q62406 710 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 CrebzfQ91ZR3 358 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Dbndd2Q9CRD4 158 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Adarb2Q9JI20 745 aa12.02□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Lrrc4bP0C192 709 aa12.01□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Cct6bQ61390 531 aa12.01□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Slc51aQ8R000 340 aa12.01□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 McamQ8R2Y2 648 aaKnown RBP12.01□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Sar1bQ9CQC9 198 aa12.01□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Lonrf3Q9D4H7 753 aa12.01□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 NagaQ9QWR8 415 aa12.01□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Pak1O88643 545 aa12.01□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Rrm1P07742 792 aa12.01□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Stim1P70302 685 aa12.01□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Sec23aQ01405 765 aa12.01□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Smarca1Q6PGB8 1046 aa12.01□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Sgpp1Q9JI99 430 aa12.01□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Kif23E9Q5G3 953 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Prl7d1P04769 244 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 NfixP70257 488 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Tax1bp1Q3UKC1 814 aaKnown RBP12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ddx49Q4FZF3 480 aaKnown RBP12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Gja3Q64448 417 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Olfr118Q7TRJ6 321 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Adcy2Q80TL1 1090 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Def6Q8C2K1 630 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Tango6Q8C3S2 1079 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Leng8Q8CBY3 785 aaKnown RBP12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Tut1Q8R3F9 869 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Adcy3Q8VHH7 1145 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ctnnbl1Q9CWL8 563 aaKnown RBP12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 RabggtaQ9JHK4 567 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 EvplQ9D952 2035 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ccdc6D3YZP9 469 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Scgb2b19J3QM75 112 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Spata5Q3UMC0 893 aaKnown RBP12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Acbd5Q5XG73 508 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ppp2r5bQ6PD28 497 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Tas2r124Q7M718 309 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Sdad1Q80UZ2 687 aaKnown RBP12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Prpf40bQ80W14 870 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Bpifb6Q8BU51 449 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Fam161bQ8CB59 589 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Sh3tc1G3X9F6 1346 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Prr16A3KMN5 304 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 1700018F24RikB2RW27 314 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Gfpt1P47856 697 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ezh2Q61188 746 aaKnown RBP12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 HelbQ6NVF4 1074 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Txndc16Q7TN22 820 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Cct8l1Q80YT3 562 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 MtrrQ8C1A3 696 aa12□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Map3k15A2AQW0 1331 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Rad23bP54728 416 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Atp8b1Q148W0 1251 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Dok7Q18PE0 504 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Mylk4Q5SUV5 386 aa11.99□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms