RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Ube3aO08759 870 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Calm1P0DP26 149 aaKnown RBP12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Calm2P0DP27 149 aaKnown RBP12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Calm3P0DP28 149 aaKnown RBP12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 RaraP11416 462 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 NfixP70257 488 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Emc10Q3TAS6 258 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ccdc114Q3UX62 658 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Aggf1Q7TN31 711 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Kctd3Q8BFX3 815 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Pspc1Q8R326 523 aaKnown RBP12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Q91WD4 421 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Abhd2Q9QXM0 425 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Znf609Q8BZ47 1413 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ptpn12P35831 775 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Gngt1Q61012 74 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Krt40Q6IFX3 439 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Jade2Q6ZQF7 829 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Znf771Q8BJ90 317 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 ToporslQ9D2F8 683 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ubxn8Q9QZ49 277 aa12.93□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Serpina16D3Z660 418 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ube4aE9Q735 1028 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Antxr2Q6DFX2 487 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Asic1Q6NXK8 526 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ppp2r5bQ6PD28 497 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Krit1Q6S5J6 736 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Spag7Q7TNE3 227 aaKnown RBP12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ildr1Q8CBR1 537 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Mss51Q9D5Z5 446 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Fbxo3Q9DC63 480 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Lrp6O88572 1613 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Znf638Q61464 1960 aaKnown RBP12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Odf2A3KGV1 830 aaKnown RBP12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ap1g2O88512 791 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Rhbdl3P58873 404 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Sdad1Q80UZ2 687 aaKnown RBP12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 McamQ8R2Y2 648 aaKnown RBP12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 PpanQ91YU8 470 aaKnown RBP12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Sel1lQ9Z2G6 790 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 GakQ99KY4 1305 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Zfp853A0A1D5RM95 733 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Pfkfb3A7UAK5 555 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ppef2O35385 757 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Kdm1aQ6ZQ88 853 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Tmem134Q8R0J4 195 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Eps8l2Q99K30 729 aa12.92□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Fam186bD3Z420 943 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Psmd14O35593 310 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ssrp1Q08943 708 aaKnown RBP12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Sec31aQ3UPL0 1230 aaKnown RBP12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Rc3h1Q4VGL6 1130 aaKnown RBP12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ddx3yQ62095 658 aaKnown RBP12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Lrrn2Q6PHP6 730 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 DlatQ8BMF4 642 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 CutaQ9CQ89 177 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 1700018B08RikQ9DA83 213 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Znfx1Q8R151 1909 aaKnown RBP12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ccdc24E9PUW8 296 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Klra1P20937 262 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Atp8b1Q148W0 1251 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Eme2Q56A04 373 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Mcm7Q61881 719 aaKnown RBP12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Zdhhc14Q8BQQ1 489 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ndufv1Q91YT0 464 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ccdc96Q9CR92 584 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Nr2e3Q9QXZ7 395 aa12.91□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Scgb2b11A0A087WR49 112 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Slc12a2P55012 1205 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Zfp781Q0P5U5 243 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Bbof1Q3V079 533 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Fxr1Q61584 677 aaKnown RBP12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Mtss1lQ6P9S0 715 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ttll4Q80UG8 1193 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Lrsam1Q80ZI6 727 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ccdc181Q80ZU5 509 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Dnajc7Q9QYI3 494 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 PcQ05920 1178 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Foxn3Q499D0 457 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 D130040H23RikQ8BII3 405 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Rab11fip4Q8BQP8 635 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 EpgnQ924X1 152 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 MymkQ9D1N4 221 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Git2Q9JLQ2 708 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Prl2c5Q9JLV9 222 aa12.9□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Tubb4bP68372 445 aaKnown RBP12.9□□□□□ -0.35
Col9a1-202ENSMUST00000088349 NeblQ0II04 452 aa12.9□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ccdc42Q5SV66 316 aa12.9□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Arid3aQ62431 601 aa12.9□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ccdc38Q8CDN8 563 aa12.9□□□□□ -0.35
Col9a1-202ENSMUST00000088349 HdlbpQ8VDJ3 1268 aaKnown RBP12.9□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Slc44a4Q91VA1 707 aa12.9□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Adarb2Q9JI20 745 aa12.9□□□□□ -0.35
Col9a1-202ENSMUST00000088349 NpcdF8VQB8 469 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Akap2O54931 893 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Snx12O70493 165 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ftl1P29391 183 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Dok7Q18PE0 504 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 2310002L09RikQ9D7L5 217 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Kcna1P16388 495 aa12.89□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 53.4 ms