RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Krt78E9Q0F0 1068 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Msh3P13705 1091 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Nek1P51954 1203 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Eif5P59325 429 aaKnown RBP12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Nbr1P97432 988 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Kctd1Q5M956 257 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 PigsQ6PD26 555 aaKnown RBP12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Slc9c1Q6UJY2 1175 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Sval3Q76I99 144 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Dusp9Q7TNL7 452 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Asnsd1Q8BFS9 627 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Armc6Q8BNU0 468 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Caps2Q8BUG5 550 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Ankk1Q8BZ25 745 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Plcg2Q8CIH5 1265 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Onecut3Q8K557 490 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Tmx1Q8VBT0 278 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Wdr64Q9D565 1086 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Cbx6Q9DBY5 414 aa12.77□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Fam205a1D3YZF6 1314 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Usp31E9Q6Y8 1344 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Gm7356A0A087WSA6 508 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Herc3A6H6S0 1050 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Slc39a2G3X943 309 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 LtkP08923 888 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Adssl1P28650 457 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Cdc25aP48964 514 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 CebpzP53569 1052 aaKnown RBP12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Kcnb1Q03717 857 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Lrrfip1Q3UZ39 729 aaKnown RBP12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Thrap3Q569Z6 951 aaKnown RBP12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Akap4Q60662 849 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Kcnj11Q61743 390 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Ccdc122Q8BVN0 290 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Gpsm2Q8VDU0 679 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Cabp7Q91ZM8 215 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Mettl16Q9CQG2 553 aaKnown RBP12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Snrnp35Q9D384 244 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Krt34Q9D646 392 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Ccdc94Q9D6J3 314 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Cfap45Q9D9U9 551 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Eid1Q9DCR4 169 aa12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Fxr2Q9WVR4 673 aaKnown RBP12.76□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Sbf2E9PXF8 1872 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Ulk4Q3V129 1303 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Rsbn1lD3Z0K6 821 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 NcapgE9PWG6 1004 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Rad51bO35719 350 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Pla2g4bP0C871 782 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Kcnd1Q03719 651 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 D630036H23RikQ3UQD6 204 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Pnma5Q5DTT8 618 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Vmn1r209Q5NC97 312 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Ccna1Q61456 421 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Mtss1lQ6P9S0 715 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Vgll2Q8BGW8 322 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Zdhhc14Q8BQQ1 489 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Mrpl11Q9CQF0 192 aaKnown RBP12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Dnajc19Q9CQV7 116 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Taf1dQ9D4V4 322 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Tgm5Q9D7I9 724 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Arpp21Q9DCB4 807 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Pex3Q9QXY9 372 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Uchl5Q9WUP7 329 aa12.75□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Atrnl1Q6A051 1378 aa12.74□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Mageb2A2AHM0 380 aa12.74□□□□□ -0.37
Vamp1-202ENSMUST00000063588 OatP29758 439 aa12.74□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Cdc37Q61081 379 aa12.74□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Ift88Q61371 824 aa12.74□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Ptger2Q62053 362 aa12.74□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Scfd2Q8BTY8 684 aa12.74□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Ccdc38Q8CDN8 563 aa12.74□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Depdc1aQ8CIG0 804 aa12.74□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Havcr2Q8VIM0 281 aa12.74□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Anapc4Q91W96 807 aa12.74□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Ppp1r3gQ9CW07 347 aa12.74□□□□□ -0.37
Vamp1-202ENSMUST00000063588 AdnpQ9Z103 1108 aaKnown RBP12.74□□□□□ -0.37
Vamp1-202ENSMUST00000063588 4932429P05RikA2ADI4 785 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Pde4aO89084 844 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Anks1aP59672 1150 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Rps12P63323 132 aaKnown RBP12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Cyp2e1Q05421 493 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Stxbp3Q60770 592 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Vil1Q62468 827 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Taok2Q6ZQ29 1240 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Klhl30Q8C3F7 581 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Kbtbd13Q8C828 458 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Inpp5bQ8K337 993 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 MyripQ8K3I4 856 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Ushbp1Q8R370 680 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Ifih1Q8R5F7 1025 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Trub2Q91WG3 331 aaKnown RBP12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Trex1Q91XB0 314 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Slc5a5Q99PN0 618 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Ifi35Q9D8C4 286 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Ubiad1Q9DC60 336 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Cd274Q9EP73 290 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Pkd2l2Q9JLG4 621 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 Acot3Q9QYR7 432 aa12.73□□□□□ -0.37
Vamp1-202ENSMUST00000063588 GsdmeQ9Z2D3 512 aa12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms