RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Ccdc57Q6PHN1 1016 aa13.46□□□□□ -0.25
Upk3b-201ENSMUST00000062606 Rab3il1Q8VDV3 383 aa13.46□□□□□ -0.25
Upk3b-201ENSMUST00000062606 Sapcd2Q9D818 391 aa13.46□□□□□ -0.25
Upk3b-201ENSMUST00000062606 Jag1Q9QXX0 1218 aa13.46□□□□□ -0.25
Upk3b-201ENSMUST00000062606 Krt85Q9Z2T6 507 aa13.46□□□□□ -0.25
Upk3b-201ENSMUST00000062606 Heatr4E9Q357 955 aa13.46□□□□□ -0.25
Upk3b-201ENSMUST00000062606 LeprP48356 1162 aa13.46□□□□□ -0.25
Upk3b-201ENSMUST00000062606 Spata18Q0P557 537 aa13.46□□□□□ -0.25
Upk3b-201ENSMUST00000062606 GmpsQ3THK7 693 aa13.46□□□□□ -0.25
Upk3b-201ENSMUST00000062606 Stambpl1Q76N33 436 aa13.46□□□□□ -0.25
Upk3b-201ENSMUST00000062606 Fam76aQ922G2 307 aa13.46□□□□□ -0.25
Upk3b-201ENSMUST00000062606 Zbtb7aO88939 569 aaKnown RBP13.46□□□□□ -0.26
Upk3b-201ENSMUST00000062606 FosbP13346 338 aa13.46□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Ppfia3P60469 1194 aa13.46□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Ifit2Q64112 472 aa13.46□□□□□ -0.26
Upk3b-201ENSMUST00000062606 AidaQ8C4Q6 305 aa13.46□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Zfp113Q8C689 439 aa13.46□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Q8CEZ4 452 aa13.46□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Ccdc92Q8VDN4 314 aa13.46□□□□□ -0.26
Upk3b-201ENSMUST00000062606 MlphQ91V27 590 aa13.46□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Gpr108Q91WD0 569 aa13.46□□□□□ -0.26
Upk3b-201ENSMUST00000062606 NsmfQ99NF2 532 aa13.46□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Aldh1b1Q9CZS1 519 aa13.46□□□□□ -0.26
Upk3b-201ENSMUST00000062606 PatjQ63ZW7 1834 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Krt24A1L317 512 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Jakmip2D3YXK0 820 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Fam186bD3Z420 943 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Ccdc121E9Q6D3 323 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Lrrc6O88978 473 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Ddr1Q03146 911 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Zscan26Q5RJ54 466 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 PygbQ8CI94 843 aaKnown RBP13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Slc51aQ8R000 340 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Srfbp1Q9CZ91 441 aaKnown RBP13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 IcoslgQ9JHJ8 322 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Dcdc2bF7BCK0 340 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Gml2G5E8L7 176 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Jakmip3Q5DTN8 844 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Wdr35Q8BND3 1181 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Plcd1Q8R3B1 756 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Pex19Q8VCI5 299 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Ascc2Q91WR3 749 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 TicrrQ8BQ33 1889 aa13.45□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Cacna2d1O08532 1103 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Cap1P40124 474 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Gspt2Q149F3 632 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Tom1l2Q5SRX1 507 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 DaglaQ6WQJ1 1044 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Ctage5Q8R311 779 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Xrcc4Q924T3 326 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Pde4aO89084 844 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Akr1b8P45377 316 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Atp8b1Q148W0 1251 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Ctnna3Q65CL1 895 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Irak4Q8R4K2 459 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Ubxn4Q8VCH8 506 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Sept12Q9D451 317 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Q9D9S1 216 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Rcan1Q9JHG6 198 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Gm3409A0A0G2JE67 319 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 1700113H08RikE9Q9Q5 327 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Eif3j1Q3UGC7 261 aaKnown RBP13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Prpf4bQ61136 1007 aaKnown RBP13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Eif3j2Q66JS6 263 aa13.44□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Speer2E9Q9U2 264 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Stx1aO35526 288 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Evi5P97366 809 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Tmprss11eQ5S248 423 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Ccdc148Q6P5U8 527 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Txnrd3Q99MD6 652 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 4933428M09RikQ9D3X3 192 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Cbx8Q9QXV1 362 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Fut8Q9WTS2 575 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Usp42B2RQC2 1324 aaKnown RBP13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Mfsd4b4J3QNS5 503 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Grem2O88273 168 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Vcam1P29533 739 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Wnt10bP48614 389 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Mybl1P51960 751 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Cep112Q5PR68 954 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Trmt2aQ8BNV1 574 aaKnown RBP13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Dnm3Q8BZ98 863 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Tsr2Q8C8T8 191 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 ImmtQ8CAQ8 757 aaKnown RBP13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Tada3Q8R0L9 432 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Borcs6Q9D6W8 360 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Plekhg2Q6KAU7 1340 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Clec11aO88200 328 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 RpsaP14206 295 aaKnown RBP13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 CnpP16330 420 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Nat2P50295 290 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Lrrcc1Q69ZB0 1026 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Olfr118Q7TRJ6 321 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Maats1Q8BRC6 783 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Msh5Q9QUM7 833 aa13.43□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Lnx1O70263 728 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Q3TYL0 343 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Ppp1r7Q3UM45 361 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Trim56Q80VI1 734 aaKnown RBP13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Bap1Q99PU7 728 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms