RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Wnt7aP24383 349 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ppp1r7Q3UM45 361 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Hdac4Q6NZM9 1076 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Lrsam1Q80ZI6 727 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Klhl7Q8BUL5 586 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Sirt2Q8VDQ8 389 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 NenfQ9CQ45 171 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Mrpl12Q9DB15 201 aaKnown RBP10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Capn12Q9ER56 720 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tfap4Q9JIZ5 338 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ccnt1Q9QWV9 724 aaKnown RBP10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tcp10bE9PYJ0 438 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ppfibp2O35711 882 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Il15P48346 162 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tshz1Q5DTH5 1084 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Krt40Q6IFX3 439 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Gga3Q8BMI3 718 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Haus2Q9CQS9 234 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Smco2Q9DA21 347 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tex13c2A0A0G2JGA3 530 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Atp8b5A3FIN4 1183 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Sec24cG3X972 1096 aaKnown RBP10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Mx1P09922 631 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Sap30bpQ02614 308 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Sec31aQ3UPL0 1230 aaKnown RBP10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Lrrc36Q3V0M2 755 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Prpf38aQ4FK66 312 aaKnown RBP10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Mum1l1Q4VA55 681 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Aggf1Q7TN31 711 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 D130040H23RikQ8BII3 405 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ttc26Q8BS45 554 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Gpcpd1Q8C0L9 675 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Txndc5Q91W90 417 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ubxn8Q9QZ49 277 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Fbf1A2A870 1173 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 PcQ05920 1178 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Dok7Q18PE0 504 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Dcaf17Q3TUL7 519 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Msl1Q6PDM1 616 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Cep95Q8BVV7 827 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Grin3bQ91ZU9 1003 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 AdarQ99MU3 1178 aaKnown RBP10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 CutaQ9CQ89 177 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 BcorQ8CGN4 1759 aa10.82□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ano3A2AHL1 981 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Gm5134E9QAB5 671 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Gna15P30678 374 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tlr8P58682 1032 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Eya3P97480 510 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Snai1Q02085 264 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Rapgef1Q3UHC1 1224 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tmem63cQ8CBX0 802 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 NapaQ9DB05 295 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Thsd7aQ69ZU6 1645 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Nr1i2O54915 431 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Hps5P59438 1126 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Znf18Q810A1 556 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 TxlnbQ8VBT1 685 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 ParnQ8VDG3 624 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 HdlbpQ8VDJ3 1268 aaKnown RBP10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Efhd1Q9D4J1 240 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 4931408C20RikE9PWP9 1381 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ap1g2O88512 791 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Art2aP17981 287 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Aak1Q3UHJ0 959 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Olfr121Q5CZY0 321 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Irak1Q62406 710 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Fkbp3Q62446 224 aaKnown RBP10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Als2cr12Q8BVM7 383 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Fam53cQ8BXQ8 393 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Taok3Q8BYC6 898 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Saal1Q9D2C2 474 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Galnt15Q9D2N8 638 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Syce1Q9D495 329 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Itga2bQ9QUM0 1033 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Orc1Q9Z1N2 840 aaKnown RBP10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ric1Q69ZJ7 1422 aa10.81□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Kif23E9Q5G3 953 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Slurp2P0DP59 97 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Herc4Q6PAV2 1057 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Pabpc4Q6PHQ9 660 aaKnown RBP10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tubb2aQ7TMM9 445 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Q8C5C9 218 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Kiaa1024Q8K3V7 917 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tubb2bQ9CWF2 445 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Nme9A0A1L1SUL6 329 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Bpifb4A2BGH0 617 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Bnip3O55003 187 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Gas8Q60779 478 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ctnna3Q65CL1 895 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Iqcb1Q8BP00 598 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Sept14Q9DA97 430 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Myo1cQ9WTI7 1063 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Col20a1Q923P0 1320 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Gm28510A0A087WP28 240 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ces1aE9PYP1 563 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 RaraP11416 462 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ift74Q8BKE9 600 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Lmbrd1Q8K0B2 537 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Q91WD4 421 aa10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms