RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Dnajb7Q9QYI8 312 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 VimP20152 466 aaKnown RBP20.2■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Q3TTJ4 293 aa20.2■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ovgp1Q62010 721 aa20.2■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Kiaa0319lQ8K135 1048 aa20.2■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Kcnk13Q8R1P5 405 aa20.2■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Cnbd1B1AWM0 430 aa20.2■□□□□ 0.82
Scaf11-201ENSMUST00000047835 GssP51855 474 aa20.2■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Adcy3Q8VHH7 1145 aa20.2■□□□□ 0.82
Scaf11-201ENSMUST00000047835 CemipQ8BI06 1361 aa20.2■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Tex13c2A0A0G2JGA3 530 aa20.2■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Atp11aP98197 1187 aa20.2■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Anks6Q6GQX6 883 aa20.2■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ift20Q61025 132 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ubxn2aQ99KJ0 258 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Glrx3Q9CQM9 337 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Mms19Q9D071 1031 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Hace1Q3U0D9 909 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Rbm12b2Q66JV4 834 aaKnown RBP20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Kiaa1841Q68FF0 718 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Six6os1Q9CTN5 574 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Zfyve19Q9DAZ9 389 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Atp7bQ64446 1462 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Qrich1Q3UA37 777 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Gm5168Q4KL04 211 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Swap70Q6A028 585 aaKnown RBP20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Cct8l1Q80YT3 562 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Snrnp35Q9D384 244 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ttc41Q692V3 1318 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 CrkQ64010 304 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Spata24Q6P926 205 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Vps52Q8C754 723 aaKnown RBP20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ccdc6D3YZP9 469 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Q3UJP5 209 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Krt39Q6IFX4 482 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Sdad1Q80UZ2 687 aaKnown RBP20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 BbxQ8VBW5 907 aa20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Prpf3Q922U1 683 aaKnown RBP20.19■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Klhl34A2AI76 644 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Tor1aip1Q921T2 595 aaKnown RBP20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Elmsan1E9Q2I4 1089 aaKnown RBP20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Sept7O55131 436 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Vps33bP59016 617 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Bach2P97303 839 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 DSCC1Q14AI0 399 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Dnaaf2Q8BPI1 814 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 AK157302I3ITR1 129 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Nmt2O70311 529 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Dync1i1O88485 628 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Zfp341Q6PGC9 846 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Mb21d2Q8C525 428 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 CutaQ9CQ89 177 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Isca1Q9D924 129 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Aox2Q5SGK3 1345 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Lcmt1A0A0U1RNF2 332 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 AdkP55264 361 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Cnksr2Q80YA9 1032 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Slfn1Q9Z0I7 337 aa20.18■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Krt78E9Q0F0 1068 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 YwhaeP62259 255 aaKnown RBP20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Tubb5P99024 444 aaKnown RBP20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ccdc85aQ5SP85 500 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Bola2Q8BGS2 86 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ddx19bQ8BZY3 494 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Serpinb13Q8CDC0 389 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Mfap3Q922T2 349 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Grem2O88273 168 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Rassf2Q8BMS9 326 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Cplx3Q8R1B5 158 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Msantd4Q91YU3 345 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Rilpl1Q9JJC6 406 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Akt3Q9WUA6 479 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 NhsB1AV60 1647 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Cplx4Q80WM3 160 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ppp1r16bQ8VHQ3 568 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 JmyQ9QXM1 983 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Cyp2c68K7N6C2 491 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Tmod1P49813 359 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Stim2P83093 746 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ankrd45Q810N6 248 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 TbcbQ9D1E6 244 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Fam114a1Q9D281 569 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Cyp2c69E9PXC3 491 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 MyocO70624 490 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Cyp2c40P56657 491 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Tubb2aQ7TMM9 445 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Terb1Q8C0V1 768 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Hps3Q91VB4 1002 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Tubb2bQ9CWF2 445 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Copb1Q9JIF7 953 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Spata31d1bE9QA57 1361 aa20.17■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Cd22P35329 862 aa20.16■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Gm13023A2A8N2 498 aa20.16■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Sulf1Q8K007 870 aa20.16■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Kif2aP28740 705 aa20.16■□□□□ 0.82
Scaf11-201ENSMUST00000047835 FerP70451 823 aa20.16■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Atp1a1Q8VDN2 1023 aaKnown RBP20.16■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Arfgap2Q99K28 520 aa20.16■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Dcaf15Q6PFH3 600 aa20.16■□□□□ 0.82
Scaf11-201ENSMUST00000047835 IarsQ8BU30 1262 aa20.16■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms