RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Angptl3Q9R182 455 aa18.21■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Calb1P12658 261 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Polr2fP61219 127 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Q9DAQ4 598 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Lmnb2P21619 596 aaKnown RBP18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Map3k7clP58500 142 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Aggf1Q7TN31 711 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Axin2O88566 840 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Eif2aQ8BJW6 581 aaKnown RBP18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Rcor2Q8C796 523 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Gtpbp10Q8K013 366 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Add2Q9QYB8 725 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Rims1Q99NE5 1463 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Tulp4Q9JIL5 1547 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Myo3aQ8K3H5 1613 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Glt1d1A4FUP9 346 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Myo1aO88329 1043 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Q3TTJ4 293 aa18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Zcchc8Q9CYA6 709 aaKnown RBP18.2■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Pde4aO89084 844 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Gna14P30677 355 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 NpeppsQ11011 920 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Rnf40Q3U319 1001 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 WaplQ65Z40 1200 aaKnown RBP18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Uggt1Q6P5E4 1551 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Nr2e3Q9QXZ7 395 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Atp10aO54827 1508 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Znf608Q56A10 1511 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Col15a1O35206 1367 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Mroh8E9PYI4 1049 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Ric8aQ3TIR3 530 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Ankrd13aQ80UP5 588 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Naa25Q8BWZ3 972 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Cnpy3Q9DAU1 276 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Gm5592Q3V0A6 857 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Clca2Q8BG22 942 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Enox1Q8BHR2 643 aaKnown RBP18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 GlyctkQ8QZY2 523 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Gm11549A0A286YD83 63 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Ercc5P35689 1170 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Sh3bp1P55194 680 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Stim2P83093 746 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Ccdc92bQ5SUE3 299 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Elf1Q60775 612 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Card14Q99KF0 999 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Efcc1Q9JJF6 558 aa18.19■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Nr2f2P43135 414 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Kiaa1468Q148V7 1216 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 HomezQ80W88 542 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Cracr2bQ80ZJ8 394 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Ttll1Q91V51 423 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Sf3a3Q9D554 501 aaKnown RBP18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Sdr42e1Q9D665 394 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Lrrc32G3XA59 663 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 D130040H23RikQ8BII3 405 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Tmem87aQ8BXN9 555 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Vps37bQ8R0J7 285 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Yeats2Q3TUF7 1407 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Gm14525B1AZA0 212 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Gm2012B1B0R1 212 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Adcy8P97490 1249 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Gm14819Q62478 212 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Tbc1d23Q8K0F1 684 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Cdhr2E9Q7P9 1308 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Lbhd1A0A087WPA0 259 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Flot1O08917 428 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Cpsf2O35218 782 aaKnown RBP18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Acap3Q6NXL5 833 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Arhgap10Q6Y5D8 786 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Pus7lQ8CE46 702 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Eaf2Q91ZD6 262 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Zfyve19Q9DAZ9 389 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Strn3Q9ERG2 796 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 IcoslgQ9JHJ8 322 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 GdaQ9R111 454 aa18.18■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Krt78E9Q0F0 1068 aa18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Dnm3Q8BZ98 863 aa18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Atp1a1Q8VDN2 1023 aaKnown RBP18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Bag2Q91YN9 210 aa18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Prpf3Q922U1 683 aaKnown RBP18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Fhod3Q76LL6 1578 aa18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Eddm13E9Q7F5 164 aa18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 ZfxP17012 799 aa18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Slc12a2P55012 1205 aa18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Nbr1P97432 988 aa18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Rbm15bQ6PHZ5 887 aaKnown RBP18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Trim60Q8VI40 466 aa18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 YarsQ91WQ3 528 aaKnown RBP18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Med14A2ABV5 1459 aaKnown RBP18.17■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Zfp317Q8C0Q5 607 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Pcdhb15Q91Y04 786 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 CactinQ9CS00 772 aaKnown RBP18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Xrcc6P23475 608 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Ddx49Q4FZF3 480 aaKnown RBP18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Pim2Q62070 370 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Cbwd1Q8VEH6 393 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Rwdd2aQ9D9S3 292 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 GsdmeQ9Z2D3 512 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Dot1lQ6XZL8 1540 aa18.16■□□□□ 0.5
Ubfd1-201ENSMUST00000033158 Gimd1E9PW74 217 aa18.16■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms