RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Cep70Q6IQY5 616 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Rbm26Q6NZN0 1012 aaKnown RBP11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ctdspl2Q8BG15 465 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 F13a1Q8BH61 732 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Serpinb13Q8CDC0 389 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Arl2bpQ9D385 163 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Fmnl1Q9JL26 1094 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Spdl1Q923A2 608 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ttc13A0A1L1SSC7 844 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Flot1O08917 428 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ube2oQ6ZPJ3 1288 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ripor2Q80U16 1078 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Trim7Q923T7 510 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ccnt1Q9QWV9 724 aaKnown RBP11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Kdm6aO70546 1401 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Stx2Q00262 289 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Kcnf1Q7TSH7 493 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Cyp26b1Q811W2 512 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Caps2Q8BUG5 550 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Krt20Q9D312 431 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ccdc97Q9DBT3 340 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Gja8P28236 440 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Micall2Q3TN34 1009 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Znf76Q8BMU0 568 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ccdc80Q8R2G6 949 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Snx1Q9WV80 522 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Kif21aQ9QXL2 1672 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Arhgap42B2RQE8 841 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ets1P27577 440 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Nub1P54729 614 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 DexiQ9WUQ7 95 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Efcab6Q6P1E8 1516 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Gm9774A0A0A6YVU8 407 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Mmrn1B2RPV6 1210 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Sema3fO88632 785 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Surf1P09925 306 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Atp8a1P70704 1164 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ankrd13cQ3UX43 541 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Phf20l1Q8CCJ9 1013 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Pnma3Q8JZW8 466 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Sf3a3Q9D554 501 aaKnown RBP11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Rabgap1A2AWA9 1064 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Cacna2d1O08532 1103 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Parp1P11103 1013 aaKnown RBP11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Zc3h18Q0P678 948 aaKnown RBP11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Plbd2Q3TCN2 594 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Eif2b5Q8CHW4 717 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Sde2Q8K1J5 448 aaKnown RBP11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Rwdd2aQ9D9S3 292 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Nsrp1Q5NCR9 542 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 H6pdQ8CFX1 789 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 StrbpQ91WM1 672 aaKnown RBP11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Rbm43Q99J64 343 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Adcy9P51830 1353 aa11.09□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Casq2O09161 415 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Scyl2Q8CFE4 930 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Mettl5Q8K1A0 209 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Krt36B1AQ75 473 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Stmn1P54227 149 aaKnown RBP11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Nrbf2Q8VCQ3 287 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ms4a2P20490 235 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 EsrrgP62509 458 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Zmym1Q3TJB1 983 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Trip13Q3UA06 432 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Tbc1d1Q60949 1255 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Cyp24a1Q64441 514 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Slc20a2Q80UP8 656 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ccdc40Q8BI79 1192 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Kiaa1024Q8K3V7 917 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Cyth1Q9QX11 398 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Cog1Q9Z160 980 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 CoblQ5NBX1 1337 aaKnown RBP11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Nup62clA2AG10 272 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Mybl2P48972 704 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Arhgap29Q8CGF1 1266 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Tgs1Q923W1 853 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 GsdmeQ9Z2D3 512 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Stat4P42228 749 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Catsper1Q91ZR5 686 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ccnl1Q52KE7 532 aaKnown RBP11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Fnbp1Q80TY0 616 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Haus4Q8BFT2 363 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 H2-OaQ9QWV1 250 aa11.08□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ppfia2Q8BSS9 1257 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ube3bQ9ES34 1070 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Sec24cG3X972 1096 aaKnown RBP11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Esr2O08537 530 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Sept2P42208 361 aaKnown RBP11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Fam81aQ3UXZ6 364 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Tbc1d9bQ5SVR0 1263 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Hps6Q8BLY7 805 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Nlgn1Q99K10 843 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Coro7Q9D2V7 922 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 SphkapQ6NSW3 1687 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Yeats2Q3TUF7 1407 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 1700018F24RikB2RW27 314 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Gna14P30677 355 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Polr2fP61219 127 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Nkiras1Q8CEC5 192 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Erp44Q9D1Q6 406 aa11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms