RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Dcaf17Q3TUL7 519 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 LrmpQ60664 539 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Caps2Q8BUG5 550 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 SyncQ9EPM5 470 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Stk11Q9WTK7 436 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Epb41l3Q9WV92 929 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Slc39a2G3X943 309 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Rgs9O54828 675 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Vsnl1P62761 191 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tubb4bP68372 445 aaKnown RBP12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tmem59lQ7TNI2 337 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Lrsam1Q80ZI6 727 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Bcl9Q9D219 1425 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Lrrc32G3XA59 663 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ugt1a6bK9J7B2 531 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Psd3Q2PFD7 1037 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Llgl2Q3TJ91 1027 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Eif3j1Q3UGC7 261 aaKnown RBP12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 FntaQ61239 377 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ugt1a6Q64435 531 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Eif3j2Q66JS6 263 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Dync1li2Q6PDL0 492 aaKnown RBP12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ugt1a7cQ6ZQM8 531 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Atxn2lQ7TQH0 1049 aaKnown RBP12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ptrh1Q8BW00 204 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 NelfbQ8C4Y3 580 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Lmbrd1Q8K0B2 537 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tgs1Q923W1 853 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Carmil3Q3UFQ8 1375 aa12.06□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ifi207E9Q3L4 978 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Pcif1P59114 706 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Vars2Q3U2A8 1060 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Dpf2Q61103 391 aaKnown RBP12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Usp49Q6P9L4 685 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Calml3Q9D6P8 149 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Plcb1Q9Z1B3 1216 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Nup153E9Q3G8 1462 aaKnown RBP12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Pak1O88643 545 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tmem109Q3UBX0 243 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Rab11fip4Q8BQP8 635 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 CnstQ8CBC4 711 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Usp27Q8CEG8 438 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 BaatQ91X34 420 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Luc7lQ9CYI4 371 aaKnown RBP12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Lrp2bpQ9D4C6 346 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 RictorQ6QI06 1708 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Spef2Q8C9J3 1734 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Kcnb2A6H8H5 907 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Gm1993A6X8I0 212 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 SlxD3Z347 212 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Casp12O08736 419 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Myo1aO88329 1043 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 GlmnQ8BZM1 596 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Riox2Q8CD15 465 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Mtmr6Q8VE11 617 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ebag9Q9D0V7 213 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Klhl40Q9D783 621 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Dctpp1Q9QY93 170 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Nlrp5Q9R1M5 1163 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Vstm4T1NXB5 319 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Gm5934D3Z4U6 212 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ccdc78D3Z5T1 437 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Gucy1a2F8VQK3 730 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Eef2P58252 858 aaKnown RBP12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Gjb4Q02738 266 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Sp8Q8BMJ8 486 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 VmacQ8BP01 174 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Six6os1Q9CTN5 574 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Etnk1Q9D4V0 363 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Lgr5Q9Z1P4 907 aa12.05□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ift172Q6VH22 1749 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Kiaa0232Q80U59 1396 aaKnown RBP12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Cyp3a25O09158 503 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Q3TYL0 343 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Haus7Q8BKT8 364 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 RalylQ8BTF8 293 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ankk1Q8BZ25 745 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 GlyctkQ8QZY2 523 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Pcdha12Q91Y18 950 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Smtnl1Q99LM3 459 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Cbx6Q9DBY5 414 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Pramel3A2AHA7 463 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Gm7903A2AWL1 463 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 AV320801A2AWL3 467 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Gm15023L7MUB4 467 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Epb41l2O70318 988 aaKnown RBP12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Qrich1Q3UA37 777 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Rgl1Q60695 768 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Hoxa13Q62424 386 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 GnptabQ69ZN6 1235 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 TxlnbQ8VBT1 685 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Kif1aP33173 1695 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Gm10378F6XQQ1 160 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Chmp6P0C0A3 200 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Sept2P42208 361 aaKnown RBP12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tcerg1lQ3B807 590 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Fhod1Q6P9Q4 1197 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Pwp2Q8BU03 919 aaKnown RBP12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ccdc113Q8C5T8 377 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Lrrc41Q8K1C9 807 aa12.04□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms