RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Kcna3P16390 528 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Tnnc1P19123 161 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 HpdP49429 393 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Pla2g4eQ50L42 875 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Jarid2Q62315 1234 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Arhgap30Q640N3 1101 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 KaznQ69ZS8 779 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Epn1Q80VP1 575 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ehd2Q8BH64 543 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Cplx3Q8R1B5 158 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Msantd4Q91YU3 345 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Abtb1Q99LJ2 478 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Mipol1Q9D9F8 279 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Setdb1O88974 1307 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ccdc144bE9PVZ3 520 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Eef2P58252 858 aaKnown RBP10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Slc38a10Q5I012 1090 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 HrQ61645 1182 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 HscbQ8K3A0 234 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Cabp2Q9JLK4 216 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Nphs1Q9QZS7 1256 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ppfia1B2RXQ2 1266 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Xbp1O35426 267 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Rps6ka1P18653 724 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Pcyt1aP49586 367 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Arl1P61211 181 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Map3k13Q1HKZ5 959 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Palb2Q3U0P1 1104 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Arhgap17Q3UIA2 846 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Zbtb45Q52KG4 520 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Iqcb1Q8BP00 598 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Pm20d1Q8C165 503 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Tdrd7Q8K1H1 1086 aaKnown RBP10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Lrrc42Q8R2U7 421 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Rabep2Q91WG2 554 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Map3k19E9Q3S4 1311 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Atf7ipQ7TT18 1306 aa10.19□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Zbtb16Q3UQ17 673 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ifit2Q64112 472 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Bpifb6Q8BU51 449 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Vps52Q8C754 723 aaKnown RBP10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 DpydQ8CHR6 1025 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Cfap57Q9D180 1249 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Dusp10Q9ESS0 483 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Nckap5lQ6GQX2 1323 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Itsn2Q9Z0R6 1659 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Gucy1b3O54865 620 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 PrphP15331 475 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Cbx3P23198 183 aaKnown RBP10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ankrd13cQ3UX43 541 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Fchsd1Q6PFY1 688 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Rab11fip4Q8BQP8 635 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 IrgcQ8C262 412 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Zfp113Q8C689 439 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Arhgef6Q8K4I3 771 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Dnajc17Q91WT4 303 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Wbp11Q923D5 641 aaKnown RBP10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Smtnl1Q99LM3 459 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Atp6v0a1Q9Z1G4 839 aaKnown RBP10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Gm4985A2ALC6 410 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Kcna4Q61423 654 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Adck2Q6NSR3 617 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Zranb3Q6NZP1 1069 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Cfap206Q6PE87 622 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Vipas39Q8BGQ1 491 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Lsm14bQ8CGC4 385 aaKnown RBP10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 C1qtnf12Q8R2Z0 308 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Senp2Q91ZX6 588 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Luc7lQ9CYI4 371 aaKnown RBP10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Srfbp1Q9CZ91 441 aaKnown RBP10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Scrn1Q9CZC8 414 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Arpc5lQ9D898 153 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Chmp6P0C0A3 200 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Hddc2Q3SXD3 199 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Prkag3Q8BGM7 489 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Tcp11l2Q8K1H7 517 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Hs2st1Q8R3H7 356 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Batf3Q9D275 118 aa10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Noc2lQ9WV70 747 aaKnown RBP10.18□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Rgs12Q8CGE9 1381 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Nol4P60954 483 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Lrfn1Q2WF71 766 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Rhpn1Q61085 643 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 PnocQ64387 187 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 U2af1l4Q8BGJ9 220 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 OplahQ8K010 1288 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Klrb1fQ8VD98 217 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Klhdc4Q921I2 584 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 NptxrQ99J85 493 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Syf2Q9D198 242 aaKnown RBP10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Fam217aQ9D9W6 419 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 PtprcP06800 1291 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Fam169aQ5XG69 665 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ndc80Q9D0F1 642 aaKnown RBP10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Sycp2lA0A0M3U1B0 842 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Palm3A2TJV2 734 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Xirp1O70373 1129 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Gfpt1P47856 697 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Traf5P70191 558 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Cep126Q0VBV7 1103 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms