RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 9230110C19RikQ8CC70 267 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 HmcesQ8R1M0 353 aaKnown RBP13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 WtapQ9ER69 396 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 FignQ9ERZ6 759 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 GdaQ9R111 454 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Nav1Q8CH77 1875 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Gm43738A0A0G2JEA5 862 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Hnrnph3D3Z3N4 346 aaKnown RBP13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Opa1P58281 960 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Kcnb1Q03717 857 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Trappc10Q3TLI0 1259 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Erich4Q3UNU4 136 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Zcwpw1Q6IR42 630 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Ccdc148Q6P5U8 527 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Aggf1Q7TN31 711 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Tmem63cQ8CBX0 802 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Zbtb1Q91VL9 713 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Lztr1Q9CQ33 837 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Suclg2Q9Z2I8 433 aa13.45□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Znf609Q8BZ47 1413 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Ap1g2O88512 791 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Tcp1P11983 556 aaKnown RBP13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Eif3j1Q3UGC7 261 aaKnown RBP13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Cracr2aQ3UP38 310 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 1810065E05RikQ5NC41 235 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 EsrrbQ61539 433 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Eif3j2Q66JS6 263 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Glis3Q6XP49 780 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Kif1bpQ6ZPU9 617 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Phf8Q80TJ7 1023 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Fbxo18Q8K2I9 1042 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 CerkQ8K4Q7 531 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Prpf3Q922U1 683 aaKnown RBP13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Mrps5Q99N87 432 aaKnown RBP13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Scrn1Q9CZC8 414 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Mss51Q9D5Z5 446 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Plch1Q4KWH5 1682 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Ankrd31A0A140LI88 1765 aa13.44□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Gm28042B7ZCM9 1014 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Zbtb21E9Q444 1094 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 NapbP28663 298 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Gnat2P50149 354 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Srp68Q8BMA6 625 aaKnown RBP13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Ttc12Q8BW49 704 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Tango6Q8C3S2 1079 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Eps8l1Q8R5F8 716 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Ubxn6Q99PL6 442 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Ndufab1Q9CR21 156 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 KynuQ9CXF0 464 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Nip7Q9CXK8 180 aaKnown RBP13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Col4a1P02463 1669 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Vmn2r78K7N6U5 853 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Sept1P42209 366 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Atp1b3P97370 278 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Flt3Q00342 1000 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Myl10Q62082 202 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Cnga2Q62398 664 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 AarsQ8BGQ7 968 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Rnf41Q8BH75 317 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Lmod1Q8BVA4 595 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Terb1Q8C0V1 768 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Mylk2Q8VCR8 613 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Alg1Q921Q3 482 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Syce1Q9D495 329 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Lztfl1Q9JHQ5 299 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Foxo3Q9WVH4 672 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Greb1lB9EJV3 1913 aa13.43□□□□□ -0.26
Ufd1-201ENSMUST00000005394 AfdnQ9QZQ1 1820 aaKnown RBP13.42□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Herc3A6H6S0 1050 aa13.42□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Sec23aQ01405 765 aa13.42□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Clca2Q8BG22 942 aa13.42□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Larp6Q8BN59 492 aa13.42□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Synpo2Q91YE8 1087 aaKnown RBP13.42□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Smco2Q9DA21 347 aa13.42□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Mrpl12Q9DB15 201 aaKnown RBP13.42□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Plekho1Q9JIY0 408 aa13.42□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Tob2Q9JM55 345 aa13.42□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Gkap1Q9JMB0 366 aa13.42□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Psma7Q9Z2U0 248 aa13.42□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Gm28919A0A087WP35 240 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Gpr182P43142 395 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 GclcP97494 637 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Gtf2f1Q3THK3 508 aaKnown RBP13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Gm12185Q5NCB2 835 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Kiaa1211Q5PR69 1207 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 PodnQ7TQ62 611 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Rufy1Q8BIJ7 712 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Rassf2Q8BMS9 326 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Setdb2Q8C267 713 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Spice1Q8C804 860 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Ces1dQ8VCT4 565 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Sgpp1Q9JI99 430 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Trip6Q9Z1Y4 480 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 JcadQ5DTX6 1320 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Zfyve9A2A8R0 1397 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Odf2A3KGV1 830 aaKnown RBP13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Trim30cD3YVI9 513 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Gm5934D3Z4U6 212 aa13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Cct6aP80317 531 aaKnown RBP13.41□□□□□ -0.26
Ufd1-201ENSMUST00000005394 Lig3P97386 1015 aa13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms