RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Pspc1Q8R326 523 aaKnown RBP18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Trp53inp1Q9QXE4 239 aa18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Prpf40bQ80W14 870 aa18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Znf131Q8K3J5 619 aa18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Chd5A2A8L1 1946 aa18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Ltbp1Q8CG19 1712 aa18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Krt222Q8CCX5 294 aa18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Mrpl12Q9DB15 201 aaKnown RBP18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Myo1cQ9WTI7 1063 aa18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Knop1Q9Z2Q2 478 aaKnown RBP18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Plekhg2Q6KAU7 1340 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Cnbd1B1AWM0 430 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Lrrc4bP0C192 709 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Kcna1P16388 495 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Zdhhc14Q8BQQ1 489 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Rasgrp4Q8BTM9 673 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Usp27Q8CEG8 438 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Amhr2Q8K592 568 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Slc44a4Q91VA1 707 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Slfn1Q9Z0I7 337 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Slc39a2G3X943 309 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Carmil2Q3V3V9 1296 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Rbm12b2Q66JV4 834 aaKnown RBP18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Ttc26Q8BS45 554 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Kif2bQ8C0N1 668 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Ildr1Q8CBR1 537 aa18.4■□□□□ 0.54
Shh-201ENSMUST00000002708 Serpina16D3Z660 418 aa18.39■□□□□ 0.53
Shh-201ENSMUST00000002708 Aknad1E9Q8N6 675 aa18.39■□□□□ 0.53
Shh-201ENSMUST00000002708 Skap2Q3UND0 358 aa18.39■□□□□ 0.53
Shh-201ENSMUST00000002708 Gja3Q64448 417 aa18.39■□□□□ 0.53
Shh-201ENSMUST00000002708 GypcQ78HU7 95 aa18.39■□□□□ 0.53
Shh-201ENSMUST00000002708 AllcQ9JHX6 414 aa18.39■□□□□ 0.53
Shh-201ENSMUST00000002708 Tmem47Q9JJG6 181 aa18.39■□□□□ 0.53
Shh-201ENSMUST00000002708 Capza3P70190 299 aa18.39■□□□□ 0.53
Shh-201ENSMUST00000002708 Fxr1Q61584 677 aaKnown RBP18.39■□□□□ 0.53
Shh-201ENSMUST00000002708 Irak1Q62406 710 aa18.39■□□□□ 0.53
Shh-201ENSMUST00000002708 Arpp21Q9DCB4 807 aa18.39■□□□□ 0.53
Shh-201ENSMUST00000002708 Lztfl1Q9JHQ5 299 aa18.39■□□□□ 0.53
Shh-201ENSMUST00000002708 Nr2e3Q9QXZ7 395 aa18.39■□□□□ 0.53
Shh-201ENSMUST00000002708 Tex13cD3YU32 604 aa18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 Akr1c19G3X9Y6 323 aa18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 Kif22Q3V300 660 aa18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 Prpf38aQ4FK66 312 aaKnown RBP18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 Exoc8Q6PGF7 716 aa18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 Afg3l2Q8JZQ2 802 aaKnown RBP18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 HibadhQ99L13 335 aaKnown RBP18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 AdarQ99MU3 1178 aaKnown RBP18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 Homer1Q9Z2Y3 366 aa18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 Ddx23D3Z0M9 819 aaKnown RBP18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 Prl2c3P04768 224 aa18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 ItgadQ3V0T4 1168 aa18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 Secisbp2lQ6A098 1086 aaKnown RBP18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 Txndc16Q7TN22 820 aa18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 Tbc1d23Q8K0F1 684 aa18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 Ltbp2O08999 1813 aa18.38■□□□□ 0.53
Shh-201ENSMUST00000002708 Tmem132bF7BAB2 1078 aa18.37■□□□□ 0.53
Shh-201ENSMUST00000002708 Cct6bQ61390 531 aa18.37■□□□□ 0.53
Shh-201ENSMUST00000002708 Tmem63cQ8CBX0 802 aa18.37■□□□□ 0.53
Shh-201ENSMUST00000002708 Eps8l1Q8R5F8 716 aa18.37■□□□□ 0.53
Shh-201ENSMUST00000002708 Otud7bB2RUR8 840 aa18.37■□□□□ 0.53
Shh-201ENSMUST00000002708 Gas1Q01721 343 aa18.37■□□□□ 0.53
Shh-201ENSMUST00000002708 Top1Q04750 767 aaKnown RBP18.37■□□□□ 0.53
Shh-201ENSMUST00000002708 VrtnQ3SYK4 740 aa18.37■□□□□ 0.53
Shh-201ENSMUST00000002708 Cep95Q8BVV7 827 aa18.37■□□□□ 0.53
Shh-201ENSMUST00000002708 Fermt2Q8CIB5 680 aa18.37■□□□□ 0.53
Shh-201ENSMUST00000002708 Spata4Q8K3V1 295 aa18.37■□□□□ 0.53
Shh-201ENSMUST00000002708 Mss51Q9D5Z5 446 aa18.37■□□□□ 0.53
Shh-201ENSMUST00000002708 Trap1aP19473 224 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Gfpt1P47856 697 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Antxr2Q6DFX2 487 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Matr3Q8K310 846 aaKnown RBP18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Q91WD4 421 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Abhd2Q9QXM0 425 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Tsc2Q61037 1814 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Alppl2P24823 529 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Gpbp1Q6NXH3 473 aaKnown RBP18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Bpifb6Q8BU51 449 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Tango6Q8C3S2 1079 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Leng8Q8CBY3 785 aaKnown RBP18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Slc51aQ8R000 340 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Grin3bQ91ZU9 1003 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Mmtag2Q99LX5 260 aaKnown RBP18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Arhgap33Q80YF9 1305 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Klra1P20937 262 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Aco1P28271 889 aaKnown RBP18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Pla2g4aP47713 748 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Ezh2Q61188 746 aaKnown RBP18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Tfap4Q9JIZ5 338 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Prl2c5Q9JLV9 222 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Pex3Q9QXY9 372 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Sel1lQ9Z2G6 790 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 Psmd10Q9Z2X2 231 aa18.36■□□□□ 0.53
Shh-201ENSMUST00000002708 ErmardE9Q048 622 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 Krt78E9Q0F0 1068 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 DnttP09838 530 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 Cdr2P97817 455 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 Pabpc4Q6PHQ9 660 aaKnown RBP18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 Aggf1Q7TN31 711 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 LRWD1Q8BUI3 648 aaKnown RBP18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 Hps4Q99KG7 671 aa18.35■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms