RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W VPS25P47142 202 aa2.49□□□□□ -2.01
BRO1YPL084W YPT11P48559 417 aa2.49□□□□□ -2.01
BRO1YPL084W VPS75P53853 264 aa2.49□□□□□ -2.01
BRO1YPL084W RPT6Q01939 405 aaKnown RBP2.49□□□□□ -2.01
BRO1YPL084W YMR178WQ03219 274 aaKnown RBP2.49□□□□□ -2.01
BRO1YPL084W DPB4Q04603 196 aaKnown RBP2.49□□□□□ -2.01
BRO1YPL084W LUC7Q07508 261 aaPredicted RBP2.49□□□□□ -2.01
BRO1YPL084W YEH1Q07804 573 aa2.49□□□□□ -2.01
BRO1YPL084W KRS1P15180 591 aaKnown RBP2.48□□□□□ -2.01
BRO1YPL084W CLB2P24869 491 aa2.48□□□□□ -2.01
BRO1YPL084W RGI2P40188 164 aa2.48□□□□□ -2.01
BRO1YPL084W LTP1P40347 161 aa2.48□□□□□ -2.01
BRO1YPL084W LEU9Q12166 604 aaKnown RBP2.48□□□□□ -2.01
BRO1YPL084W YPT6Q99260 215 aa2.48□□□□□ -2.01
BRO1YPL084W CDC31P06704 161 aaKnown RBP2.48□□□□□ -2.01
BRO1YPL084W UBP11P36026 717 aa2.48□□□□□ -2.01
BRO1YPL084W REG2P38232 338 aa2.48□□□□□ -2.01
BRO1YPL084W RFC1P38630 861 aaKnown RBP2.48□□□□□ -2.01
BRO1YPL084W NOC2P39744 710 aaKnown RBP2.48□□□□□ -2.01
BRO1YPL084W VRG4P40107 337 aa2.48□□□□□ -2.01
BRO1YPL084W MAF1P41910 395 aa2.48□□□□□ -2.01
BRO1YPL084W PTR3P43606 678 aa2.48□□□□□ -2.01
BRO1YPL084W RMD8P43620 662 aa2.48□□□□□ -2.01
BRO1YPL084W SGF73P53165 657 aa2.48□□□□□ -2.01
BRO1YPL084W STP1Q00947 519 aa2.48□□□□□ -2.01
BRO1YPL084W YML122CQ03207 126 aa2.48□□□□□ -2.01
BRO1YPL084W EMI2Q04409 500 aaKnown RBP2.48□□□□□ -2.01
BRO1YPL084W TEN1Q07921 160 aa2.48□□□□□ -2.01
BRO1YPL084W YLR112WQ12130 139 aa2.48□□□□□ -2.01
BRO1YPL084W PGS1P25578 521 aa2.47□□□□□ -2.01
BRO1YPL084W SYN8P31377 255 aa2.47□□□□□ -2.01
BRO1YPL084W SSE2P32590 693 aaKnown RBP2.47□□□□□ -2.01
BRO1YPL084W YBR144CP34215 104 aa2.47□□□□□ -2.01
BRO1YPL084W SRO77P38163 1010 aa2.47□□□□□ -2.01
BRO1YPL084W TSC10P38342 320 aa2.47□□□□□ -2.01
BRO1YPL084W CCT6P39079 546 aa2.47□□□□□ -2.01
BRO1YPL084W DOT5P40553 215 aa2.47□□□□□ -2.01
BRO1YPL084W MRPL19P53875 158 aa2.47□□□□□ -2.01
BRO1YPL084W EFM6P53970 246 aa2.47□□□□□ -2.01
BRO1YPL084W VTC3Q02725 835 aa2.47□□□□□ -2.01
BRO1YPL084W POS5Q06892 414 aa2.47□□□□□ -2.01
BRO1YPL084W GRC3Q07845 632 aa2.47□□□□□ -2.01
BRO1YPL084W BUD7Q08754 746 aa2.47□□□□□ -2.01
BRO1YPL084W FMP40Q08968 688 aaPredicted RBP2.47□□□□□ -2.01
BRO1YPL084W MF(ALPHA)1P01149 165 aa2.47□□□□□ -2.01
BRO1YPL084W YER190C-BP0CX94 160 aa2.47□□□□□ -2.01
BRO1YPL084W YEL077W-AP0CX95 160 aa2.47□□□□□ -2.01
BRO1YPL084W YGR296C-BP0CX96 160 aa2.47□□□□□ -2.01
BRO1YPL084W YPL283W-BP0CX97 160 aa2.47□□□□□ -2.01
BRO1YPL084W YPR204C-AP0CX98 160 aa2.47□□□□□ -2.01
BRO1YPL084W ECM32P32644 1121 aaKnown RBP2.47□□□□□ -2.01
BRO1YPL084W MIA40P36046 403 aa2.47□□□□□ -2.01
BRO1YPL084W JNM1P36224 373 aa2.47□□□□□ -2.01
BRO1YPL084W STV1P37296 890 aa2.47□□□□□ -2.01
BRO1YPL084W DBP8P38719 431 aa2.47□□□□□ -2.01
BRO1YPL084W TOM71P38825 639 aaKnown RBP2.47□□□□□ -2.01
BRO1YPL084W SPO22P40511 975 aa2.47□□□□□ -2.01
BRO1YPL084W YIL060WP40519 144 aa2.47□□□□□ -2.01
BRO1YPL084W SGN1P40561 250 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
BRO1YPL084W HXT9P40885 567 aa2.47□□□□□ -2.01
BRO1YPL084W SGM1P47166 707 aa2.47□□□□□ -2.01
BRO1YPL084W LYS20P48570 428 aaKnown RBP2.47□□□□□ -2.01
BRO1YPL084W RPL15BP54780 204 aaPredicted RBP2.47□□□□□ -2.01
BRO1YPL084W ATG26Q06321 1198 aa2.47□□□□□ -2.01
BRO1YPL084W ECM30Q06673 1274 aa2.47□□□□□ -2.01
BRO1YPL084W ATX2Q12067 313 aa2.47□□□□□ -2.01
BRO1YPL084W HER1Q12276 1246 aa2.47□□□□□ -2.01
BRO1YPL084W YPR089WO13585 888 aa2.46□□□□□ -2.01
BRO1YPL084W ARG3P05150 338 aa2.46□□□□□ -2.01
BRO1YPL084W CBP1P07252 654 aa2.46□□□□□ -2.01
BRO1YPL084W RPB8P20436 146 aa2.46□□□□□ -2.01
BRO1YPL084W IMG1P25626 169 aa2.46□□□□□ -2.01
BRO1YPL084W ICS2P38284 255 aa2.46□□□□□ -2.01
BRO1YPL084W ARF3P40994 183 aaRIP-Chip data2.46□□□□□ -2.01 RIP-Chip
BRO1YPL084W GAT1P43574 510 aa2.46□□□□□ -2.01
BRO1YPL084W IRC6P43615 237 aa2.46□□□□□ -2.01
BRO1YPL084W FAR3P46671 204 aa2.46□□□□□ -2.01
BRO1YPL084W RPS10BP46784 105 aaKnown RBP2.46□□□□□ -2.01
BRO1YPL084W YGR127WP53275 312 aa2.46□□□□□ -2.01
BRO1YPL084W IPI3P53877 555 aa2.46□□□□□ -2.01
BRO1YPL084W CAC2Q04199 468 aa2.46□□□□□ -2.01
BRO1YPL084W RPC11Q04307 110 aaPredicted RBP2.46□□□□□ -2.01
BRO1YPL084W ARP10Q04549 284 aa2.46□□□□□ -2.01
BRO1YPL084W ADE13Q05911 482 aaKnown RBP2.46□□□□□ -2.01
BRO1YPL084W RTT109Q07794 436 aa2.46□□□□□ -2.01
BRO1YPL084W RPS10AQ08745 105 aaPredicted RBP2.46□□□□□ -2.01
BRO1YPL084W YJR112W-AQ3E743 109 aa2.46□□□□□ -2.01
BRO1YPL084W SGS1P35187 1447 aa2.46□□□□□ -2.02
BRO1YPL084W ARG81P05085 880 aa2.46□□□□□ -2.02
BRO1YPL084W PUP3P25451 205 aaKnown RBP2.46□□□□□ -2.02
BRO1YPL084W ARP1P38696 384 aa2.46□□□□□ -2.02
BRO1YPL084W SRB7P47822 140 aa2.46□□□□□ -2.02
BRO1YPL084W VID30P53076 958 aa2.46□□□□□ -2.02
BRO1YPL084W ERG26P53199 349 aaKnown RBP2.46□□□□□ -2.02
BRO1YPL084W RSM23Q01163 450 aa2.46□□□□□ -2.02
BRO1YPL084W VPS38Q05919 439 aa2.46□□□□□ -2.02
BRO1YPL084W MCP2Q06567 569 aa2.46□□□□□ -2.02
BRO1YPL084W GSH2Q08220 491 aa2.46□□□□□ -2.02
BRO1YPL084W GAL80P04387 435 aa2.45□□□□□ -2.02
BRO1YPL084W MET17P06106 444 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms