RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	MIC60	P36112	540 aa		2.72	□□□□□ -1.97
PKR1	YMR123W	PSY4	P38193	441 aa		2.72	□□□□□ -1.97
PKR1	YMR123W	ERG7	P38604	731 aa		2.72	□□□□□ -1.97
PKR1	YMR123W	DIA4	P38705	446 aa	Predicted RBP	2.72	□□□□□ -1.97
PKR1	YMR123W	IES5	P40060	125 aa		2.72	□□□□□ -1.97
PKR1	YMR123W	SLZ1	P40167	298 aa		2.72	□□□□□ -1.97
PKR1	YMR123W	AZF1	P41696	914 aa		2.72	□□□□□ -1.97
PKR1	YMR123W	GUF1	P46943	645 aa		2.72	□□□□□ -1.97
PKR1	YMR123W	PKP2	P53170	491 aa		2.72	□□□□□ -1.97
PKR1	YMR123W	MUB1	Q03162	620 aa		2.72	□□□□□ -1.97
PKR1	YMR123W	SCW10	Q04951	389 aa		2.72	□□□□□ -1.97
PKR1	YMR123W	ADE13	Q05911	482 aa	Known RBP	2.72	□□□□□ -1.97
PKR1	YMR123W	TRM8	Q12009	286 aa		2.72	□□□□□ -1.97
PKR1	YMR123W	DAP1	Q12091	152 aa		2.72	□□□□□ -1.97
PKR1	YMR123W	CSR2	Q12734	1121 aa		2.72	□□□□□ -1.97
PKR1	YMR123W	SPE2	P21182	396 aa		2.71	□□□□□ -1.98
PKR1	YMR123W	PGS1	P25578	521 aa		2.71	□□□□□ -1.98
PKR1	YMR123W	SPC34	P36131	295 aa		2.71	□□□□□ -1.98
PKR1	YMR123W	YNG2	P38806	282 aa	Known RBP	2.71	□□□□□ -1.98
PKR1	YMR123W	DIM1	P41819	318 aa	Known RBP	2.71	□□□□□ -1.98
PKR1	YMR123W	PIL1	P53252	339 aa	Known RBP	2.71	□□□□□ -1.98
PKR1	YMR123W	SOL4	P53315	255 aa		2.71	□□□□□ -1.98
PKR1	YMR123W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
PKR1	YMR123W	GTR1	Q00582	310 aa		2.71	□□□□□ -1.98
PKR1	YMR123W	TMA64	Q04600	565 aa	Known RBP	2.71	□□□□□ -1.98
PKR1	YMR123W	TIP41	Q12199	356 aa		2.71	□□□□□ -1.98
PKR1	YMR123W	LCB1	P25045	558 aa	Known RBP	2.7	□□□□□ -1.98
PKR1	YMR123W	MRP20	P32387	263 aa		2.7	□□□□□ -1.98
PKR1	YMR123W	PDB1	P32473	366 aa	Known RBP	2.7	□□□□□ -1.98
PKR1	YMR123W	ERG1	P32476	496 aa	Known RBP	2.7	□□□□□ -1.98
PKR1	YMR123W	CBF2	P32504	956 aa		2.7	□□□□□ -1.98
PKR1	YMR123W	MRS6	P32864	603 aa	Known RBP	2.7	□□□□□ -1.98
PKR1	YMR123W	PHD1	P36093	366 aa		2.7	□□□□□ -1.98
PKR1	YMR123W	UBA4	P38820	440 aa		2.7	□□□□□ -1.98
PKR1	YMR123W	YJR008W	P47085	338 aa		2.7	□□□□□ -1.98
PKR1	YMR123W	SGM1	P47166	707 aa		2.7	□□□□□ -1.98
PKR1	YMR123W	YGR021W	P53212	290 aa		2.7	□□□□□ -1.98
PKR1	YMR123W	SKG3	Q06315	1026 aa		2.7	□□□□□ -1.98
PKR1	YMR123W	RDR1	Q08904	546 aa		2.7	□□□□□ -1.98
PKR1	YMR123W	YBR298C-A	Q8TGK4	73 aa		2.7	□□□□□ -1.98
PKR1	YMR123W	SWR1	Q05471	1514 aa		2.69	□□□□□ -1.98
PKR1	YMR123W	SLC1	P33333	303 aa		2.69	□□□□□ -1.98
PKR1	YMR123W	ALY1	P36117	915 aa		2.69	□□□□□ -1.98
PKR1	YMR123W	YER130C	P39959	443 aa		2.69	□□□□□ -1.98
PKR1	YMR123W	YER010C	P40011	234 aa		2.69	□□□□□ -1.98
PKR1	YMR123W	FMP10	P40098	244 aa		2.69	□□□□□ -1.98
PKR1	YMR123W	AAD10	P47182	288 aa		2.69	□□□□□ -1.98
PKR1	YMR123W	STR3	P53101	465 aa	Known RBP	2.69	□□□□□ -1.98
PKR1	YMR123W	INN1	P53901	409 aa		2.69	□□□□□ -1.98
PKR1	YMR123W	ATG16	Q03818	150 aa		2.69	□□□□□ -1.98
PKR1	YMR123W	MSS11	Q03825	758 aa		2.69	□□□□□ -1.98
PKR1	YMR123W	NBP2	Q12163	236 aa		2.69	□□□□□ -1.98
PKR1	YMR123W	ARP6	Q12509	438 aa		2.69	□□□□□ -1.98
PKR1	YMR123W	YOL087C	Q99247	1116 aa		2.69	□□□□□ -1.98
PKR1	YMR123W	PUT2	P07275	575 aa		2.68	□□□□□ -1.98
PKR1	YMR123W	SNF3	P10870	884 aa		2.68	□□□□□ -1.98
PKR1	YMR123W	PDA1	P16387	420 aa	Known RBP	2.68	□□□□□ -1.98
PKR1	YMR123W	TYR1	P20049	452 aa		2.68	□□□□□ -1.98
PKR1	YMR123W	MCM4	P30665	933 aa	Known RBP	2.68	□□□□□ -1.98
PKR1	YMR123W	SNC1	P31109	117 aa		2.68	□□□□□ -1.98
PKR1	YMR123W	PRO3	P32263	286 aa	Known RBP	2.68	□□□□□ -1.98
PKR1	YMR123W	TSC10	P38342	320 aa		2.68	□□□□□ -1.98
PKR1	YMR123W	RRP3	P38712	501 aa	Known RBP	2.68	□□□□□ -1.98
PKR1	YMR123W	AXL2	P38928	823 aa		2.68	□□□□□ -1.98
PKR1	YMR123W	DHH1	P39517	506 aa	Known RBP	2.68	□□□□□ -1.98
PKR1	YMR123W	KAP123	P40069	1113 aa	Known RBP	2.68	□□□□□ -1.98
PKR1	YMR123W	YJR061W	P40355	935 aa		2.68	□□□□□ -1.98
PKR1	YMR123W	YJL068C	P40363	299 aa		2.68	□□□□□ -1.98
PKR1	YMR123W	IMP4	P53941	290 aa	Known RBP	2.68	□□□□□ -1.98
PKR1	YMR123W	VMS1	Q04311	632 aa	Known RBP	2.68	□□□□□ -1.98
PKR1	YMR123W	EMI2	Q04409	500 aa	Known RBP	2.68	□□□□□ -1.98
PKR1	YMR123W	SNO4	Q04902	237 aa		2.68	□□□□□ -1.98
PKR1	YMR123W	HCR1	Q05775	265 aa	Known RBP	2.68	□□□□□ -1.98
PKR1	YMR123W	PSR1	Q07800	427 aa		2.68	□□□□□ -1.98
PKR1	YMR123W	ETT1	Q08421	412 aa	Known RBP	2.68	□□□□□ -1.98
PKR1	YMR123W	HSP33	Q08914	237 aa	Known RBP	2.68	□□□□□ -1.98
PKR1	YMR123W	HSP32	Q08992	237 aa		2.68	□□□□□ -1.98
PKR1	YMR123W	PPT2	Q12036	173 aa		2.68	□□□□□ -1.98
PKR1	YMR123W	ARG81	P05085	880 aa		2.67	□□□□□ -1.98
PKR1	YMR123W	PWP1	P21304	576 aa	Known RBP	2.67	□□□□□ -1.98
PKR1	YMR123W	ADH7	P25377	361 aa		2.67	□□□□□ -1.98
PKR1	YMR123W	PWP2	P25635	923 aa	Known RBP	2.67	□□□□□ -1.98
PKR1	YMR123W	CMK1	P27466	446 aa	Known RBP	2.67	□□□□□ -1.98
PKR1	YMR123W	VPS24	P36095	224 aa	Known RBP	2.67	□□□□□ -1.98
PKR1	YMR123W	ANS1	P38832	159 aa		2.67	□□□□□ -1.98
PKR1	YMR123W	RTS1	P38903	757 aa		2.67	□□□□□ -1.98
PKR1	YMR123W	ELO1	P39540	310 aa		2.67	□□□□□ -1.98
PKR1	YMR123W	BUR6	P40096	142 aa		2.67	□□□□□ -1.98
PKR1	YMR123W	YTA12	P40341	825 aa		2.67	□□□□□ -1.98
PKR1	YMR123W	RPS10B	P46784	105 aa	Known RBP	2.67	□□□□□ -1.98
PKR1	YMR123W	RPS7B	P48164	190 aa	Known RBP	2.67	□□□□□ -1.98
PKR1	YMR123W	DIA3	P52290	468 aa		2.67	□□□□□ -1.98
PKR1	YMR123W	PYK2	P52489	506 aa	Known RBP	2.67	□□□□□ -1.98
PKR1	YMR123W	TDA7	P53882	636 aa	Predicted RBP	2.67	□□□□□ -1.98
PKR1	YMR123W	YEH2	Q07950	538 aa		2.67	□□□□□ -1.98
PKR1	YMR123W	KOG1	P38873	1557 aa		2.66	□□□□□ -1.98
PKR1	YMR123W	MRS3	P10566	314 aa		2.66	□□□□□ -1.98
PKR1	YMR123W	ACH1	P32316	526 aa		2.66	□□□□□ -1.98
PKR1	YMR123W	KTR3	P38130	404 aa	Predicted RBP	2.66	□□□□□ -1.98
PKR1	YMR123W	LAG1	P38703	411 aa		2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms