RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C ARP1P38696 384 aa2.98□□□□□ -1.93
NMD2YHR077C GTS1P40956 396 aa2.98□□□□□ -1.93
NMD2YHR077C PET130P47065 347 aa2.98□□□□□ -1.93
NMD2YHR077C BOL2P53082 120 aa2.98□□□□□ -1.93
NMD2YHR077C YGR016WP53209 190 aa2.98□□□□□ -1.93
NMD2YHR077C IBD2P53892 351 aa2.98□□□□□ -1.93
NMD2YHR077C YNL010WP53981 241 aaKnown RBP2.98□□□□□ -1.93
NMD2YHR077C HSP31Q04432 237 aa2.98□□□□□ -1.93
NMD2YHR077C NSP1P14907 823 aaKnown RBP2.98□□□□□ -1.93
NMD2YHR077C CIN8P27895 1000 aa2.98□□□□□ -1.93
NMD2YHR077C HEM3P28789 327 aa2.98□□□□□ -1.93
NMD2YHR077C PTP2P29461 750 aa2.98□□□□□ -1.93
NMD2YHR077C NDI1P32340 513 aa2.98□□□□□ -1.93
NMD2YHR077C IMP3P32899 183 aaPredicted RBP2.98□□□□□ -1.93
NMD2YHR077C SCD5P34758 872 aa2.98□□□□□ -1.93
NMD2YHR077C YHR045WP38775 560 aa2.98□□□□□ -1.93
NMD2YHR077C SHU2P38957 223 aa2.98□□□□□ -1.93
NMD2YHR077C YIR016WP40572 265 aa2.98□□□□□ -1.93
NMD2YHR077C SAP4P53036 818 aa2.98□□□□□ -1.93
NMD2YHR077C RMR1P53060 241 aa2.98□□□□□ -1.93
NMD2YHR077C GET1P53192 235 aa2.98□□□□□ -1.93
NMD2YHR077C IGO1P53897 168 aa2.98□□□□□ -1.93
NMD2YHR077C YNL033WP53964 284 aa2.98□□□□□ -1.93
NMD2YHR077C YNL019CP53975 284 aa2.98□□□□□ -1.93
NMD2YHR077C MPS1P54199 764 aa2.98□□□□□ -1.93
NMD2YHR077C ARP4P80428 489 aa2.98□□□□□ -1.93
NMD2YHR077C YML131WQ03102 365 aa2.98□□□□□ -1.93
NMD2YHR077C PIR1Q03178 341 aa2.98□□□□□ -1.93
NMD2YHR077C EMI1Q04406 187 aa2.98□□□□□ -1.93
NMD2YHR077C SEC10Q06245 871 aa2.98□□□□□ -1.93
NMD2YHR077C BCP1Q06338 283 aa2.98□□□□□ -1.93
NMD2YHR077C CRN1Q06440 651 aa2.98□□□□□ -1.93
NMD2YHR077C MCP2Q06567 569 aa2.98□□□□□ -1.93
NMD2YHR077C NSE1Q07913 336 aa2.98□□□□□ -1.93
NMD2YHR077C PGC1Q08959 321 aa2.98□□□□□ -1.93
NMD2YHR077C TRP3P00937 484 aa2.97□□□□□ -1.93
NMD2YHR077C COR1P07256 457 aa2.97□□□□□ -1.93
NMD2YHR077C SNF4P12904 322 aa2.97□□□□□ -1.93
NMD2YHR077C PMA2P19657 947 aa2.97□□□□□ -1.93
NMD2YHR077C CSM1P25651 190 aa2.97□□□□□ -1.93
NMD2YHR077C VPH1P32563 840 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C PEX6P33760 1030 aa2.97□□□□□ -1.93
NMD2YHR077C CAF4P36130 643 aa2.97□□□□□ -1.93
NMD2YHR077C YBR241CP38142 488 aa2.97□□□□□ -1.93
NMD2YHR077C LDB7P38210 180 aa2.97□□□□□ -1.93
NMD2YHR077C DSS1P39112 969 aa2.97□□□□□ -1.93
NMD2YHR077C YEN1P40028 759 aa2.97□□□□□ -1.93
NMD2YHR077C RLP7P40693 322 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C FRE4P53746 719 aa2.97□□□□□ -1.93
NMD2YHR077C PEX13P80667 386 aa2.97□□□□□ -1.93
NMD2YHR077C REG1Q00816 1014 aa2.97□□□□□ -1.93
NMD2YHR077C MTD1Q02046 320 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C YPL034WQ03083 165 aa2.97□□□□□ -1.93
NMD2YHR077C RAD30Q04049 632 aa2.97□□□□□ -1.93
NMD2YHR077C SPC2Q04969 178 aa2.97□□□□□ -1.93
NMD2YHR077C YCS4Q06156 1176 aa2.97□□□□□ -1.93
NMD2YHR077C YDL121CQ07541 149 aa2.97□□□□□ -1.93
NMD2YHR077C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
NMD2YHR077C SLF1Q12034 447 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C SVS1Q12254 260 aa2.97□□□□□ -1.93
NMD2YHR077C YPL119C-AQ3E751 87 aa2.97□□□□□ -1.93
NMD2YHR077C HXK2P04807 486 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C SUI3P09064 285 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C RPS4AP0CX35 261 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C RPS4BP0CX36 261 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C ATR1P13090 542 aa2.97□□□□□ -1.93
NMD2YHR077C CCA1P21269 546 aa2.97□□□□□ -1.93
NMD2YHR077C URE2P23202 354 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C CTR86P25355 563 aa2.97□□□□□ -1.93
NMD2YHR077C OCA4P25366 362 aa2.97□□□□□ -1.93
NMD2YHR077C TSA1P34760 196 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C EMC3P36039 253 aa2.97□□□□□ -1.93
NMD2YHR077C YBR259WP38338 688 aa2.97□□□□□ -1.93
NMD2YHR077C HSE1P38753 452 aa2.97□□□□□ -1.93
NMD2YHR077C FAD1P38913 306 aa2.97□□□□□ -1.93
NMD2YHR077C IMA5P40884 581 aa2.97□□□□□ -1.93
NMD2YHR077C FKH2P41813 862 aa2.97□□□□□ -1.93
NMD2YHR077C SPO74P45819 413 aa2.97□□□□□ -1.93
NMD2YHR077C YNR063WP53749 607 aa2.97□□□□□ -1.93
NMD2YHR077C TOF2Q02208 771 aa2.97□□□□□ -1.93
NMD2YHR077C YPL014WQ02606 381 aa2.97□□□□□ -1.93
NMD2YHR077C PET117Q02771 107 aa2.97□□□□□ -1.93
NMD2YHR077C TAF12Q03761 539 aa2.97□□□□□ -1.93
NMD2YHR077C MRI1Q06489 411 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C YLR012CQ07927 99 aa2.97□□□□□ -1.93
NMD2YHR077C YLR049CQ12110 428 aa2.97□□□□□ -1.93
NMD2YHR077C PST1Q12355 444 aa2.97□□□□□ -1.93
NMD2YHR077C CCH1P50077 2039 aa2.97□□□□□ -1.93
NMD2YHR077C HTA2P04912 132 aa2.97□□□□□ -1.93
NMD2YHR077C SPB1P25582 841 aaPredicted RBP2.97□□□□□ -1.93
NMD2YHR077C PAT1P25644 796 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C TOM20P35180 183 aa2.97□□□□□ -1.93
NMD2YHR077C YKR078WP36158 585 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C OCA5P38738 679 aa2.97□□□□□ -1.93
NMD2YHR077C TDA11P38854 504 aa2.97□□□□□ -1.93
NMD2YHR077C UTP9P38882 575 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C ACO2P39533 789 aa2.97□□□□□ -1.93
NMD2YHR077C PAN6P40459 309 aa2.97□□□□□ -1.93
NMD2YHR077C GCD10P41814 478 aa2.97□□□□□ -1.93
NMD2YHR077C GTR2P53290 341 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms