RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeast

Gene SLX9, Length 633 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX9	YGR081C	DNF1	P32660	1571 aa		3.17	□□□□□ -1.9
SLX9	YGR081C	YBR085C-A	O43137	85 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	PGS1	P25578	521 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	CBF2	P32504	956 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	UIP3	P39547	235 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	YER010C	P40011	234 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	SLZ1	P40167	298 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	YJL070C	P40361	888 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	AZF1	P41696	914 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	SMC3	P47037	1230 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	PIL1	P53252	339 aa	Known RBP	3.16	□□□□□ -1.9
SLX9	YGR081C	INN1	P53901	409 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	MUB1	Q03162	620 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	ATG16	Q03818	150 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	PSR2	Q07949	397 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	LTE1	P07866	1435 aa		3.16	□□□□□ -1.9
SLX9	YGR081C	GLN3	P18494	730 aa		3.15	□□□□□ -1.91
SLX9	YGR081C	VPS24	P36095	224 aa	Known RBP	3.15	□□□□□ -1.91
SLX9	YGR081C	ALY1	P36117	915 aa		3.15	□□□□□ -1.91
SLX9	YGR081C	ERG7	P38604	731 aa		3.15	□□□□□ -1.91
SLX9	YGR081C	DIA4	P38705	446 aa	Predicted RBP	3.15	□□□□□ -1.91
SLX9	YGR081C	RGI2	P40188	164 aa		3.15	□□□□□ -1.91
SLX9	YGR081C	GUF1	P46943	645 aa		3.15	□□□□□ -1.91
SLX9	YGR081C	YDR415C	Q04033	374 aa	Predicted RBP	3.15	□□□□□ -1.91
SLX9	YGR081C	SNO4	Q04902	237 aa		3.15	□□□□□ -1.91
SLX9	YGR081C	SKG3	Q06315	1026 aa		3.15	□□□□□ -1.91
SLX9	YGR081C	HSP33	Q08914	237 aa	Known RBP	3.15	□□□□□ -1.91
SLX9	YGR081C	HSP32	Q08992	237 aa		3.15	□□□□□ -1.91
SLX9	YGR081C	CSR2	Q12734	1121 aa		3.15	□□□□□ -1.91
SLX9	YGR081C	ECM5	Q03214	1411 aa		3.14	□□□□□ -1.91
SLX9	YGR081C	PMS1	P14242	873 aa		3.14	□□□□□ -1.91
SLX9	YGR081C	LCB1	P25045	558 aa	Known RBP	3.14	□□□□□ -1.91
SLX9	YGR081C	SLC1	P33333	303 aa		3.14	□□□□□ -1.91
SLX9	YGR081C	YKL050C	P35736	922 aa		3.14	□□□□□ -1.91
SLX9	YGR081C	SPC34	P36131	295 aa		3.14	□□□□□ -1.91
SLX9	YGR081C	RIM2	P38127	377 aa		3.14	□□□□□ -1.91
SLX9	YGR081C	FUI1	P38196	639 aa		3.14	□□□□□ -1.91
SLX9	YGR081C	UBA4	P38820	440 aa		3.14	□□□□□ -1.91
SLX9	YGR081C	STR3	P53101	465 aa	Known RBP	3.14	□□□□□ -1.91
SLX9	YGR081C	SOL4	P53315	255 aa		3.14	□□□□□ -1.91
SLX9	YGR081C	TMA64	Q04600	565 aa	Known RBP	3.14	□□□□□ -1.91
SLX9	YGR081C	RTT109	Q07794	436 aa		3.14	□□□□□ -1.91
SLX9	YGR081C	APL4	Q12028	832 aa		3.14	□□□□□ -1.91
SLX9	YGR081C	YOL087C	Q99247	1116 aa		3.14	□□□□□ -1.91
SLX9	YGR081C	PWP2	P25635	923 aa	Known RBP	3.13	□□□□□ -1.91
SLX9	YGR081C	PDB1	P32473	366 aa	Known RBP	3.13	□□□□□ -1.91
SLX9	YGR081C	ERG1	P32476	496 aa	Known RBP	3.13	□□□□□ -1.91
SLX9	YGR081C	TRS65	P32893	560 aa		3.13	□□□□□ -1.91
SLX9	YGR081C	PHD1	P36093	366 aa		3.13	□□□□□ -1.91
SLX9	YGR081C	YNG2	P38806	282 aa	Known RBP	3.13	□□□□□ -1.91
SLX9	YGR081C	ANS1	P38832	159 aa		3.13	□□□□□ -1.91
SLX9	YGR081C	YER130C	P39959	443 aa		3.13	□□□□□ -1.91
SLX9	YGR081C	AAD10	P47182	288 aa		3.13	□□□□□ -1.91
SLX9	YGR081C	RPS7B	P48164	190 aa	Known RBP	3.13	□□□□□ -1.91
SLX9	YGR081C	CRZ1	P53968	678 aa		3.13	□□□□□ -1.91
SLX9	YGR081C	RIX7	Q07844	837 aa	Known RBP	3.13	□□□□□ -1.91
SLX9	YGR081C	DAP1	Q12091	152 aa		3.13	□□□□□ -1.91
SLX9	YGR081C	TIP41	Q12199	356 aa		3.13	□□□□□ -1.91
SLX9	YGR081C	MDS3	P53094	1487 aa		3.12	□□□□□ -1.91
SLX9	YGR081C	YML002W	P0CF17	737 aa		3.12	□□□□□ -1.91
SLX9	YGR081C	PWP1	P21304	576 aa	Known RBP	3.12	□□□□□ -1.91
SLX9	YGR081C	MCM4	P30665	933 aa	Known RBP	3.12	□□□□□ -1.91
SLX9	YGR081C	MIC60	P36112	540 aa		3.12	□□□□□ -1.91
SLX9	YGR081C	KTR3	P38130	404 aa	Predicted RBP	3.12	□□□□□ -1.91
SLX9	YGR081C	KAP123	P40069	1113 aa	Known RBP	3.12	□□□□□ -1.91
SLX9	YGR081C	RPS10B	P46784	105 aa	Known RBP	3.12	□□□□□ -1.91
SLX9	YGR081C	SGM1	P47166	707 aa		3.12	□□□□□ -1.91
SLX9	YGR081C	RPS10A	Q08745	105 aa	Predicted RBP	3.12	□□□□□ -1.91
SLX9	YGR081C	RDR1	Q08904	546 aa		3.12	□□□□□ -1.91
SLX9	YGR081C	NKP1	Q12493	238 aa		3.12	□□□□□ -1.91
SLX9	YGR081C	PUT2	P07275	575 aa		3.11	□□□□□ -1.91
SLX9	YGR081C	MRS3	P10566	314 aa		3.11	□□□□□ -1.91
SLX9	YGR081C	SNF3	P10870	884 aa		3.11	□□□□□ -1.91
SLX9	YGR081C	TSC10	P38342	320 aa		3.11	□□□□□ -1.91
SLX9	YGR081C	SIP4	P46954	829 aa		3.11	□□□□□ -1.91
SLX9	YGR081C	PYK2	P52489	506 aa	Known RBP	3.11	□□□□□ -1.91
SLX9	YGR081C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	RIP-Chip
SLX9	YGR081C	YML131W	Q03102	365 aa		3.11	□□□□□ -1.91
SLX9	YGR081C	MSS11	Q03825	758 aa		3.11	□□□□□ -1.91
SLX9	YGR081C	VMS1	Q04311	632 aa	Known RBP	3.11	□□□□□ -1.91
SLX9	YGR081C	PSR1	Q07800	427 aa		3.11	□□□□□ -1.91
SLX9	YGR081C	NBP2	Q12163	236 aa		3.11	□□□□□ -1.91
SLX9	YGR081C	YBR298C-A	Q8TGK4	73 aa		3.11	□□□□□ -1.91
SLX9	YGR081C	MMS1	Q06211	1407 aa		3.1	□□□□□ -1.91
SLX9	YGR081C	PDA1	P16387	420 aa	Known RBP	3.1	□□□□□ -1.91
SLX9	YGR081C	TYR1	P20049	452 aa		3.1	□□□□□ -1.91
SLX9	YGR081C	RPS2	P25443	254 aa	Known RBP	3.1	□□□□□ -1.91
SLX9	YGR081C	ACH1	P32316	526 aa		3.1	□□□□□ -1.91
SLX9	YGR081C	RRN3	P36070	627 aa		3.1	□□□□□ -1.91
SLX9	YGR081C	DBP8	P38719	431 aa		3.1	□□□□□ -1.91
SLX9	YGR081C	RTS1	P38903	757 aa		3.1	□□□□□ -1.91
SLX9	YGR081C	ELO1	P39540	310 aa		3.1	□□□□□ -1.91
SLX9	YGR081C	BUR6	P40096	142 aa		3.1	□□□□□ -1.91
SLX9	YGR081C	DIM1	P41819	318 aa	Known RBP	3.1	□□□□□ -1.91
SLX9	YGR081C	DIA3	P52290	468 aa		3.1	□□□□□ -1.91
SLX9	YGR081C	EMI2	Q04409	500 aa	Known RBP	3.1	□□□□□ -1.91
SLX9	YGR081C	FMP45	Q07651	309 aa		3.1	□□□□□ -1.91
SLX9	YGR081C	ENT4	Q07872	247 aa		3.1	□□□□□ -1.91
SLX9	YGR081C	SPE2	P21182	396 aa		3.09	□□□□□ -1.91
SLX9	YGR081C	DHH1	P39517	506 aa	Known RBP	3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 80.7 ms