RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP6	YFR010W	CDC20	P26309	610 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	AFG1	P32317	509 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	RSM22	P36056	628 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	YKL151C	P36059	337 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	YKR075C	P36155	307 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	ATP3	P38077	311 aa	Known RBP	4.15	□□□□□ -1.75
UBP6	YFR010W	VID24	P38263	362 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	FSH1	P38777	243 aa	Known RBP	4.15	□□□□□ -1.75
UBP6	YFR010W	ELP2	P42935	788 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	BST1	P43571	1029 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	YFR018C	P43599	363 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	SMC3	P47037	1230 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	ABM1	P47146	123 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	YGL138C	P53122	345 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	GTF1	P53260	183 aa	Predicted RBP	4.15	□□□□□ -1.75
UBP6	YFR010W	ESBP6	P53918	673 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	NOP15	P53927	220 aa	Predicted RBP	4.15	□□□□□ -1.75
UBP6	YFR010W	MUK1	Q02866	612 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	MUB1	Q03162	620 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	RSM28	Q03430	361 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	RSN1	Q03516	953 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	SOV1	Q04748	898 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	CUR1	Q06469	252 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	YPR196W	Q06595	470 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	RXT3	Q07458	294 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	GPB1	Q08886	897 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	RKM1	Q08961	583 aa	Predicted RBP	4.15	□□□□□ -1.75
UBP6	YFR010W	DIN7	Q12086	430 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	COX17	Q12287	69 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	MED4	Q12343	284 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	NBL1	Q3E7Y6	73 aa		4.15	□□□□□ -1.75
UBP6	YFR010W	OSM1	P21375	501 aa	Known RBP	4.14	□□□□□ -1.75
UBP6	YFR010W	YCR016W	P25617	290 aa	Known RBP	4.14	□□□□□ -1.75
UBP6	YFR010W	RRT2	P38332	387 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	SSO2	P39926	295 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	YRB1	P41920	201 aa	Known RBP	4.14	□□□□□ -1.75
UBP6	YFR010W	EFM3	P47163	339 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	APT1	P49435	187 aa	Known RBP	4.14	□□□□□ -1.75
UBP6	YFR010W	GLO1	P50107	326 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	VPS62	P53285	467 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	RHO5	P53879	331 aa	Known RBP	4.14	□□□□□ -1.75
UBP6	YFR010W	YNL143C	P53908	130 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	RPA49	Q01080	415 aa	Predicted RBP	4.14	□□□□□ -1.75
UBP6	YFR010W	YMR102C	Q03177	834 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	RLI1	Q03195	608 aa	Known RBP	4.14	□□□□□ -1.75
UBP6	YFR010W	YMR210W	Q03649	449 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	PPM1	Q04081	328 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	GTO3	Q04806	366 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	TRI1	Q05024	226 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	ACK1	Q07622	623 aa	Predicted RBP	4.14	□□□□□ -1.75
UBP6	YFR010W	AAD4	Q07747	329 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	DCI1	Q08558	271 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	SRN2	Q99176	213 aa		4.14	□□□□□ -1.75
UBP6	YFR010W	VPS63	O13549	108 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	PET494	P07390	489 aa	Predicted RBP	4.13	□□□□□ -1.75
UBP6	YFR010W	RAP1	P11938	827 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	RSR1	P13856	272 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	GID7	P25569	745 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	ARP2	P32381	391 aa	Known RBP	4.13	□□□□□ -1.75
UBP6	YFR010W	MF(ALPHA)2	P32435	120 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	OCT1	P35999	772 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	KKQ8	P36004	724 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	REG2	P38232	338 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	YHR182W	P38870	785 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	SET5	P38890	526 aa	Known RBP	4.13	□□□□□ -1.75
UBP6	YFR010W	YER085C	P40058	173 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	SCC4	P40090	624 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	YKE2	P52553	114 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	MNT2	P53059	558 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	TIM21	P53220	239 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	YNR071C	P53757	342 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	YNL134C	P53912	376 aa	Known RBP	4.13	□□□□□ -1.75
UBP6	YFR010W	IVY1	Q04934	453 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	RTT103	Q05543	409 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	FUS2	Q05670	677 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	THI22	Q06490	572 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	TLG2	Q08144	397 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	UAF30	Q08747	228 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	FMP40	Q08968	688 aa	Predicted RBP	4.13	□□□□□ -1.75
UBP6	YFR010W	HOS1	Q12214	470 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	SGS1	P35187	1447 aa		4.13	□□□□□ -1.75
UBP6	YFR010W	TEF1	P02994	458 aa	Known RBP	4.12	□□□□□ -1.75
UBP6	YFR010W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
UBP6	YFR010W	FAR1	P21268	830 aa		4.12	□□□□□ -1.75
UBP6	YFR010W	HXT1	P32465	570 aa		4.12	□□□□□ -1.75
UBP6	YFR010W	YBL055C	P34220	418 aa	Predicted RBP	4.12	□□□□□ -1.75
UBP6	YFR010W	YKL070W	P36087	169 aa		4.12	□□□□□ -1.75
UBP6	YFR010W	THI2	P38141	450 aa		4.12	□□□□□ -1.75
UBP6	YFR010W	TAE1	P38340	232 aa		4.12	□□□□□ -1.75
UBP6	YFR010W	BEM4	P39011	633 aa		4.12	□□□□□ -1.75
UBP6	YFR010W	SLZ1	P40167	298 aa		4.12	□□□□□ -1.75
UBP6	YFR010W	YTA12	P40341	825 aa		4.12	□□□□□ -1.75
UBP6	YFR010W	SHQ1	P40486	507 aa	Predicted RBP	4.12	□□□□□ -1.75
UBP6	YFR010W	DLD2	P46681	530 aa	Known RBP	4.12	□□□□□ -1.75
UBP6	YFR010W	GCD14	P46959	383 aa	Predicted RBP	4.12	□□□□□ -1.75
UBP6	YFR010W	TAF4	P50105	388 aa		4.12	□□□□□ -1.75
UBP6	YFR010W	MRK1	P50873	501 aa		4.12	□□□□□ -1.75
UBP6	YFR010W	MIG2	P53035	382 aa		4.12	□□□□□ -1.75
UBP6	YFR010W	RMR1	P53060	241 aa		4.12	□□□□□ -1.75
UBP6	YFR010W	COG1	P53079	417 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 73.5 ms