RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W MAK10Q02197 733 aa4.97□□□□□ -1.61
DEG1YFL001W YDR239CQ03780 787 aa4.97□□□□□ -1.61
DEG1YFL001W ERB1Q04660 807 aaKnown RBP4.97□□□□□ -1.61
DEG1YFL001W LEA1Q08963 238 aaPredicted RBP4.97□□□□□ -1.61
DEG1YFL001W INP53Q12271 1107 aa4.97□□□□□ -1.61
DEG1YFL001W SMC4Q12267 1418 aa4.96□□□□□ -1.62
DEG1YFL001W CHD1P32657 1468 aa4.96□□□□□ -1.62
DEG1YFL001W YMR084WA2P2R3 262 aa4.96□□□□□ -1.62
DEG1YFL001W EST1P17214 699 aaPredicted RBP4.96□□□□□ -1.62
DEG1YFL001W PTC6P25646 442 aa4.96□□□□□ -1.62
DEG1YFL001W VPH1P32563 840 aaKnown RBP4.96□□□□□ -1.62
DEG1YFL001W TIF3P34167 436 aaKnown RBP4.96□□□□□ -1.62
DEG1YFL001W SEF1P34228 1148 aa4.96□□□□□ -1.62
DEG1YFL001W CMC1P36064 111 aa4.96□□□□□ -1.62
DEG1YFL001W ADE17P38009 592 aaKnown RBP4.96□□□□□ -1.62
DEG1YFL001W OTU2P38747 307 aaKnown RBP4.96□□□□□ -1.62
DEG1YFL001W MAF1P41910 395 aa4.96□□□□□ -1.62
DEG1YFL001W SUN4P53616 420 aa4.96□□□□□ -1.62
DEG1YFL001W FIN1Q03898 291 aa4.96□□□□□ -1.62
DEG1YFL001W RPC11Q04307 110 aaPredicted RBP4.96□□□□□ -1.62
DEG1YFL001W YRF1-4O13559 1382 aa4.95□□□□□ -1.62
DEG1YFL001W ILV2P07342 687 aaKnown RBP4.95□□□□□ -1.62
DEG1YFL001W PET111P08468 800 aa4.95□□□□□ -1.62
DEG1YFL001W STE12P13574 688 aa4.95□□□□□ -1.62
DEG1YFL001W APE1P14904 514 aa4.95□□□□□ -1.62
DEG1YFL001W CLB1P24868 471 aa4.95□□□□□ -1.62
DEG1YFL001W STE50P25344 346 aa4.95□□□□□ -1.62
DEG1YFL001W PRD1P25375 712 aa4.95□□□□□ -1.62
DEG1YFL001W YCR051WP25631 222 aa4.95□□□□□ -1.62
DEG1YFL001W SEC66P33754 206 aa4.95□□□□□ -1.62
DEG1YFL001W MUP3P38734 546 aa4.95□□□□□ -1.62
DEG1YFL001W CHS7P38843 316 aa4.95□□□□□ -1.62
DEG1YFL001W SDS3P40505 327 aa4.95□□□□□ -1.62
DEG1YFL001W FAR3P46671 204 aa4.95□□□□□ -1.62
DEG1YFL001W APT1P49435 187 aaKnown RBP4.95□□□□□ -1.62
DEG1YFL001W IMD4P50094 524 aaKnown RBP4.95□□□□□ -1.62
DEG1YFL001W STB4P50104 949 aa4.95□□□□□ -1.62
DEG1YFL001W BNI5P53890 448 aaKnown RBP4.95□□□□□ -1.62
DEG1YFL001W TIM44Q01852 431 aa4.95□□□□□ -1.62
DEG1YFL001W AIM32Q04689 311 aa4.95□□□□□ -1.62
DEG1YFL001W RAD34Q06665 692 aa4.95□□□□□ -1.62
DEG1YFL001W PNS1Q12412 539 aa4.95□□□□□ -1.62
DEG1YFL001W NAT1P12945 854 aaKnown RBP4.94□□□□□ -1.62
DEG1YFL001W PDA1P16387 420 aaKnown RBP4.94□□□□□ -1.62
DEG1YFL001W KGD1P20967 1014 aaKnown RBP4.94□□□□□ -1.62
DEG1YFL001W REC107P21651 314 aa4.94□□□□□ -1.62
DEG1YFL001W PUP3P25451 205 aaKnown RBP4.94□□□□□ -1.62
DEG1YFL001W GSH1P32477 678 aa4.94□□□□□ -1.62
DEG1YFL001W PMT1P33775 817 aa4.94□□□□□ -1.62
DEG1YFL001W YBR144CP34215 104 aa4.94□□□□□ -1.62
DEG1YFL001W ELO1P39540 310 aa4.94□□□□□ -1.62
DEG1YFL001W ALG5P40350 334 aa4.94□□□□□ -1.62
DEG1YFL001W YFR020WP43600 232 aa4.94□□□□□ -1.62
DEG1YFL001W YGR016WP53209 190 aa4.94□□□□□ -1.62
DEG1YFL001W RPA49Q01080 415 aaPredicted RBP4.94□□□□□ -1.62
DEG1YFL001W CYK3Q07533 885 aa4.94□□□□□ -1.62
DEG1YFL001W RLM1Q12224 676 aa4.94□□□□□ -1.62
DEG1YFL001W SEC39Q12745 709 aa4.94□□□□□ -1.62
DEG1YFL001W ISN1Q99312 450 aa4.94□□□□□ -1.62
DEG1YFL001W MMS22Q06164 1454 aa4.93□□□□□ -1.62
DEG1YFL001W CDC25P04821 1589 aa4.93□□□□□ -1.62
DEG1YFL001W KIN3P22209 435 aa4.93□□□□□ -1.62
DEG1YFL001W DMC1P25453 334 aa4.93□□□□□ -1.62
DEG1YFL001W URA7P28274 579 aaKnown RBP4.93□□□□□ -1.62
DEG1YFL001W PAP1P29468 568 aaKnown RBP4.93□□□□□ -1.62
DEG1YFL001W RFC1P38630 861 aaKnown RBP4.93□□□□□ -1.62
DEG1YFL001W CAJ1P39101 391 aa4.93□□□□□ -1.62
DEG1YFL001W HXT14P42833 540 aa4.93□□□□□ -1.62
DEG1YFL001W SMC3P47037 1230 aa4.93□□□□□ -1.62
DEG1YFL001W ART5P53244 586 aaKnown RBP4.93□□□□□ -1.62
DEG1YFL001W OGG1P53397 376 aaPredicted RBP4.93□□□□□ -1.62
DEG1YFL001W RTT109Q07794 436 aa4.93□□□□□ -1.62
DEG1YFL001W LEU9Q12166 604 aaKnown RBP4.93□□□□□ -1.62
DEG1YFL001W RTC1Q08281 1341 aa4.93□□□□□ -1.62
DEG1YFL001W PAN1P32521 1480 aa4.92□□□□□ -1.62
DEG1YFL001W MRP13P12686 339 aa4.92□□□□□ -1.62
DEG1YFL001W TPM1P17536 199 aaKnown RBP4.92□□□□□ -1.62
DEG1YFL001W BUD14P27637 709 aa4.92□□□□□ -1.62
DEG1YFL001W MDL1P33310 695 aa4.92□□□□□ -1.62
DEG1YFL001W RXT2P38255 430 aa4.92□□□□□ -1.62
DEG1YFL001W EXO1P39875 702 aa4.92□□□□□ -1.62
DEG1YFL001W DLD2P46681 530 aaKnown RBP4.92□□□□□ -1.62
DEG1YFL001W HOS2P53096 452 aaPredicted RBP4.92□□□□□ -1.62
DEG1YFL001W YGR127WP53275 312 aa4.92□□□□□ -1.62
DEG1YFL001W IPI3P53877 555 aa4.92□□□□□ -1.62
DEG1YFL001W ARX1Q03862 593 aaKnown RBP4.92□□□□□ -1.62
DEG1YFL001W DPB4Q04603 196 aaKnown RBP4.92□□□□□ -1.62
DEG1YFL001W ETT1Q08421 412 aaKnown RBP4.92□□□□□ -1.62
DEG1YFL001W PUS9Q12069 462 aa4.92□□□□□ -1.62
DEG1YFL001W PAR32Q12515 295 aaKnown RBP4.92□□□□□ -1.62
DEG1YFL001W SPT7P35177 1332 aa4.92□□□□□ -1.62
DEG1YFL001W TY2B-LR1P0C2J3 1770 aa4.91□□□□□ -1.62
DEG1YFL001W TY2B-FP0CX63 1770 aa4.91□□□□□ -1.62
DEG1YFL001W TY2B-GR2P0CX64 1770 aa4.91□□□□□ -1.62
DEG1YFL001W TY2B-CP25384 1770 aa4.91□□□□□ -1.62
DEG1YFL001W TY2B-DR2Q03494 1770 aa4.91□□□□□ -1.62
DEG1YFL001W TY1B-DR1Q03855 1755 aa4.91□□□□□ -1.62
DEG1YFL001W TY2B-DR3Q07791 1770 aaKnown RBP4.91□□□□□ -1.62
DEG1YFL001W TY2B-OR1Q12113 1770 aa4.91□□□□□ -1.62
DEG1YFL001W TY2B-DR1Q12472 1770 aa4.91□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms