RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C ATG27P46989 271 aa2.68□□□□□ -1.98
SMB1YER029C DPB11P47027 764 aaPredicted RBP2.68□□□□□ -1.98
SMB1YER029C YNL234WP53857 426 aa2.68□□□□□ -1.98
SMB1YER029C ATG26Q06321 1198 aa2.68□□□□□ -1.98
SMB1YER029C YLR352WQ06479 807 aa2.68□□□□□ -1.98
SMB1YER029C NUS1Q12063 375 aa2.68□□□□□ -1.98
SMB1YER029C TAH18Q12181 623 aa2.68□□□□□ -1.98
SMB1YER029C YBR085C-AO43137 85 aa2.67□□□□□ -1.98
SMB1YER029C PWP2P25635 923 aaKnown RBP2.67□□□□□ -1.98
SMB1YER029C CDC15P27636 974 aa2.67□□□□□ -1.98
SMB1YER029C PDB1P32473 366 aaKnown RBP2.67□□□□□ -1.98
SMB1YER029C RPN2P32565 945 aaKnown RBP2.67□□□□□ -1.98
SMB1YER029C CNS1P33313 385 aa2.67□□□□□ -1.98
SMB1YER029C STV1P37296 890 aa2.67□□□□□ -1.98
SMB1YER029C DIA4P38705 446 aaPredicted RBP2.67□□□□□ -1.98
SMB1YER029C UBA4P38820 440 aa2.67□□□□□ -1.98
SMB1YER029C BZZ1P38822 633 aa2.67□□□□□ -1.98
SMB1YER029C UME6P39001 836 aa2.67□□□□□ -1.98
SMB1YER029C SLZ1P40167 298 aa2.67□□□□□ -1.98
SMB1YER029C YIR014WP40570 242 aa2.67□□□□□ -1.98
SMB1YER029C SMC3P47037 1230 aa2.67□□□□□ -1.98
SMB1YER029C AAD10P47182 288 aa2.67□□□□□ -1.98
SMB1YER029C SOL4P53315 255 aa2.67□□□□□ -1.98
SMB1YER029C PFK2P16862 959 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
SMB1YER029C RPB8P20436 146 aa2.66□□□□□ -1.98
SMB1YER029C SLC1P33333 303 aa2.66□□□□□ -1.98
SMB1YER029C FMP46P36141 133 aaKnown RBP2.66□□□□□ -1.98
SMB1YER029C YNG2P38806 282 aaKnown RBP2.66□□□□□ -1.98
SMB1YER029C RPS10BP46784 105 aaKnown RBP2.66□□□□□ -1.98
SMB1YER029C SIP4P46954 829 aa2.66□□□□□ -1.98
SMB1YER029C STR3P53101 465 aaKnown RBP2.66□□□□□ -1.98
SMB1YER029C NNF2P53253 936 aa2.66□□□□□ -1.98
SMB1YER029C YML131WQ03102 365 aa2.66□□□□□ -1.98
SMB1YER029C TMA64Q04600 565 aaKnown RBP2.66□□□□□ -1.98
SMB1YER029C RTT103Q05543 409 aa2.66□□□□□ -1.98
SMB1YER029C SKG3Q06315 1026 aa2.66□□□□□ -1.98
SMB1YER029C RIX7Q07844 837 aaKnown RBP2.66□□□□□ -1.98
SMB1YER029C RPS10AQ08745 105 aaPredicted RBP2.66□□□□□ -1.98
SMB1YER029C YPL272CQ08984 517 aa2.66□□□□□ -1.98
SMB1YER029C NKP1Q12493 238 aa2.66□□□□□ -1.98
SMB1YER029C MRS3P10566 314 aa2.65□□□□□ -1.99
SMB1YER029C GLN3P18494 730 aa2.65□□□□□ -1.99
SMB1YER029C PWP1P21304 576 aaKnown RBP2.65□□□□□ -1.99
SMB1YER029C RPS2P25443 254 aaKnown RBP2.65□□□□□ -1.99
SMB1YER029C RRN3P36070 627 aa2.65□□□□□ -1.99
SMB1YER029C SLX1P38324 304 aa2.65□□□□□ -1.99
SMB1YER029C ANS1P38832 159 aa2.65□□□□□ -1.99
SMB1YER029C RGI2P40188 164 aa2.65□□□□□ -1.99
SMB1YER029C YJL070CP40361 888 aa2.65□□□□□ -1.99
SMB1YER029C AZF1P41696 914 aa2.65□□□□□ -1.99
SMB1YER029C RPS7BP48164 190 aaKnown RBP2.65□□□□□ -1.99
SMB1YER029C PYK2P52489 506 aaKnown RBP2.65□□□□□ -1.99
SMB1YER029C DAP1Q12091 152 aa2.65□□□□□ -1.99
SMB1YER029C PUT2P07275 575 aa2.64□□□□□ -1.99
SMB1YER029C PMS1P14242 873 aa2.64□□□□□ -1.99
SMB1YER029C SYN8P31377 255 aa2.64□□□□□ -1.99
SMB1YER029C ERG1P32476 496 aaKnown RBP2.64□□□□□ -1.99
SMB1YER029C LOS1P33418 1100 aaPredicted RBP2.64□□□□□ -1.99
SMB1YER029C YKL050CP35736 922 aa2.64□□□□□ -1.99
SMB1YER029C PHD1P36093 366 aa2.64□□□□□ -1.99
SMB1YER029C RIM2P38127 377 aa2.64□□□□□ -1.99
SMB1YER029C TSC10P38342 320 aa2.64□□□□□ -1.99
SMB1YER029C ERG7P38604 731 aa2.64□□□□□ -1.99
SMB1YER029C ELO1P39540 310 aa2.64□□□□□ -1.99
SMB1YER029C DPH1P40487 425 aaKnown RBP2.64□□□□□ -1.99
SMB1YER029C SGM1P47166 707 aa2.64□□□□□ -1.99
SMB1YER029C YKU80Q04437 629 aa2.64□□□□□ -1.99
SMB1YER029C ENT4Q07872 247 aa2.64□□□□□ -1.99
SMB1YER029C SSP2Q08646 371 aa2.64□□□□□ -1.99
SMB1YER029C CSR2Q12734 1121 aa2.64□□□□□ -1.99
SMB1YER029C RPL19AP0CX82 189 aaKnown RBP2.63□□□□□ -1.99
SMB1YER029C RPL19BP0CX83 189 aaPredicted RBP2.63□□□□□ -1.99
SMB1YER029C KAR3P17119 729 aa2.63□□□□□ -1.99
SMB1YER029C SGV1P23293 657 aaKnown RBP2.63□□□□□ -1.99
SMB1YER029C YBR139WP38109 508 aa2.63□□□□□ -1.99
SMB1YER029C KAP123P40069 1113 aaKnown RBP2.63□□□□□ -1.99
SMB1YER029C YJR061WP40355 935 aa2.63□□□□□ -1.99
SMB1YER029C LYS4P49367 693 aaPredicted RBP2.63□□□□□ -1.99
SMB1YER029C YVH1Q02256 364 aaKnown RBP2.63□□□□□ -1.99
SMB1YER029C MSC1Q03104 513 aa2.63□□□□□ -1.99
SMB1YER029C VMS1Q04311 632 aaKnown RBP2.63□□□□□ -1.99
SMB1YER029C HCR1Q05775 265 aaKnown RBP2.63□□□□□ -1.99
SMB1YER029C APL4Q12028 832 aa2.63□□□□□ -1.99
SMB1YER029C YML002WP0CF17 737 aa2.62□□□□□ -1.99
SMB1YER029C SNF3P10870 884 aa2.62□□□□□ -1.99
SMB1YER029C LCB1P25045 558 aaKnown RBP2.62□□□□□ -1.99
SMB1YER029C ACH1P32316 526 aa2.62□□□□□ -1.99
SMB1YER029C MTR2P34232 184 aaKnown RBP2.62□□□□□ -1.99
SMB1YER029C KTR3P38130 404 aaPredicted RBP2.62□□□□□ -1.99
SMB1YER029C RTS1P38903 757 aa2.62□□□□□ -1.99
SMB1YER029C DHH1P39517 506 aaKnown RBP2.62□□□□□ -1.99
SMB1YER029C ARC1P46672 376 aaKnown RBP2.62□□□□□ -1.99
SMB1YER029C MSS11Q03825 758 aa2.62□□□□□ -1.99
SMB1YER029C YDR415CQ04033 374 aaPredicted RBP2.62□□□□□ -1.99
SMB1YER029C YMR087WQ04299 284 aa2.62□□□□□ -1.99
SMB1YER029C RBA50Q04418 439 aa2.62□□□□□ -1.99
SMB1YER029C DIC1Q06143 298 aa2.62□□□□□ -1.99
SMB1YER029C PSR1Q07800 427 aa2.62□□□□□ -1.99
SMB1YER029C GRC3Q07845 632 aa2.62□□□□□ -1.99
SMB1YER029C YBR298C-AQ8TGK4 73 aa2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms