RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W COG2P53271 262 aa4.35□□□□□ -1.71
HSP42YDR171W GTR1Q00582 310 aa4.35□□□□□ -1.71
HSP42YDR171W FAR8Q05040 523 aa4.35□□□□□ -1.71
HSP42YDR171W THI7Q05998 598 aa4.35□□□□□ -1.71
HSP42YDR171W YLR177WQ06251 628 aa4.35□□□□□ -1.71
HSP42YDR171W OPY2Q06810 360 aa4.35□□□□□ -1.71
HSP42YDR171W YDL242WQ07746 117 aa4.35□□□□□ -1.71
HSP42YDR171W RIO1Q12196 484 aaKnown RBP4.35□□□□□ -1.71
HSP42YDR171W Q0010Q9ZZX9 128 aa4.35□□□□□ -1.71
HSP42YDR171W SSK22P25390 1331 aaPredicted RBP4.35□□□□□ -1.71
HSP42YDR171W SPO12P17123 173 aa4.34□□□□□ -1.71
HSP42YDR171W NUP1P20676 1076 aa4.34□□□□□ -1.71
HSP42YDR171W YJU2P28320 278 aaPredicted RBP4.34□□□□□ -1.71
HSP42YDR171W GCG1P32656 232 aaKnown RBP4.34□□□□□ -1.71
HSP42YDR171W ORC2P32833 620 aa4.34□□□□□ -1.71
HSP42YDR171W HEK2P38199 381 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71 RIP-Chip
HSP42YDR171W OPT1P40897 799 aa4.34□□□□□ -1.71
HSP42YDR171W GPD2P41911 440 aaKnown RBP4.34□□□□□ -1.71
HSP42YDR171W ERR3P42222 437 aa4.34□□□□□ -1.71
HSP42YDR171W TDA10P42938 290 aa4.34□□□□□ -1.71
HSP42YDR171W TMA22P47089 198 aaPredicted RBP4.34□□□□□ -1.71
HSP42YDR171W TAM41P53230 385 aa4.34□□□□□ -1.71
HSP42YDR171W BTN2P53286 410 aa4.34□□□□□ -1.71
HSP42YDR171W ATG21Q02887 496 aa4.34□□□□□ -1.71
HSP42YDR171W ARO80Q04052 950 aa4.34□□□□□ -1.71
HSP42YDR171W SPN1Q06505 410 aaPredicted RBP4.34□□□□□ -1.71
HSP42YDR171W NDL1Q06568 189 aa4.34□□□□□ -1.71
HSP42YDR171W CYK3Q07533 885 aa4.34□□□□□ -1.71
HSP42YDR171W ALE1Q08548 619 aa4.34□□□□□ -1.71
HSP42YDR171W APL5Q08951 932 aaKnown RBP4.34□□□□□ -1.71
HSP42YDR171W DAS2Q12084 232 aa4.34□□□□□ -1.71
HSP42YDR171W GET3Q12154 354 aaKnown RBP4.34□□□□□ -1.71
HSP42YDR171W CHO2P05374 869 aaKnown RBP4.33□□□□□ -1.72
HSP42YDR171W YCR051WP25631 222 aa4.33□□□□□ -1.72
HSP42YDR171W DBF20P32328 564 aa4.33□□□□□ -1.72
HSP42YDR171W ARP2P32381 391 aaKnown RBP4.33□□□□□ -1.72
HSP42YDR171W SMC2P38989 1170 aaKnown RBP4.33□□□□□ -1.72
HSP42YDR171W LAS21P40367 830 aa4.33□□□□□ -1.72
HSP42YDR171W GVP36P40531 326 aaKnown RBP4.33□□□□□ -1.72
HSP42YDR171W SGM1P47166 707 aa4.33□□□□□ -1.72
HSP42YDR171W ZPR1P53303 486 aaKnown RBP4.33□□□□□ -1.72
HSP42YDR171W SUB1P54000 292 aaKnown RBP4.33□□□□□ -1.72
HSP42YDR171W EBS1Q03466 884 aaKnown RBP4.33□□□□□ -1.72
HSP42YDR171W PLM2Q04383 521 aa4.33□□□□□ -1.72
HSP42YDR171W SOV1Q04748 898 aa4.33□□□□□ -1.72
HSP42YDR171W CIA1Q05583 330 aa4.33□□□□□ -1.72
HSP42YDR171W HRD3Q05787 833 aa4.33□□□□□ -1.72
HSP42YDR171W MMR1Q06324 491 aa4.33□□□□□ -1.72
HSP42YDR171W GPN2Q08726 347 aaPredicted RBP4.33□□□□□ -1.72
HSP42YDR171W TAH18Q12181 623 aa4.33□□□□□ -1.72
HSP42YDR171W LCB4Q12246 624 aa4.33□□□□□ -1.72
HSP42YDR171W SUL2Q12325 893 aa4.33□□□□□ -1.72
HSP42YDR171W YNL162W-AQ3E7A8 72 aa4.33□□□□□ -1.72
HSP42YDR171W PNO1Q99216 274 aaKnown RBP4.33□□□□□ -1.72
HSP42YDR171W NAT1P12945 854 aaKnown RBP4.32□□□□□ -1.72
HSP42YDR171W MSM1P22438 575 aa4.32□□□□□ -1.72
HSP42YDR171W RAD16P31244 790 aa4.32□□□□□ -1.72
HSP42YDR171W SMY1P32364 656 aaKnown RBP4.32□□□□□ -1.72
HSP42YDR171W LHS1P36016 881 aa4.32□□□□□ -1.72
HSP42YDR171W KAP123P40069 1113 aaKnown RBP4.32□□□□□ -1.72
HSP42YDR171W AXL1P40851 1208 aa4.32□□□□□ -1.72
HSP42YDR171W GCN20P43535 752 aaKnown RBP4.32□□□□□ -1.72
HSP42YDR171W AIP1P46680 615 aaKnown RBP4.32□□□□□ -1.72
HSP42YDR171W RTC4P53850 401 aa4.32□□□□□ -1.72
HSP42YDR171W YNL144CP53907 740 aa4.32□□□□□ -1.72
HSP42YDR171W ASI1P54074 624 aa4.32□□□□□ -1.72
HSP42YDR171W BET4Q00618 327 aa4.32□□□□□ -1.72
HSP42YDR171W AAT1Q01802 451 aa4.32□□□□□ -1.72
HSP42YDR171W YPL108WQ02872 168 aaPredicted RBP4.32□□□□□ -1.72
HSP42YDR171W GRX3Q03835 250 aa4.32□□□□□ -1.72
HSP42YDR171W COQ11Q05892 277 aa4.32□□□□□ -1.72
HSP42YDR171W TSR1Q07381 788 aaKnown RBP4.32□□□□□ -1.72
HSP42YDR171W SLM3Q12093 417 aa4.32□□□□□ -1.72
HSP42YDR171W OCA6Q12454 224 aa4.32□□□□□ -1.72
HSP42YDR171W NBL1Q3E7Y6 73 aa4.32□□□□□ -1.72
HSP42YDR171W YRF1-3P0CX14 1859 aa4.31□□□□□ -1.72
HSP42YDR171W YRF1-7P0CX15 1859 aa4.31□□□□□ -1.72
HSP42YDR171W YRF1-6P53819 1859 aa4.31□□□□□ -1.72
HSP42YDR171W HIS4P00815 799 aaKnown RBP4.31□□□□□ -1.72
HSP42YDR171W ARG4P04076 463 aaPredicted RBP4.31□□□□□ -1.72
HSP42YDR171W PET122P10355 254 aa4.31□□□□□ -1.72
HSP42YDR171W NCP1P16603 691 aaKnown RBP4.31□□□□□ -1.72
HSP42YDR171W TYR1P20049 452 aa4.31□□□□□ -1.72
HSP42YDR171W PDE1P22434 369 aa4.31□□□□□ -1.72
HSP42YDR171W SIP1P32578 815 aa4.31□□□□□ -1.72
HSP42YDR171W EXO84P38261 753 aa4.31□□□□□ -1.72
HSP42YDR171W SIP3P38717 1229 aa4.31□□□□□ -1.72
HSP42YDR171W TOM71P38825 639 aaKnown RBP4.31□□□□□ -1.72
HSP42YDR171W CCT2P39076 527 aaKnown RBP4.31□□□□□ -1.72
HSP42YDR171W VID27P40157 782 aa4.31□□□□□ -1.72
HSP42YDR171W SAE2P46946 345 aa4.31□□□□□ -1.72
HSP42YDR171W ATP23P53722 227 aa4.31□□□□□ -1.72
HSP42YDR171W ARC35P53731 342 aaKnown RBP4.31□□□□□ -1.72
HSP42YDR171W YML122CQ03207 126 aa4.31□□□□□ -1.72
HSP42YDR171W URH1Q04179 340 aa4.31□□□□□ -1.72
HSP42YDR171W YKU80Q04437 629 aa4.31□□□□□ -1.72
HSP42YDR171W YMR114CQ04471 368 aaKnown RBP4.31□□□□□ -1.72
HSP42YDR171W STP3Q05937 343 aa4.31□□□□□ -1.72
HSP42YDR171W PIG1Q06216 648 aa4.31□□□□□ -1.72
HSP42YDR171W CSR1Q06705 408 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms