RNA–Protein interactions for RNA: YCR093W

CDC39, Transcript of Component of the CCR4-NOT1 core complex, yeastyeast

Gene CDC39, Length 6,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC39YCR093W IMG1P25626 169 aa1.25□□□□□ -2.21
CDC39YCR093W SHP1P34223 423 aa1.25□□□□□ -2.21
CDC39YCR093W SWH1P35845 1188 aa1.25□□□□□ -2.21
CDC39YCR093W CIN4P39110 191 aa1.25□□□□□ -2.21
CDC39YCR093W YEL057CP39983 233 aa1.25□□□□□ -2.21
CDC39YCR093W RPT2P40327 437 aaKnown RBP1.25□□□□□ -2.21
CDC39YCR093W YIR016WP40572 265 aa1.25□□□□□ -2.21
CDC39YCR093W POP1P41812 875 aa1.25□□□□□ -2.21
CDC39YCR093W GLO1P50107 326 aa1.25□□□□□ -2.21
CDC39YCR093W NCS2P53923 493 aaPredicted RBP1.25□□□□□ -2.21
CDC39YCR093W YNL018CP53976 612 aa1.25□□□□□ -2.21
CDC39YCR093W KAP120Q02932 1032 aa1.25□□□□□ -2.21
CDC39YCR093W SEG1Q04279 960 aa1.25□□□□□ -2.21
CDC39YCR093W SNO4Q04902 237 aa1.25□□□□□ -2.21
CDC39YCR093W HSP33Q08914 237 aaKnown RBP1.25□□□□□ -2.21
CDC39YCR093W HSP32Q08992 237 aa1.25□□□□□ -2.21
CDC39YCR093W BUD5P25300 642 aaPredicted RBP1.25□□□□□ -2.21
CDC39YCR093W APE3P37302 537 aaKnown RBP1.25□□□□□ -2.21
CDC39YCR093W MAD3P47074 515 aa1.25□□□□□ -2.21
CDC39YCR093W NPA3P47122 385 aa1.25□□□□□ -2.21
CDC39YCR093W ALT2P52892 507 aa1.25□□□□□ -2.21
CDC39YCR093W COS12P53053 380 aa1.25□□□□□ -2.21
CDC39YCR093W IMO32P53219 342 aa1.25□□□□□ -2.21
CDC39YCR093W FHN1P53279 174 aa1.25□□□□□ -2.21
CDC39YCR093W SUN4P53616 420 aa1.25□□□□□ -2.21
CDC39YCR093W ATP23P53722 227 aa1.25□□□□□ -2.21
CDC39YCR093W MOT3P54785 490 aaKnown RBP1.25□□□□□ -2.21
CDC39YCR093W YML037CQ03703 340 aa1.25□□□□□ -2.21
CDC39YCR093W GLO2Q05584 274 aa1.25□□□□□ -2.21
CDC39YCR093W ARO10Q06408 635 aa1.25□□□□□ -2.21
CDC39YCR093W BSP1Q06604 576 aa1.25□□□□□ -2.21
CDC39YCR093W LSP1Q12230 341 aaKnown RBP1.25□□□□□ -2.21
CDC39YCR093W MTF2P10849 440 aa1.25□□□□□ -2.21
CDC39YCR093W PDA1P16387 420 aaKnown RBP1.25□□□□□ -2.21
CDC39YCR093W CLB1P24868 471 aa1.25□□□□□ -2.21
CDC39YCR093W BLI1P35727 113 aa1.25□□□□□ -2.21
CDC39YCR093W RPL32P38061 130 aaKnown RBP1.25□□□□□ -2.21
CDC39YCR093W TOM71P38825 639 aaKnown RBP1.25□□□□□ -2.21
CDC39YCR093W YER010CP40011 234 aa1.25□□□□□ -2.21
CDC39YCR093W IMA5P40884 581 aa1.25□□□□□ -2.21
CDC39YCR093W PHO23P50947 330 aa1.25□□□□□ -2.21
CDC39YCR093W INA17Q02888 182 aa1.25□□□□□ -2.21
CDC39YCR093W GIS1Q03833 894 aa1.25□□□□□ -2.21
CDC39YCR093W YDR179W-AQ03983 463 aa1.25□□□□□ -2.21
CDC39YCR093W RIX7Q07844 837 aaKnown RBP1.25□□□□□ -2.21
CDC39YCR093W CTI6Q08923 506 aa1.25□□□□□ -2.21
CDC39YCR093W RUP1Q12242 671 aa1.25□□□□□ -2.21
CDC39YCR093W PRE2P30656 287 aaKnown RBP1.24□□□□□ -2.21
CDC39YCR093W SNC1P31109 117 aa1.24□□□□□ -2.21
CDC39YCR093W MRP20P32387 263 aa1.24□□□□□ -2.21
CDC39YCR093W YMC2P38087 329 aa1.24□□□□□ -2.21
CDC39YCR093W SRP72P38688 640 aaKnown RBP1.24□□□□□ -2.21
CDC39YCR093W YEL068CP39977 110 aa1.24□□□□□ -2.21
CDC39YCR093W POL31P46957 487 aa1.24□□□□□ -2.21
CDC39YCR093W ARR3Q06598 404 aa1.24□□□□□ -2.21
CDC39YCR093W PNO1Q99216 274 aaKnown RBP1.24□□□□□ -2.21
CDC39YCR093W PDR10P51533 1564 aa1.24□□□□□ -2.21
CDC39YCR093W RED1P14291 827 aa1.24□□□□□ -2.21
CDC39YCR093W WSS1P38838 269 aa1.24□□□□□ -2.21
CDC39YCR093W SPC72P39723 622 aa1.24□□□□□ -2.21
CDC39YCR093W PAC2P39937 518 aa1.24□□□□□ -2.21
CDC39YCR093W MAD2P40958 196 aa1.24□□□□□ -2.21
CDC39YCR093W RMD9P53140 646 aaKnown RBP1.24□□□□□ -2.21
CDC39YCR093W ERG26P53199 349 aaKnown RBP1.24□□□□□ -2.21
CDC39YCR093W TGL2P54857 326 aa1.24□□□□□ -2.21
CDC39YCR093W VPS74Q06385 345 aa1.24□□□□□ -2.21
CDC39YCR093W YLR352WQ06479 807 aa1.24□□□□□ -2.21
CDC39YCR093W YEH2Q07950 538 aa1.24□□□□□ -2.21
CDC39YCR093W ATX2Q12067 313 aa1.24□□□□□ -2.21
CDC39YCR093W LCB4Q12246 624 aa1.24□□□□□ -2.21
CDC39YCR093W CDC6P09119 513 aa1.24□□□□□ -2.21
CDC39YCR093W PEP5P12868 1029 aa1.24□□□□□ -2.21
CDC39YCR093W CLN1P20437 546 aa1.24□□□□□ -2.21
CDC39YCR093W SGF29P25554 259 aa1.24□□□□□ -2.21
CDC39YCR093W EBP2P36049 427 aaKnown RBP1.24□□□□□ -2.21
CDC39YCR093W MRPL7P36519 292 aa1.24□□□□□ -2.21
CDC39YCR093W ARA1P38115 344 aa1.24□□□□□ -2.21
CDC39YCR093W RGI2P40188 164 aa1.24□□□□□ -2.21
CDC39YCR093W ALG5P40350 334 aa1.24□□□□□ -2.21
CDC39YCR093W CTK2P46962 323 aa1.24□□□□□ -2.21
CDC39YCR093W BRO1P48582 844 aa1.24□□□□□ -2.21
CDC39YCR093W RMT2Q03305 412 aa1.24□□□□□ -2.21
CDC39YCR093W FMP42Q04991 504 aa1.24□□□□□ -2.21
CDC39YCR093W SPT7P35177 1332 aa1.24□□□□□ -2.21
CDC39YCR093W VMR1P38735 1592 aa1.24□□□□□ -2.21
CDC39YCR093W BUD3P25558 1636 aa1.24□□□□□ -2.21
CDC39YCR093W TY2A-LR1P0C2J4 438 aa1.24□□□□□ -2.21
CDC39YCR093W TY2A-FP0CX61 438 aa1.24□□□□□ -2.21
CDC39YCR093W TY2A-GR2P0CX62 438 aa1.24□□□□□ -2.21
CDC39YCR093W MIH1P23748 554 aa1.24□□□□□ -2.21
CDC39YCR093W TY2A-CP25383 438 aa1.24□□□□□ -2.21
CDC39YCR093W CMC1P36064 111 aa1.24□□□□□ -2.21
CDC39YCR093W RTT107P38850 1070 aa1.24□□□□□ -2.21
CDC39YCR093W YTA12P40341 825 aa1.24□□□□□ -2.21
CDC39YCR093W ASN1P49089 572 aaKnown RBP1.24□□□□□ -2.21
CDC39YCR093W YGL242CP53066 181 aa1.24□□□□□ -2.21
CDC39YCR093W VPS73P53142 486 aaKnown RBP1.24□□□□□ -2.21
CDC39YCR093W ERO1Q03103 563 aa1.24□□□□□ -2.21
CDC39YCR093W TY2A-DR2Q03483 438 aa1.24□□□□□ -2.21
CDC39YCR093W DPB4Q04603 196 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms