RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 DYNLL2Q96FJ2 89 aa11.82□□□□□ -0.52
PHGDH-212ENST00000641247 GLT1D1Q96MS3 346 aa11.82□□□□□ -0.52
PHGDH-212ENST00000641247 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-212ENST00000641247 ZNF214Q9UL59 606 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-212ENST00000641247 FAM184BQ9ULE4 1060 aa11.82□□□□□ -0.52
PHGDH-212ENST00000641247 TMX2Q9Y320 296 aa11.82□□□□□ -0.52
PHGDH-212ENST00000641247 RIPK3Q9Y572 518 aa11.82□□□□□ -0.52
PHGDH-212ENST00000641247 GRIN2DO15399 1336 aa11.82□□□□□ -0.52
PHGDH-212ENST00000641247 A0A0G2JMZ2 1700 aa11.81□□□□□ -0.52
PHGDH-212ENST00000641247 PI4K2BG5E9Z4 385 aa11.81□□□□□ -0.52
PHGDH-212ENST00000641247 IDH1O75874 414 aaKnown RBP11.81□□□□□ -0.52
PHGDH-212ENST00000641247 SLC25A27O95847 323 aa11.81□□□□□ -0.52
PHGDH-212ENST00000641247 C6orf222P0C671 652 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-212ENST00000641247 AKR1B1P15121 316 aa11.81□□□□□ -0.52
PHGDH-212ENST00000641247 CST5P28325 142 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-212ENST00000641247 STAT3P40763 770 aa11.81□□□□□ -0.52
PHGDH-212ENST00000641247 KCTD2Q14681 263 aa11.81□□□□□ -0.52
PHGDH-212ENST00000641247 CCDC158Q5M9N0 1113 aa11.81□□□□□ -0.52
PHGDH-212ENST00000641247 CCDC174Q6PII3 467 aa11.81□□□□□ -0.52
PHGDH-212ENST00000641247 VTI1AQ96AJ9 217 aa11.81□□□□□ -0.52
PHGDH-212ENST00000641247 ZNF512BQ96KM6 892 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-212ENST00000641247 FGD4Q96M96 766 aa11.81□□□□□ -0.52
PHGDH-212ENST00000641247 WNT8AQ9H1J5 351 aa11.81□□□□□ -0.52
PHGDH-212ENST00000641247 VCPKMTQ9H867 229 aa11.81□□□□□ -0.52
PHGDH-212ENST00000641247 DBNLQ9UJU6 430 aaKnown RBP11.81□□□□□ -0.52
PHGDH-212ENST00000641247 ZHX1Q9UKY1 873 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-212ENST00000641247 CDK5RAP2Q96SN8 1893 aa11.8□□□□□ -0.52
PHGDH-212ENST00000641247 A0A0U1RQG5 324 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-212ENST00000641247 E9PSI1 815 aa11.8□□□□□ -0.52
PHGDH-212ENST00000641247 VWA5AO00534 786 aa11.8□□□□□ -0.52
PHGDH-212ENST00000641247 DUSP11O75319 330 aaKnown RBP11.8□□□□□ -0.52
PHGDH-212ENST00000641247 POLR3DP05423 398 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-212ENST00000641247 GJA9P57773 515 aa11.8□□□□□ -0.52
PHGDH-212ENST00000641247 BEX3Q00994 111 aa11.8□□□□□ -0.52
PHGDH-212ENST00000641247 AAK1Q2M2I8 961 aa11.8□□□□□ -0.52
PHGDH-212ENST00000641247 MAMDC4Q6UXC1 1216 aa11.8□□□□□ -0.52
PHGDH-212ENST00000641247 SLC43A3Q8NBI5 491 aa11.8□□□□□ -0.52
PHGDH-212ENST00000641247 SNX27Q96L92 541 aa11.8□□□□□ -0.52
PHGDH-212ENST00000641247 API5Q9BZZ5 524 aaKnown RBP11.8□□□□□ -0.52
PHGDH-212ENST00000641247 CCDC8Q9H0W5 538 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-212ENST00000641247 UPF3AQ9H1J1 476 aaKnown RBP11.8□□□□□ -0.52
PHGDH-212ENST00000641247 HDAC5Q9UQL6 1122 aa11.8□□□□□ -0.52
PHGDH-212ENST00000641247 CNPY2Q9Y2B0 182 aa11.8□□□□□ -0.52
PHGDH-212ENST00000641247 NCOR1O75376 2440 aa11.8□□□□□ -0.52
PHGDH-212ENST00000641247 MROH7Q68CQ1 1323 aa11.8□□□□□ -0.52
PHGDH-212ENST00000641247 DNAJC25-GNG10A0A024R161 153 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-212ENST00000641247 CA3P07451 260 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 MRE11P49959 708 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 ACVR2BQ13705 512 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 TTLL4Q14679 1199 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 CCDC144BQ3MJ40 725 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 GNASQ5JWF2 1037 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 TRMT2AQ8IZ69 625 aaKnown RBP11.79□□□□□ -0.52
PHGDH-212ENST00000641247 SDR42E1Q8WUS8 393 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 EAF2Q96CJ1 260 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-212ENST00000641247 SCLYQ96I15 445 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 KATNBL1Q9H079 304 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 TRPV6Q9H1D0 765 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 GPR108Q9NPR9 543 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 PCDHA11Q9Y5I1 949 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 ASTN1O14525 1302 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 FOCADQ5VW36 1801 aa11.79□□□□□ -0.52
PHGDH-212ENST00000641247 WDR46O15213 610 aaKnown RBP11.78□□□□□ -0.52
PHGDH-212ENST00000641247 LPXNO60711 386 aa11.78□□□□□ -0.52
PHGDH-212ENST00000641247 NEFLP07196 543 aa11.78□□□□□ -0.52
PHGDH-212ENST00000641247 GNAI3P08754 354 aa11.78□□□□□ -0.52
PHGDH-212ENST00000641247 TMEM63BQ5T3F8 832 aa11.78□□□□□ -0.52
PHGDH-212ENST00000641247 CXCL17Q6UXB2 119 aa11.78□□□□□ -0.52
PHGDH-212ENST00000641247 TMEM179Q6ZVK1 233 aa11.78□□□□□ -0.52
PHGDH-212ENST00000641247 PCSK9Q8NBP7 692 aaKnown RBP11.78□□□□□ -0.52
PHGDH-212ENST00000641247 ANKS1AQ92625 1134 aa11.78□□□□□ -0.52
PHGDH-212ENST00000641247 AGBL1Q96MI9 1066 aa11.78□□□□□ -0.52
PHGDH-212ENST00000641247 NOC4LQ9BVI4 516 aaKnown RBP11.78□□□□□ -0.52
PHGDH-212ENST00000641247 HIPK3Q9H422 1215 aa11.78□□□□□ -0.52
PHGDH-212ENST00000641247 MCM9Q9NXL9 1143 aa11.78□□□□□ -0.52
PHGDH-212ENST00000641247 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-212ENST00000641247 PPP1R9AQ9ULJ8 1098 aa11.78□□□□□ -0.52
PHGDH-212ENST00000641247 SLC4A7Q9Y6M7 1214 aa11.78□□□□□ -0.52
PHGDH-212ENST00000641247 CHD7Q9P2D1 2997 aa11.78□□□□□ -0.52
PHGDH-212ENST00000641247 REV3LO60673 3130 aa11.77□□□□□ -0.52
PHGDH-212ENST00000641247 CYP2D7A0A087X1C5 515 aa11.77□□□□□ -0.53
PHGDH-212ENST00000641247 B4GALT4O60513 344 aa11.77□□□□□ -0.53
PHGDH-212ENST00000641247 IGSF3O75054 1194 aa11.77□□□□□ -0.53
PHGDH-212ENST00000641247 EEF2P13639 858 aaKnown RBP11.77□□□□□ -0.53
PHGDH-212ENST00000641247 NKX3-2P78367 333 aa11.77□□□□□ -0.53
PHGDH-212ENST00000641247 ICA1Q05084 483 aa11.77□□□□□ -0.53
PHGDH-212ENST00000641247 POLA2Q14181 598 aa11.77□□□□□ -0.53
PHGDH-212ENST00000641247 SLFNL1Q499Z3 407 aa11.77□□□□□ -0.53
PHGDH-212ENST00000641247 MSL3Q8N5Y2 521 aaKnown RBP11.77□□□□□ -0.53
PHGDH-212ENST00000641247 HLA-CQ95604 372 aa11.77□□□□□ -0.53
PHGDH-212ENST00000641247 DCP1AQ9NPI6 582 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-212ENST00000641247 COG5Q9UP83 839 aa11.77□□□□□ -0.53
PHGDH-212ENST00000641247 DDX49Q9Y6V7 483 aaKnown RBP11.77□□□□□ -0.53
PHGDH-212ENST00000641247 ZBBXA8MT70 800 aa11.76□□□□□ -0.53
PHGDH-212ENST00000641247 TLR3O15455 904 aaKnown RBP11.76□□□□□ -0.53
PHGDH-212ENST00000641247 PRKAB2O43741 272 aa11.76□□□□□ -0.53
PHGDH-212ENST00000641247 GNAI2P04899 355 aa11.76□□□□□ -0.53
PHGDH-212ENST00000641247 ATP2A2P16615 1042 aaKnown RBP11.76□□□□□ -0.53
PHGDH-212ENST00000641247 PSMC6P62333 389 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms