RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 MAGEA10P43363 369 aaPredicted RBP8.92□□□□□ -0.98
RTTN-223ENST00000640931 GYG1P46976 350 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 RASGRF1Q13972 1273 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 SLMAPQ14BN4 828 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 BRD3Q15059 726 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 SLC4A8Q2Y0W8 1093 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 GJC2Q5T442 439 aaPredicted RBP8.92□□□□□ -0.98
RTTN-223ENST00000640931 THEMIS2Q5TEJ8 643 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 FERMT3Q86UX7 667 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 DRC7Q8IY82 874 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 CCAR2Q8N163 923 aaKnown RBP8.92□□□□□ -0.98
RTTN-223ENST00000640931 CNNM3Q8NE01 707 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 JAKMIP2Q96AA8 810 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 INTS4Q96HW7 963 aaKnown RBP8.92□□□□□ -0.98
RTTN-223ENST00000640931 CORO1CQ9ULV4 474 aaPredicted RBP8.92□□□□□ -0.98
RTTN-223ENST00000640931 TACC3Q9Y6A5 838 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 ZNF532Q9HCE3 1301 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 LRRC10BA6NIK2 292 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 E7EWF7 191 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 PRKAB2O43741 272 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 KIAA0753Q2KHM9 967 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 ZNF394Q53GI3 561 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 CCDC92Q53HC0 331 aaPredicted RBP8.92□□□□□ -0.98
RTTN-223ENST00000640931 SLC9C2Q5TAH2 1124 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 MIS18BP1Q6P0N0 1132 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 PLA2G4DQ86XP0 818 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 CACTINQ8WUQ7 758 aaKnown RBP8.92□□□□□ -0.98
RTTN-223ENST00000640931 KCNN1Q92952 543 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 BRF1Q92994 677 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 MPHOSPH8Q99549 860 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 GORASP1Q9BQQ3 440 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 PARD6BQ9BYG5 372 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 NCOA5Q9HCD5 579 aaKnown RBP8.92□□□□□ -0.98
RTTN-223ENST00000640931 ARHGEF10LQ9HCE6 1279 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 KLC4Q9NSK0 619 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 TBC1D7Q9P0N9 293 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 DDX20Q9UHI6 824 aaKnown RBP8.92□□□□□ -0.98
RTTN-223ENST00000640931 DNAI1Q9UI46 699 aa8.92□□□□□ -0.98
RTTN-223ENST00000640931 COL5A3P25940 1745 aaPredicted RBP8.92□□□□□ -0.98
RTTN-223ENST00000640931 RREB1Q92766 1687 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 VPS37CA5D8V6 355 aaPredicted RBP8.91□□□□□ -0.98
RTTN-223ENST00000640931 CCDC151A5D8V7 595 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 GOLGA6L9A6NEM1 432 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 GPAA1O43292 621 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 ZEB2O60315 1214 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 ZNF189O75820 626 aaPredicted RBP8.91□□□□□ -0.98
RTTN-223ENST00000640931 RNF8O76064 485 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 FGAP02671 866 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 SMTNP53814 917 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 PABPC4Q13310 644 aaKnown RBP eCLIP8.91□□□□□ -0.98
RTTN-223ENST00000640931 SNW1Q13573 536 aaKnown RBP8.91□□□□□ -0.98
RTTN-223ENST00000640931 Q4G0T1 1027 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 SOGA3Q5TF21 947 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 FAM196AQ6ZSG2 479 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 HDXQ7Z353 690 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 USP48Q86UV5 1035 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 APLFQ8IW19 511 aaPredicted RBP8.91□□□□□ -0.98
RTTN-223ENST00000640931 SMYD1Q8NB12 490 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 CCDC150Q8NCX0 1101 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 HNRNPLLQ8WVV9 542 aaKnown RBP8.91□□□□□ -0.98
RTTN-223ENST00000640931 CUL5Q93034 780 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 GPR101Q96P66 508 aaPredicted RBP8.91□□□□□ -0.98
RTTN-223ENST00000640931 RABL2BQ9UNT1 228 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 MTMR6Q9Y217 621 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 MYH3P11055 1940 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 AKAP11Q9UKA4 1901 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 BTAF1O14981 1849 aa8.91□□□□□ -0.98
RTTN-223ENST00000640931 FRMD3A2A2Y4 597 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 STX6O43752 255 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 PSMA5P28066 241 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 ADD2P35612 726 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 ARHGAP25P42331 645 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 ZNF75DP51815 510 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 CUL3Q13618 768 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 PUM3Q15397 648 aaKnown RBP8.9□□□□□ -0.98
RTTN-223ENST00000640931 CCDC152Q4G0S7 254 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 CCDC38Q502W7 563 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 PARP10Q53GL7 1025 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 TMEM110Q86TL2 294 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 LRRC8AQ8IWT6 810 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 RNF168Q8IYW5 571 aaPredicted RBP8.9□□□□□ -0.98
RTTN-223ENST00000640931 MIGA1Q8NAN2 632 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 TRIM58Q8NG06 486 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.9□□□□□ -0.98
RTTN-223ENST00000640931 ARMT1Q9H993 441 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 SENP2Q9HC62 589 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 GPCPD1Q9NPB8 672 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 RTEL1Q9NZ71 1219 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 PHLPP2Q6ZVD8 1323 aa8.9□□□□□ -0.98
RTTN-223ENST00000640931 TCRBV5S4A2TA0A5A2 114 aa8.9□□□□□ -0.99
RTTN-223ENST00000640931 RPS6KA4O75676 772 aa8.9□□□□□ -0.99
RTTN-223ENST00000640931 ZSCAN22P10073 491 aaPredicted RBP8.9□□□□□ -0.99
RTTN-223ENST00000640931 PDE6AP16499 860 aa8.9□□□□□ -0.99
RTTN-223ENST00000640931 HOXA10P31260 410 aaPredicted RBP8.9□□□□□ -0.99
RTTN-223ENST00000640931 DNM1Q05193 864 aaKnown RBP8.9□□□□□ -0.99
RTTN-223ENST00000640931 SNCBQ16143 134 aa8.9□□□□□ -0.99
RTTN-223ENST00000640931 LONRF2Q1L5Z9 754 aa8.9□□□□□ -0.99
RTTN-223ENST00000640931 DPY19L2Q6NUT2 758 aa8.9□□□□□ -0.99
RTTN-223ENST00000640931 OTUD6AQ7L8S5 288 aa8.9□□□□□ -0.99
RTTN-223ENST00000640931 ADGRA1Q86SQ6 560 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms