RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	SWAP70	Q9UH65	585 aa		12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	HACL1	Q9UJ83	578 aa		12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	PCDHA4	Q9UN74	947 aa		12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	STX8	Q9UNK0	236 aa		12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	GREB1L	Q9C091	1923 aa	Predicted RBP	12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	ZNF541	Q9H0D2	1346 aa		12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	KLRF2	D3W0D1	207 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	GOLGA6L19	H0YKK7	550 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	STXBP3	O00186	592 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	PSMD14	O00487	310 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	TPM3	P06753	285 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	PARP1	P09874	1014 aa	Known RBP	12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	AKR1B1	P15121	316 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	CDC25B	P30305	580 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	SHMT1	P34896	483 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	PRELP	P51888	382 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	ZNF174	Q15697	407 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	SPECC1	Q5M775	1068 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	WWC2	Q6AWC2	1192 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	GALNT17	Q6IS24	598 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	CHADL	Q6NUI6	762 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	TYW1B	Q6NUM6	668 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	METTL16	Q86W50	562 aa	Known RBP	12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	DPF2	Q92785	391 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	FERMT2	Q96AC1	680 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	CSRNP2	Q9H175	543 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	MTMR4	Q9NYA4	1195 aa		12.86	□□□□□ -0.35
GFAP-238	ENST00000640859	SIPA1L1	O43166	1804 aa		12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	VIL1	P09327	827 aa	Known RBP	12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	ATP2C1	P98194	919 aa	Predicted RBP	12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	PNOC	Q13519	176 aa		12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	DPCR1	Q3MIW9	517 aa		12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	PIK3AP1	Q6ZUJ8	805 aa		12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	AOPEP	Q8N6M6	819 aa		12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	CNNM3	Q8NE01	707 aa		12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	TRIM5	Q9C035	493 aa		12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	EHD4	Q9H223	541 aa		12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	BARHL2	Q9NY43	387 aa		12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	SERTAD1	Q9UHV2	236 aa		12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	SERPINB13	Q9UIV8	391 aa		12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	PSME4	Q14997	1843 aa		12.85	□□□□□ -0.35
GFAP-238	ENST00000640859	YDJC	A8MPS7	323 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	USP17L5	A8MUK1	530 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	BECN2	A8MW95	431 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	BIN1	O00499	593 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	POLR2D	O15514	142 aa	Known RBP	12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	ACTN4	O43707	911 aa	Known RBP	12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	GOLGA8H	P0CJ92	632 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	SNHG28	P0DPA3	235 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	GMPS	P49915	693 aa	Predicted RBP	12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	NFIA	Q12857	509 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	ZRSR1	Q15695	479 aa	Known RBP	12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	USP17L2	Q6R6M4	530 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	USP49	Q70CQ1	688 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	RASGRP2	Q7LDG7	609 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	KIAA0825	Q8IV33	1275 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	ZFPM1	Q8IX07	1006 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	C4orf32	Q8N8J7	132 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	CCDC148	Q8NFR7	591 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	IDI2	Q9BXS1	227 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	RIOX1	Q9H6W3	641 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	RRAGC	Q9HB90	399 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	ADARB2	Q9NS39	739 aa	Known RBP	12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	PCDHA6	Q9UN73	950 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	MTMR7	Q9Y216	660 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	PCDHA8	Q9Y5H6	950 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	PCDHAC2	Q9Y5I4	1007 aa		12.84	□□□□□ -0.35
GFAP-238	ENST00000640859	GOLGA6L6	A8MZA4	724 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	FOXN1	O15353	648 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	MYO1B	O43795	1136 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	HLA-DOA	P06340	250 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	PDHB	P11177	359 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	SARS	P49591	514 aa	Known RBP	12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	NUBP1	P53384	320 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	PTGDR	Q13258	359 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	NCAPH	Q15003	741 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	KANK3	Q6NY19	840 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	SPC24	Q8NBT2	197 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	MRFAP1L1	Q96HT8	127 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	CCDC17	Q96LX7	622 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	ZNF830	Q96NB3	372 aa	Predicted RBP	12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	GPRC5D	Q9NZD1	345 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	FAM198A	Q9UFP1	575 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	CNOT7	Q9UIV1	285 aa	Known RBP	12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	HOOK1	Q9UJC3	728 aa	Known RBP	12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	SERPINA10	Q9UK55	444 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	PCDHA5	Q9Y5H7	936 aa		12.83	□□□□□ -0.36
GFAP-238	ENST00000640859	MYH4	Q9Y623	1939 aa		12.82	□□□□□ -0.36
GFAP-238	ENST00000640859	SMTNL1	A8MU46	457 aa		12.82	□□□□□ -0.36
GFAP-238	ENST00000640859	IKBKB	O14920	756 aa		12.82	□□□□□ -0.36
GFAP-238	ENST00000640859	TTLL1	O95922	423 aa		12.82	□□□□□ -0.36
GFAP-238	ENST00000640859	PRKAR2A	P13861	404 aa	Known RBP	12.82	□□□□□ -0.36
GFAP-238	ENST00000640859	EPHX2	P34913	555 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms