RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 COBLO75128 1261 aa13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 CYP21A2P08686 494 aa13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 CPA1P15085 419 aa13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 RPS6KB1P23443 525 aa13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 NBR1Q14596 966 aa13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 COG2Q14746 738 aa13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 ANKRD1Q15327 319 aa13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 NOL8Q76FK4 1167 aaKnown RBP13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 DYNLL2Q96FJ2 89 aa13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 INTS4Q96HW7 963 aaKnown RBP13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 NEK1Q96PY6 1258 aa13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 SENP6Q9GZR1 1112 aaPredicted RBP13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 ALDH8A1Q9H2A2 487 aaPredicted RBP13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 IVNS1ABPQ9Y6Y0 642 aa13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 ZNF236Q9UL36 1845 aa13.96□□□□□ -0.17
ERGIC3-220ENST00000640748 DNM1LO00429 736 aa13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 MPHOSPH10O00566 681 aaKnown RBP13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 PRKAB2O43741 272 aa13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 MSCO60682 206 aa13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 HMGB1P09429 215 aaKnown RBP13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 ERCC3P19447 782 aa13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 ADORA2AP29274 412 aa13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 CNGA1P29973 690 aa13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 NFKBIBQ15653 356 aa13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 IMMTQ16891 758 aaKnown RBP13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 SHCBP1Q8NEM2 672 aa13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 SPATC1LQ9H0A9 340 aa13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 ARMT1Q9H993 441 aa13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 STXBP5LQ9Y2K9 1186 aa13.95□□□□□ -0.18
ERGIC3-220ENST00000640748 AKR1B1P15121 316 aa13.94□□□□□ -0.18
ERGIC3-220ENST00000640748 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
ERGIC3-220ENST00000640748 OLFML2BQ68BL8 750 aa13.94□□□□□ -0.18
ERGIC3-220ENST00000640748 TMEM179Q6ZVK1 233 aa13.94□□□□□ -0.18
ERGIC3-220ENST00000640748 STRBPQ96SI9 672 aaKnown RBP13.94□□□□□ -0.18
ERGIC3-220ENST00000640748 TANGO6Q9C0B7 1094 aa13.94□□□□□ -0.18
ERGIC3-220ENST00000640748 SH2B1Q9NRF2 756 aaPredicted RBP13.94□□□□□ -0.18
ERGIC3-220ENST00000640748 HOXC10Q9NYD6 342 aa13.94□□□□□ -0.18
ERGIC3-220ENST00000640748 TAF6LQ9Y6J9 622 aa13.94□□□□□ -0.18
ERGIC3-220ENST00000640748 UNC80Q8N2C7 3258 aa13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 CYP2D7A0A087X1C5 515 aa13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 PATL2C9JE40 543 aaKnown RBP13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 STRNO43815 780 aa13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 MBD4O95243 580 aa13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 FGAP02671 866 aa13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 GNAT2P19087 354 aa13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 DSG3P32926 999 aa13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 NUCB2P80303 420 aa13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 ALX1Q15699 326 aa13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 GJC2Q5T442 439 aaPredicted RBP13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 DPP9Q86TI2 863 aa13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 SPICE1Q8N0Z3 855 aa13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 ATG4CQ96DT6 458 aa13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 TMX2Q9Y320 296 aa13.93□□□□□ -0.18
ERGIC3-220ENST00000640748 E7EWF7 191 aa13.92□□□□□ -0.18
ERGIC3-220ENST00000640748 POTEB2H3BUK9 544 aa13.92□□□□□ -0.18
ERGIC3-220ENST00000640748 ZNF213O14771 459 aa13.92□□□□□ -0.18
ERGIC3-220ENST00000640748 FOXP2O15409 715 aa13.92□□□□□ -0.18
ERGIC3-220ENST00000640748 APPP05067 770 aa13.92□□□□□ -0.18
ERGIC3-220ENST00000640748 RTP1P59025 263 aa13.92□□□□□ -0.18
ERGIC3-220ENST00000640748 PRAMEF19Q5SWL8 479 aa13.92□□□□□ -0.18
ERGIC3-220ENST00000640748 ANO1Q5XXA6 986 aa13.92□□□□□ -0.18
ERGIC3-220ENST00000640748 STOX1Q6ZVD7 989 aa13.92□□□□□ -0.18
ERGIC3-220ENST00000640748 MB21D1Q8N884 522 aa13.92□□□□□ -0.18
ERGIC3-220ENST00000640748 VCPKMTQ9H867 229 aa13.92□□□□□ -0.18
ERGIC3-220ENST00000640748 SWAP70Q9UH65 585 aa13.92□□□□□ -0.18
ERGIC3-220ENST00000640748 ADAMTS5Q9UNA0 930 aa13.92□□□□□ -0.18
ERGIC3-220ENST00000640748 ZMYM6O95789 1325 aa13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 SEPT4O43236 478 aa13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 FLOT1O75955 427 aa13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 ICA1Q05084 483 aa13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 TMEM132BQ14DG7 1078 aa13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 SNX17Q15036 470 aa13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 C12orf60Q5U649 245 aa13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 DHX32Q7L7V1 743 aaKnown RBP13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 ABRAQ8N0Z2 381 aa13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 GUCD1Q96NT3 240 aa13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 MROH8Q9H579 483 aa13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 ATP8A2Q9NTI2 1148 aa13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 LTBP2Q14767 1821 aa13.91□□□□□ -0.18
ERGIC3-220ENST00000640748 USP17L12C9JPN9 530 aa13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 USP17L21D6R901 530 aa13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 CDK8P49336 464 aa13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 PLS1Q14651 629 aa13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 FAM109BQ6ICB4 259 aaPredicted RBP13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 SLC39A5Q6ZMH5 540 aa13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 C16orf86Q6ZW13 317 aa13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 ARRDC4Q8NCT1 418 aa13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 MAML3Q96JK9 1138 aa13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 LBHD1Q9BQE6 289 aaPredicted RBP13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 NACAP1Q9BZK3 213 aa13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 FBXO28Q9NVF7 368 aa13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 SLC4A4Q9Y6R1 1079 aa13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 PARP14Q460N5 1801 aa13.9□□□□□ -0.18
ERGIC3-220ENST00000640748 WDR46O15213 610 aaKnown RBP13.89□□□□□ -0.19
ERGIC3-220ENST00000640748 EEF2P13639 858 aaKnown RBP13.89□□□□□ -0.19
ERGIC3-220ENST00000640748 HAND2P61296 217 aa13.89□□□□□ -0.19
ERGIC3-220ENST00000640748 FGD1P98174 961 aa13.89□□□□□ -0.19
ERGIC3-220ENST00000640748 TOB2Q14106 344 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms