RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	KCNB2	Q92953	911 aa		31.34	■■■□□ 2.61
VEGFA-231	ENST00000640499	ZNF333	Q96JL9	665 aa		31.34	■■■□□ 2.61
VEGFA-231	ENST00000640499	PRR12	Q9ULL5	1215 aa		31.34	■■■□□ 2.61
VEGFA-231	ENST00000640499	RIPK3	Q9Y572	518 aa		31.34	■■■□□ 2.61
VEGFA-231	ENST00000640499	ADCY3	O60266	1144 aa		31.33	■■■□□ 2.61
VEGFA-231	ENST00000640499	ELN	P15502	786 aa		31.33	■■■□□ 2.61
VEGFA-231	ENST00000640499	SLC16A2	P36021	539 aa		31.33	■■■□□ 2.61
VEGFA-231	ENST00000640499	ZNF543	Q08ER8	600 aa		31.33	■■■□□ 2.61
VEGFA-231	ENST00000640499	CCDC96	Q2M329	555 aa		31.33	■■■□□ 2.61
VEGFA-231	ENST00000640499	TSGA10IP	Q3SY00	556 aa		31.33	■■■□□ 2.61
VEGFA-231	ENST00000640499	RALYL	Q86SE5	291 aa	Known RBP	31.33	■■■□□ 2.61
VEGFA-231	ENST00000640499	RIOX2	Q8IUF8	465 aa		31.33	■■■□□ 2.61
VEGFA-231	ENST00000640499	IGDCC4	Q8TDY8	1250 aa		31.33	■■■□□ 2.61
VEGFA-231	ENST00000640499	GPCPD1	Q9NPB8	672 aa		31.33	■■■□□ 2.61
VEGFA-231	ENST00000640499	GPHN	Q9NQX3	736 aa	Predicted RBP	31.33	■■■□□ 2.61
VEGFA-231	ENST00000640499	ZNF536	O15090	1300 aa		31.32	■■■□□ 2.6
VEGFA-231	ENST00000640499	ATP2A1	O14983	1001 aa		31.32	■■■□□ 2.6
VEGFA-231	ENST00000640499	GRK4	P32298	578 aa		31.32	■■■□□ 2.6
VEGFA-231	ENST00000640499	SNAP25	P60880	206 aa		31.32	■■■□□ 2.6
VEGFA-231	ENST00000640499	GRB14	Q14449	540 aa		31.32	■■■□□ 2.6
VEGFA-231	ENST00000640499	CCAR1	Q8IX12	1150 aa	Known RBP	31.32	■■■□□ 2.6
VEGFA-231	ENST00000640499	PXYLP1	Q8TE99	480 aa		31.32	■■■□□ 2.6
VEGFA-231	ENST00000640499	NUDT12	Q9BQG2	462 aa		31.32	■■■□□ 2.6
VEGFA-231	ENST00000640499	KAT14	Q9H8E8	782 aa		31.32	■■■□□ 2.6
VEGFA-231	ENST00000640499	RAVER2	Q9HCJ3	691 aa	Known RBP	31.32	■■■□□ 2.6
VEGFA-231	ENST00000640499	ISY1	Q9ULR0	285 aa	Known RBP	31.32	■■■□□ 2.6
VEGFA-231	ENST00000640499	GOLGA8H	P0CJ92	632 aa		31.31	■■■□□ 2.6
VEGFA-231	ENST00000640499	CYP2B6	P20813	491 aa		31.31	■■■□□ 2.6
VEGFA-231	ENST00000640499	IFIT1B	Q5T764	474 aa	Known RBP	31.31	■■■□□ 2.6
VEGFA-231	ENST00000640499	WDR78	Q5VTH9	848 aa		31.31	■■■□□ 2.6
VEGFA-231	ENST00000640499	NCAPG2	Q86XI2	1143 aa		31.31	■■■□□ 2.6
VEGFA-231	ENST00000640499	MROH8	Q9H579	483 aa		31.31	■■■□□ 2.6
VEGFA-231	ENST00000640499	SLC15A5	A6NIM6	579 aa		31.3	■■■□□ 2.6
VEGFA-231	ENST00000640499	IFIT3	O14879	490 aa	Known RBP	31.3	■■■□□ 2.6
VEGFA-231	ENST00000640499	ZBED4	O75132	1171 aa		31.3	■■■□□ 2.6
VEGFA-231	ENST00000640499	ADCK5	Q3MIX3	580 aa		31.3	■■■□□ 2.6
VEGFA-231	ENST00000640499	CPXCR1	Q8N123	301 aa		31.3	■■■□□ 2.6
VEGFA-231	ENST00000640499	SOCS4	Q8WXH5	440 aa		31.3	■■■□□ 2.6
VEGFA-231	ENST00000640499	SLC25A27	O95847	323 aa		31.29	■■■□□ 2.6
VEGFA-231	ENST00000640499	HSPA4	P34932	840 aa		31.29	■■■□□ 2.6
VEGFA-231	ENST00000640499	MAP2K5	Q13163	448 aa		31.29	■■■□□ 2.6
VEGFA-231	ENST00000640499	SLAIN1	Q8ND83	568 aa		31.29	■■■□□ 2.6
VEGFA-231	ENST00000640499	TEX13B	Q9BXU2	312 aa		31.29	■■■□□ 2.6
VEGFA-231	ENST00000640499	CPVL	Q9H3G5	476 aa		31.29	■■■□□ 2.6
VEGFA-231	ENST00000640499	SMCHD1	A6NHR9	2005 aa		31.28	■■■□□ 2.6
VEGFA-231	ENST00000640499	XRCC5	P13010	732 aa	Known RBP	31.28	■■■□□ 2.6
VEGFA-231	ENST00000640499	IK	Q13123	557 aa	Predicted RBP	31.28	■■■□□ 2.6
VEGFA-231	ENST00000640499	SNRNP48	Q6IEG0	339 aa	Known RBP	31.28	■■■□□ 2.6
VEGFA-231	ENST00000640499	TRIB2	Q92519	343 aa		31.28	■■■□□ 2.6
VEGFA-231	ENST00000640499	PRC1	O43663	620 aa		31.27	■■■□□ 2.6
VEGFA-231	ENST00000640499	COBL	O75128	1261 aa		31.27	■■■□□ 2.6
VEGFA-231	ENST00000640499	OAZ1	P54368	228 aa		31.27	■■■□□ 2.6
VEGFA-231	ENST00000640499	MTFR1	Q15390	333 aa		31.27	■■■□□ 2.6
VEGFA-231	ENST00000640499	CCL14	Q16627	93 aa		31.27	■■■□□ 2.6
VEGFA-231	ENST00000640499	SYDE2	Q5VT97	1194 aa		31.27	■■■□□ 2.6
VEGFA-231	ENST00000640499	RNF20	Q5VTR2	975 aa		31.27	■■■□□ 2.6
VEGFA-231	ENST00000640499	NPLOC4	Q8TAT6	608 aa		31.27	■■■□□ 2.6
VEGFA-231	ENST00000640499	AGBL1	Q96MI9	1066 aa		31.27	■■■□□ 2.6
VEGFA-231	ENST00000640499	RANBP17	Q9H2T7	1088 aa	Known RBP	31.27	■■■□□ 2.6
VEGFA-231	ENST00000640499	LY9	Q9HBG7	655 aa		31.27	■■■□□ 2.6
VEGFA-231	ENST00000640499	ZNFX1	Q9P2E3	1918 aa	Known RBP	31.27	■■■□□ 2.6
VEGFA-231	ENST00000640499	ZNF236	Q9UL36	1845 aa		31.26	■■■□□ 2.6
VEGFA-231	ENST00000640499	STRN	O43815	780 aa		31.26	■■■□□ 2.59
VEGFA-231	ENST00000640499	REC8	O95072	547 aa		31.26	■■■□□ 2.59
VEGFA-231	ENST00000640499	FDX1	P10109	184 aa		31.26	■■■□□ 2.59
VEGFA-231	ENST00000640499	TRIM32	Q13049	653 aa		31.26	■■■□□ 2.59
VEGFA-231	ENST00000640499	TMEM67	Q5HYA8	995 aa		31.26	■■■□□ 2.59
VEGFA-231	ENST00000640499	NBPF11	Q86T75	865 aa		31.26	■■■□□ 2.59
VEGFA-231	ENST00000640499	UBA5	Q9GZZ9	404 aa		31.26	■■■□□ 2.59
VEGFA-231	ENST00000640499	MYC	P01106	439 aa	Predicted RBP	31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	IGHA2	P01877	340 aa		31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	HOXC6	P09630	235 aa		31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	TAL1	P17542	331 aa	Predicted RBP	31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	ADORA2A	P29274	412 aa		31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	MCM5	P33992	734 aa		31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	RGS2	P41220	211 aa		31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	WTAP	Q15007	396 aa		31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	STAG2	Q8N3U4	1231 aa		31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	USP26	Q9BXU7	913 aa		31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	CWC22	Q9HCG8	908 aa	Known RBP	31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	FLRT1	Q9NZU1	646 aa		31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	IVNS1ABP	Q9Y6Y0	642 aa		31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	BRCA2	P51587	3418 aa		31.25	■■■□□ 2.59
VEGFA-231	ENST00000640499	INHA	P05111	366 aa		31.24	■■■□□ 2.59
VEGFA-231	ENST00000640499	SOX10	P56693	466 aa		31.24	■■■□□ 2.59
VEGFA-231	ENST00000640499	EXOSC10	Q01780	885 aa	Known RBP	31.24	■■■□□ 2.59
VEGFA-231	ENST00000640499	TROAP	Q12815	778 aa		31.24	■■■□□ 2.59
VEGFA-231	ENST00000640499	GPATCH4	Q5T3I0	446 aa	Known RBP	31.24	■■■□□ 2.59
VEGFA-231	ENST00000640499	CCDC174	Q6PII3	467 aa		31.24	■■■□□ 2.59
VEGFA-231	ENST00000640499	ABRA	Q8N0Z2	381 aa		31.24	■■■□□ 2.59
VEGFA-231	ENST00000640499	NEK1	Q96PY6	1258 aa		31.24	■■■□□ 2.59
VEGFA-231	ENST00000640499	MTA3	Q9BTC8	594 aa		31.24	■■■□□ 2.59
VEGFA-231	ENST00000640499	SNX14	Q9Y5W7	946 aa		31.24	■■■□□ 2.59
VEGFA-231	ENST00000640499	SH2B2	O14492	632 aa	Predicted RBP	31.23	■■■□□ 2.59
VEGFA-231	ENST00000640499	SLC4A3	P48751	1232 aa		31.23	■■■□□ 2.59
VEGFA-231	ENST00000640499	APBA2	Q99767	749 aa		31.23	■■■□□ 2.59
VEGFA-231	ENST00000640499	LRRC2	Q9BYS8	371 aa		31.23	■■■□□ 2.59
VEGFA-231	ENST00000640499	SART3	Q15020	963 aa	Known RBP	31.22	■■■□□ 2.59
VEGFA-231	ENST00000640499	SLC35G1	Q2M3R5	365 aa		31.22	■■■□□ 2.59
VEGFA-231	ENST00000640499	MAD2L2	Q9UI95	211 aa		31.22	■■■□□ 2.59

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms