RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-223ENST00000640091 GMCL1Q96IK5 515 aa12.04□□□□□ -0.48
NECAP1-223ENST00000640091 TAF1DQ9H5J8 278 aaPredicted RBP12.04□□□□□ -0.48
NECAP1-223ENST00000640091 PPP2R3BQ9Y5P8 575 aa12.04□□□□□ -0.48
NECAP1-223ENST00000640091 POLR2AP24928 1970 aaKnown RBP12.03□□□□□ -0.48
NECAP1-223ENST00000640091 PPP1R11O60927 126 aaPredicted RBP12.03□□□□□ -0.48
NECAP1-223ENST00000640091 USP2O75604 605 aaPredicted RBP12.03□□□□□ -0.48
NECAP1-223ENST00000640091 TOB1P50616 345 aaPredicted RBP12.03□□□□□ -0.48
NECAP1-223ENST00000640091 NAPAP54920 295 aa12.03□□□□□ -0.48
NECAP1-223ENST00000640091 CSPP1Q1MSJ5 1256 aa12.03□□□□□ -0.48
NECAP1-223ENST00000640091 KLHL40Q2TBA0 621 aa12.03□□□□□ -0.48
NECAP1-223ENST00000640091 SAMD1Q6SPF0 538 aaPredicted RBP12.03□□□□□ -0.48
NECAP1-223ENST00000640091 RASGRP4Q8TDF6 673 aa12.03□□□□□ -0.48
NECAP1-223ENST00000640091 HOOK2Q96ED9 719 aa12.03□□□□□ -0.48
NECAP1-223ENST00000640091 PGBD1Q96JS3 809 aa12.03□□□□□ -0.48
NECAP1-223ENST00000640091 FEZ1Q99689 392 aa12.03□□□□□ -0.48
NECAP1-223ENST00000640091 VCPKMTQ9H867 229 aa12.03□□□□□ -0.48
NECAP1-223ENST00000640091 GOPCQ9HD26 462 aa12.03□□□□□ -0.48
NECAP1-223ENST00000640091 SH3GLB2Q9NR46 395 aa12.03□□□□□ -0.48
NECAP1-223ENST00000640091 ZNF112Q9UJU3 913 aa12.03□□□□□ -0.48
NECAP1-223ENST00000640091 RCOR1Q9UKL0 485 aa12.03□□□□□ -0.48
NECAP1-223ENST00000640091 PNMA6FA0A0J9YX94 578 aa12.02□□□□□ -0.48
NECAP1-223ENST00000640091 POTEIP0CG38 1075 aa12.02□□□□□ -0.48
NECAP1-223ENST00000640091 POTEJP0CG39 1038 aa12.02□□□□□ -0.48
NECAP1-223ENST00000640091 DEKP35659 375 aaKnown RBP12.02□□□□□ -0.48
NECAP1-223ENST00000640091 UBE2HP62256 183 aa12.02□□□□□ -0.48
NECAP1-223ENST00000640091 SF3A1Q15459 793 aaKnown RBP12.02□□□□□ -0.48
NECAP1-223ENST00000640091 CAVIN1Q6NZI2 390 aaKnown RBP12.02□□□□□ -0.48
NECAP1-223ENST00000640091 BRMS1Q9HCU9 246 aa12.02□□□□□ -0.48
NECAP1-223ENST00000640091 RTEL1Q9NZ71 1219 aa12.02□□□□□ -0.48
NECAP1-223ENST00000640091 MYH6P13533 1939 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
NECAP1-223ENST00000640091 SMCO2A6NFE2 343 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 ZBTB5O15062 677 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 SPP2Q13103 211 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 ANO1Q5XXA6 986 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 ATL3Q6DD88 541 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 PIK3AP1Q6ZUJ8 805 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 SCYL3Q8IZE3 742 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 BLIDQ8IZY5 108 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 LINC00301Q8NCQ3 95 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 PCDHA4Q9UN74 947 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 CLEC11AQ9Y240 323 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 ZHX2Q9Y6X8 837 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 SSC5DA1L4H1 1573 aa12.02□□□□□ -0.49
NECAP1-223ENST00000640091 ELP1O95163 1332 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 IQCA1LA6NCM1 817 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 GOLGA6L4A6NEF3 574 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 PTPRAP18433 802 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 MTMR2Q13614 643 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 STK38Q15208 465 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 QRICH1Q2TAL8 776 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 TNFRSF25Q93038 417 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 SH2D4AQ9H788 454 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 PICK1Q9NRD5 415 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 POLR3EQ9NVU0 708 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 SYNPO2Q9UMS6 1093 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 PCDHB6Q9Y5E3 794 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 TRIM75PA6NK02 468 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 CALML3P27482 149 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 MARCKSP29966 332 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-223ENST00000640091 ME1P48163 572 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 CDC37Q16543 378 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-223ENST00000640091 SYDE2Q5VT97 1194 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 MOB2Q70IA6 237 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 CCDC148Q8NFR7 591 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 ZC3H15Q8WU90 426 aaKnown RBP12.01□□□□□ -0.49
NECAP1-223ENST00000640091 KIFC2Q96AC6 838 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 MTMR8Q96EF0 704 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 ZMYND12Q9H0C1 365 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 FBXO28Q9NVF7 368 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 PRR12Q9ULL5 1215 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 PCDHA6Q9UN73 950 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 PCDHA8Q9Y5H6 950 aa12.01□□□□□ -0.49
NECAP1-223ENST00000640091 WNT7AO00755 349 aa12□□□□□ -0.49
NECAP1-223ENST00000640091 TAL1P17542 331 aaPredicted RBP12□□□□□ -0.49
NECAP1-223ENST00000640091 NASPP49321 788 aaPredicted RBP12□□□□□ -0.49
NECAP1-223ENST00000640091 STAT2P52630 851 aa12□□□□□ -0.49
NECAP1-223ENST00000640091 RILPL1Q5EBL4 403 aa12□□□□□ -0.49
NECAP1-223ENST00000640091 PPP1R3FQ6ZSY5 799 aaPredicted RBP12□□□□□ -0.49
NECAP1-223ENST00000640091 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12□□□□□ -0.49
NECAP1-223ENST00000640091 CDCA5Q96FF9 252 aa12□□□□□ -0.49
NECAP1-223ENST00000640091 RRAGCQ9HB90 399 aa12□□□□□ -0.49
NECAP1-223ENST00000640091 TMEM63CQ9P1W3 806 aa12□□□□□ -0.49
NECAP1-223ENST00000640091 PCDHA7Q9UN72 937 aa12□□□□□ -0.49
NECAP1-223ENST00000640091 M0R2N6 131 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 SPTLC2O15270 562 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 PPP1R12BO60237 982 aaPredicted RBP11.99□□□□□ -0.49
NECAP1-223ENST00000640091 MBD3O95983 291 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 FMR1Q06787 632 aaKnown RBP eCLIP11.99□□□□□ -0.49
NECAP1-223ENST00000640091 SLC39A14Q15043 492 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 USH1GQ495M9 461 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 BTNL9Q6UXG8 535 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 PNMA8AQ86V59 439 aaPredicted RBP11.99□□□□□ -0.49
NECAP1-223ENST00000640091 CCDC12Q8WUD4 166 aaPredicted RBP11.99□□□□□ -0.49
NECAP1-223ENST00000640091 KIAA1683Q9H0B3 1180 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 C6orf50Q9HD87 102 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 BIN2Q9UBW5 565 aaPredicted RBP11.99□□□□□ -0.49
NECAP1-223ENST00000640091 PCDHA1Q9Y5I3 950 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 GNA11P29992 359 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms