RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 MARCH10Q8NA82 808 aaPredicted RBP7.89□□□□□ -1.15
ATM-229ENST00000639953 FLCNQ8NFG4 579 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 EXOC6Q8TAG9 804 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 STK35Q8TDR2 534 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 FANCD2OSQ96PS1 177 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 PAK6Q9NQU5 681 aaPredicted RBP7.89□□□□□ -1.15
ATM-229ENST00000639953 DISC1Q9NRI5 854 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 SBF2Q86WG5 1849 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 TNS2Q63HR2 1409 aa7.88□□□□□ -1.15
ATM-229ENST00000639953 EXOC5O00471 708 aa7.88□□□□□ -1.15
ATM-229ENST00000639953 SLFN14P0C7P3 912 aa7.88□□□□□ -1.15
ATM-229ENST00000639953 CDK5R2Q13319 367 aa7.88□□□□□ -1.15
ATM-229ENST00000639953 TMC7Q7Z402 723 aa7.88□□□□□ -1.15
ATM-229ENST00000639953 TRMT2AQ8IZ69 625 aaKnown RBP7.88□□□□□ -1.15
ATM-229ENST00000639953 DMRTB1Q96MA1 342 aa7.88□□□□□ -1.15
ATM-229ENST00000639953 TNS1Q9HBL0 1735 aaKnown RBP7.88□□□□□ -1.15
ATM-229ENST00000639953 RGPD1P0DJD0 1748 aa7.87□□□□□ -1.15
ATM-229ENST00000639953 SYNGAP1Q96PV0 1343 aa7.87□□□□□ -1.15
ATM-229ENST00000639953 SOWAHDA6NJG2 315 aa7.87□□□□□ -1.15
ATM-229ENST00000639953 TRIM37O94972 964 aa7.87□□□□□ -1.15
ATM-229ENST00000639953 GSTP1P09211 210 aaKnown RBP7.87□□□□□ -1.15
ATM-229ENST00000639953 BNIP3Q12983 259 aa7.87□□□□□ -1.15
ATM-229ENST00000639953 PTF1AQ7RTS3 328 aa7.87□□□□□ -1.15
ATM-229ENST00000639953 SKAP1Q86WV1 359 aa7.87□□□□□ -1.15
ATM-229ENST00000639953 ALKBH8Q96BT7 664 aaKnown RBP7.87□□□□□ -1.15
ATM-229ENST00000639953 BCO2Q9BYV7 579 aa7.87□□□□□ -1.15
ATM-229ENST00000639953 PPP4R2Q9NY27 417 aa7.87□□□□□ -1.15
ATM-229ENST00000639953 GPN3Q9UHW5 284 aaPredicted RBP7.87□□□□□ -1.15
ATM-229ENST00000639953 RRP7AQ9Y3A4 280 aaKnown RBP7.87□□□□□ -1.15
ATM-229ENST00000639953 NCAPD2Q15021 1401 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 RNGTTO60942 597 aaKnown RBP7.86□□□□□ -1.15
ATM-229ENST00000639953 FAM87AP0C7U9 286 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 IL13P35225 146 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 RRP1P56182 461 aaKnown RBP7.86□□□□□ -1.15
ATM-229ENST00000639953 ID3Q02535 119 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 SLFN5Q08AF3 891 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 TTLL4Q14679 1199 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 KIF4BQ2VIQ3 1234 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 NXPE4Q6UWF7 544 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 ZNF574Q6ZN55 896 aaPredicted RBP7.86□□□□□ -1.15
ATM-229ENST00000639953 SPRED2Q7Z698 418 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 DEFB132Q7Z7B7 95 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 PDZD3Q86UT5 571 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 AEBP1Q8IUX7 1158 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 BCL7CQ8WUZ0 217 aaPredicted RBP7.86□□□□□ -1.15
ATM-229ENST00000639953 RAPGEF4Q8WZA2 1011 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 KCNB2Q92953 911 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 TMEM39AQ9NV64 488 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 BIN2Q9UBW5 565 aaPredicted RBP7.86□□□□□ -1.15
ATM-229ENST00000639953 AKAP2Q9Y2D5 859 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 PCDHGC5Q9Y5F6 944 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 COL3A1P02461 1466 aaPredicted RBP7.86□□□□□ -1.15
ATM-229ENST00000639953 OVOS2A0A0G2JMS6 1433 aa7.86□□□□□ -1.15
ATM-229ENST00000639953 IGSF1Q8N6C5 1336 aa7.85□□□□□ -1.15
ATM-229ENST00000639953 HCLS1P14317 486 aaPredicted RBP7.85□□□□□ -1.15
ATM-229ENST00000639953 MPRIPQ6WCQ1 1025 aa7.85□□□□□ -1.15
ATM-229ENST00000639953 FAM196AQ6ZSG2 479 aa7.85□□□□□ -1.15
ATM-229ENST00000639953 WFDC3Q8IUB2 231 aa7.85□□□□□ -1.15
ATM-229ENST00000639953 SMYD4Q8IYR2 804 aaPredicted RBP7.85□□□□□ -1.15
ATM-229ENST00000639953 ZCRB1Q8TBF4 217 aaKnown RBP7.85□□□□□ -1.15
ATM-229ENST00000639953 ACSBG1Q96GR2 724 aa7.85□□□□□ -1.15
ATM-229ENST00000639953 PIDD1Q9HB75 910 aa7.85□□□□□ -1.15
ATM-229ENST00000639953 RCAN3Q9UKA8 241 aa7.85□□□□□ -1.15
ATM-229ENST00000639953 U3KQE9 123 aa7.85□□□□□ -1.15
ATM-229ENST00000639953 PKD1L3Q7Z443 1732 aa7.85□□□□□ -1.15
ATM-229ENST00000639953 DOT1LQ8TEK3 1739 aa7.84□□□□□ -1.15
ATM-229ENST00000639953 KCNQ2O43526 872 aa7.84□□□□□ -1.15
ATM-229ENST00000639953 LEFTY1O75610 366 aa7.84□□□□□ -1.15
ATM-229ENST00000639953 HMOX1P09601 288 aa7.84□□□□□ -1.15
ATM-229ENST00000639953 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.84□□□□□ -1.15
ATM-229ENST00000639953 CYP27C1Q4G0S4 372 aa7.84□□□□□ -1.15
ATM-229ENST00000639953 SULT6B1Q6IMI4 303 aa7.84□□□□□ -1.15
ATM-229ENST00000639953 FAM181AQ8N9Y4 354 aa7.84□□□□□ -1.15
ATM-229ENST00000639953 CRBNQ96SW2 442 aa7.84□□□□□ -1.15
ATM-229ENST00000639953 ATXN3LQ9H3M9 355 aa7.84□□□□□ -1.15
ATM-229ENST00000639953 TNNQ9UQP3 1299 aa7.84□□□□□ -1.15
ATM-229ENST00000639953 SLC5A6Q9Y289 635 aa7.84□□□□□ -1.15
ATM-229ENST00000639953 KAT6BQ8WYB5 2073 aa7.83□□□□□ -1.16
ATM-229ENST00000639953 NHSQ6T4R5 1651 aa7.83□□□□□ -1.16
ATM-229ENST00000639953 BTBD11A6QL63 1104 aa7.83□□□□□ -1.16
ATM-229ENST00000639953 U2SURPO15042 1029 aaKnown RBP7.83□□□□□ -1.16
ATM-229ENST00000639953 CYP27B1O15528 508 aa7.83□□□□□ -1.16
ATM-229ENST00000639953 DIAPH1O60610 1272 aaKnown RBP7.83□□□□□ -1.16
ATM-229ENST00000639953 PLCB3Q01970 1234 aa7.83□□□□□ -1.16
ATM-229ENST00000639953 DSC3Q14574 896 aa7.83□□□□□ -1.16
ATM-229ENST00000639953 WDR43Q15061 677 aaKnown RBP eCLIP7.83□□□□□ -1.16
ATM-229ENST00000639953 PLD6Q8N2A8 252 aaKnown RBP7.83□□□□□ -1.16
ATM-229ENST00000639953 KRT82Q9NSB4 513 aa7.83□□□□□ -1.16
ATM-229ENST00000639953 TOGARAM1Q9Y4F4 1720 aa7.83□□□□□ -1.16
ATM-229ENST00000639953 NEFMP07197 916 aa7.82□□□□□ -1.16
ATM-229ENST00000639953 YBX3P16989 372 aaKnown RBP eCLIP7.82□□□□□ -1.16
ATM-229ENST00000639953 ARNTP27540 789 aa7.82□□□□□ -1.16
ATM-229ENST00000639953 PPP2R3AQ06190 1150 aa7.82□□□□□ -1.16
ATM-229ENST00000639953 EZH2Q15910 746 aaKnown RBP7.82□□□□□ -1.16
ATM-229ENST00000639953 MAP1SQ66K74 1059 aaPredicted RBP7.82□□□□□ -1.16
ATM-229ENST00000639953 SULF2Q8IWU5 870 aa7.82□□□□□ -1.16
ATM-229ENST00000639953 AGBL5Q8NDL9 886 aa7.82□□□□□ -1.16
ATM-229ENST00000639953 PLEKHF1Q96S99 279 aa7.82□□□□□ -1.16
ATM-229ENST00000639953 PCOLCE2Q9UKZ9 415 aa7.82□□□□□ -1.16
ATM-229ENST00000639953 BTAF1O14981 1849 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms