RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 FAM160B2Q86V87 743 aa20.92■□□□□ 0.94
PTPN11-207ENST00000639857 NBPF3Q9H094 633 aa20.92■□□□□ 0.94
PTPN11-207ENST00000639857 TOMM22Q9NS69 142 aa20.92■□□□□ 0.94
PTPN11-207ENST00000639857 CTNNA3Q9UI47 895 aa20.92■□□□□ 0.94
PTPN11-207ENST00000639857 ZNF213O14771 459 aa20.91■□□□□ 0.94
PTPN11-207ENST00000639857 TFRCP02786 760 aaKnown RBP20.91■□□□□ 0.94
PTPN11-207ENST00000639857 SLC1A4P43007 532 aa20.91■□□□□ 0.94
PTPN11-207ENST00000639857 STAT2P52630 851 aa20.91■□□□□ 0.94
PTPN11-207ENST00000639857 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.91■□□□□ 0.94
PTPN11-207ENST00000639857 CHURC1Q8WUH1 139 aa20.91■□□□□ 0.94
PTPN11-207ENST00000639857 RUFY2Q8WXA3 655 aa20.91■□□□□ 0.94
PTPN11-207ENST00000639857 HTATIP2Q9BUP3 242 aa20.91■□□□□ 0.94
PTPN11-207ENST00000639857 SLC38A10Q9HBR0 1119 aa20.91■□□□□ 0.94
PTPN11-207ENST00000639857 INCENPQ9NQS7 918 aa20.91■□□□□ 0.94
PTPN11-207ENST00000639857 ZBED4O75132 1171 aa20.9■□□□□ 0.94
PTPN11-207ENST00000639857 HAND2P61296 217 aa20.9■□□□□ 0.94
PTPN11-207ENST00000639857 TBC1D10CQ8IV04 446 aa20.9■□□□□ 0.94
PTPN11-207ENST00000639857 NPLOC4Q8TAT6 608 aa20.9■□□□□ 0.94
PTPN11-207ENST00000639857 ESR2Q92731 530 aa20.9■□□□□ 0.94
PTPN11-207ENST00000639857 TTC14Q96N46 770 aa20.9■□□□□ 0.94
PTPN11-207ENST00000639857 FLRT1Q9NZU1 646 aa20.9■□□□□ 0.94
PTPN11-207ENST00000639857 OGDHLQ9ULD0 1010 aa20.9■□□□□ 0.94
PTPN11-207ENST00000639857 NMT2O60551 498 aa20.89■□□□□ 0.93
PTPN11-207ENST00000639857 MSCO60682 206 aa20.89■□□□□ 0.93
PTPN11-207ENST00000639857 TOP1P11387 765 aaKnown RBP20.89■□□□□ 0.93
PTPN11-207ENST00000639857 KCTD2Q14681 263 aa20.89■□□□□ 0.93
PTPN11-207ENST00000639857 IMMTQ16891 758 aaKnown RBP20.89■□□□□ 0.93
PTPN11-207ENST00000639857 RRP12Q5JTH9 1297 aaKnown RBP20.89■□□□□ 0.93
PTPN11-207ENST00000639857 KIFC2Q96AC6 838 aa20.89■□□□□ 0.93
PTPN11-207ENST00000639857 MMP19Q99542 508 aa20.89■□□□□ 0.93
PTPN11-207ENST00000639857 DIS3Q9Y2L1 958 aaKnown RBP20.89■□□□□ 0.93
PTPN11-207ENST00000639857 CTDP1Q9Y5B0 961 aaPredicted RBP20.89■□□□□ 0.93
PTPN11-207ENST00000639857 COBLO75128 1261 aa20.88■□□□□ 0.93
PTPN11-207ENST00000639857 SNRNP48Q6IEG0 339 aaKnown RBP20.88■□□□□ 0.93
PTPN11-207ENST00000639857 RCSD1Q6JBY9 416 aa20.88■□□□□ 0.93
PTPN11-207ENST00000639857 DCAF4Q8WV16 495 aa20.88■□□□□ 0.93
PTPN11-207ENST00000639857 ALPK3Q96L96 1907 aa20.87■□□□□ 0.93
PTPN11-207ENST00000639857 TMEM232C9JQI7 657 aa20.87■□□□□ 0.93
PTPN11-207ENST00000639857 MCCP23508 829 aa20.87■□□□□ 0.93
PTPN11-207ENST00000639857 CCDC178Q5BJE1 867 aa20.87■□□□□ 0.93
PTPN11-207ENST00000639857 CENPQQ7L2Z9 268 aaPredicted RBP20.87■□□□□ 0.93
PTPN11-207ENST00000639857 MAML3Q96JK9 1138 aa20.87■□□□□ 0.93
PTPN11-207ENST00000639857 FBXO40Q9UH90 709 aa20.87■□□□□ 0.93
PTPN11-207ENST00000639857 NRBP1Q9UHY1 535 aa20.87■□□□□ 0.93
PTPN11-207ENST00000639857 NEDD4P46934 1319 aa20.86■□□□□ 0.93
PTPN11-207ENST00000639857 CYBAP13498 195 aa20.86■□□□□ 0.93
PTPN11-207ENST00000639857 CHMLP26374 656 aa20.86■□□□□ 0.93
PTPN11-207ENST00000639857 CCND3P30281 292 aaPredicted RBP20.86■□□□□ 0.93
PTPN11-207ENST00000639857 NECAB2Q7Z6G3 386 aa20.86■□□□□ 0.93
PTPN11-207ENST00000639857 CHST13Q8NET6 341 aa20.86■□□□□ 0.93
PTPN11-207ENST00000639857 LHX8Q68G74 356 aa20.85■□□□□ 0.93
PTPN11-207ENST00000639857 IQCA1Q86XH1 822 aa20.85■□□□□ 0.93
PTPN11-207ENST00000639857 DGKHQ86XP1 1220 aa20.85■□□□□ 0.93
PTPN11-207ENST00000639857 MSL3Q8N5Y2 521 aaKnown RBP20.85■□□□□ 0.93
PTPN11-207ENST00000639857 TMEM47Q9BQJ4 181 aa20.85■□□□□ 0.93
PTPN11-207ENST00000639857 CNNM2Q9H8M5 875 aa20.85■□□□□ 0.93
PTPN11-207ENST00000639857 ISY1Q9ULR0 285 aaKnown RBP20.85■□□□□ 0.93
PTPN11-207ENST00000639857 CYP2C19P33261 490 aa20.84■□□□□ 0.93
PTPN11-207ENST00000639857 IKQ13123 557 aaPredicted RBP20.84■□□□□ 0.93
PTPN11-207ENST00000639857 ZNF792Q3KQV3 632 aa20.84■□□□□ 0.93
PTPN11-207ENST00000639857 TKFCQ3LXA3 575 aa20.84■□□□□ 0.93
PTPN11-207ENST00000639857 BTNL9Q6UXG8 535 aa20.84■□□□□ 0.93
PTPN11-207ENST00000639857 CPXCR1Q8N123 301 aa20.84■□□□□ 0.93
PTPN11-207ENST00000639857 KRT23Q9C075 422 aa20.84■□□□□ 0.93
PTPN11-207ENST00000639857 IL25Q9H293 177 aa20.84■□□□□ 0.93
PTPN11-207ENST00000639857 DDX20Q9UHI6 824 aaKnown RBP20.84■□□□□ 0.93
PTPN11-207ENST00000639857 RIPK3Q9Y572 518 aa20.84■□□□□ 0.93
PTPN11-207ENST00000639857 DNAJC25-GNG10A0A024R161 153 aa20.83■□□□□ 0.93
PTPN11-207ENST00000639857 KCTD1Q719H9 257 aa20.83■□□□□ 0.93
PTPN11-207ENST00000639857 PAWRQ96IZ0 340 aaKnown RBP20.83■□□□□ 0.93
PTPN11-207ENST00000639857 RAVER2Q9HCJ3 691 aaKnown RBP20.83■□□□□ 0.93
PTPN11-207ENST00000639857 PDHBP11177 359 aa20.82■□□□□ 0.92
PTPN11-207ENST00000639857 MNX1P50219 401 aaPredicted RBP20.82■□□□□ 0.92
PTPN11-207ENST00000639857 CCDC96Q2M329 555 aa20.82■□□□□ 0.92
PTPN11-207ENST00000639857 ZNF467Q7Z7K2 595 aaPredicted RBP20.82■□□□□ 0.92
PTPN11-207ENST00000639857 ANKS1AQ92625 1134 aa20.82■□□□□ 0.92
PTPN11-207ENST00000639857 PNMA2Q9UL42 364 aa20.82■□□□□ 0.92
PTPN11-207ENST00000639857 PRR12Q9ULL5 1215 aa20.82■□□□□ 0.92
PTPN11-207ENST00000639857 SGSM2O43147 1006 aa20.81■□□□□ 0.92
PTPN11-207ENST00000639857 SEPT4O43236 478 aa20.81■□□□□ 0.92
PTPN11-207ENST00000639857 KDM4AO75164 1064 aa20.81■□□□□ 0.92
PTPN11-207ENST00000639857 PGK2P07205 417 aa20.81■□□□□ 0.92
PTPN11-207ENST00000639857 SNHG28P0DPA3 235 aa20.81■□□□□ 0.92
PTPN11-207ENST00000639857 TRPV1Q8NER1 839 aa20.81■□□□□ 0.92
PTPN11-207ENST00000639857 DIS3LQ8TF46 1054 aaKnown RBP20.81■□□□□ 0.92
PTPN11-207ENST00000639857 DPF3Q92784 378 aa20.81■□□□□ 0.92
PTPN11-207ENST00000639857 DDX11Q96FC9 970 aa20.81■□□□□ 0.92
PTPN11-207ENST00000639857 TINF2Q9BSI4 451 aa20.81■□□□□ 0.92
PTPN11-207ENST00000639857 ACAD9Q9H845 621 aa20.81■□□□□ 0.92
PTPN11-207ENST00000639857 NR2E3Q9Y5X4 410 aa20.81■□□□□ 0.92
PTPN11-207ENST00000639857 MCM3APO60318 1980 aa20.81■□□□□ 0.92
PTPN11-207ENST00000639857 ZNF536O15090 1300 aa20.8■□□□□ 0.92
PTPN11-207ENST00000639857 SYNGAP1Q96PV0 1343 aa20.8■□□□□ 0.92
PTPN11-207ENST00000639857 SMCHD1A6NHR9 2005 aa20.8■□□□□ 0.92
PTPN11-207ENST00000639857 B4E1Z4 1266 aa20.8■□□□□ 0.92
PTPN11-207ENST00000639857 CNGA1P29973 690 aa20.8■□□□□ 0.92
PTPN11-207ENST00000639857 GPATCH4Q5T3I0 446 aaKnown RBP20.8■□□□□ 0.92
PTPN11-207ENST00000639857 MAMDC4Q6UXC1 1216 aa20.8■□□□□ 0.92
PTPN11-207ENST00000639857 RANBP17Q9H2T7 1088 aaKnown RBP20.8■□□□□ 0.92
PTPN11-207ENST00000639857 C11orf49Q9H6J7 331 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms