RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 ATRNL1Q5VV63 1379 aa18.92■□□□□ 0.62
HCG27-205ENST00000638546 COL2A1P02458 1487 aaPredicted RBP18.92■□□□□ 0.62
HCG27-205ENST00000638546 SMCO2A6NFE2 343 aa18.92■□□□□ 0.62
HCG27-205ENST00000638546 SPDYE2BA6NHP3 402 aa18.92■□□□□ 0.62
HCG27-205ENST00000638546 SPDYE6P0CI01 402 aa18.92■□□□□ 0.62
HCG27-205ENST00000638546 SLURP2P0DP57 97 aa18.92■□□□□ 0.62
HCG27-205ENST00000638546 GNA11P29992 359 aa18.92■□□□□ 0.62
HCG27-205ENST00000638546 GPATCH4Q5T3I0 446 aaKnown RBP18.92■□□□□ 0.62
HCG27-205ENST00000638546 KANK3Q6NY19 840 aa18.92■□□□□ 0.62
HCG27-205ENST00000638546 OGFOD1Q8N543 542 aa18.92■□□□□ 0.62
HCG27-205ENST00000638546 A0A087WWV3 80 aa18.91■□□□□ 0.62
HCG27-205ENST00000638546 FAM196BA6NMK8 535 aa18.91■□□□□ 0.62
HCG27-205ENST00000638546 BECN2A8MW95 431 aa18.91■□□□□ 0.62
HCG27-205ENST00000638546 POLR2DO15514 142 aaKnown RBP18.91■□□□□ 0.62
HCG27-205ENST00000638546 TMEM179Q6ZVK1 233 aa18.91■□□□□ 0.62
HCG27-205ENST00000638546 KRT25Q7Z3Z0 450 aa18.91■□□□□ 0.62
HCG27-205ENST00000638546 RASGRP4Q8TDF6 673 aa18.91■□□□□ 0.62
HCG27-205ENST00000638546 BPIFA3Q9BQP9 254 aa18.91■□□□□ 0.62
HCG27-205ENST00000638546 RTN4Q9NQC3 1192 aaKnown RBP18.91■□□□□ 0.62
HCG27-205ENST00000638546 SERTAD1Q9UHV2 236 aa18.91■□□□□ 0.62
HCG27-205ENST00000638546 ESYT2A0FGR8 921 aa18.9■□□□□ 0.62
HCG27-205ENST00000638546 MCM7P33993 719 aa18.9■□□□□ 0.62
HCG27-205ENST00000638546 MDM2Q00987 491 aaPredicted RBP18.9■□□□□ 0.62
HCG27-205ENST00000638546 ARL6IP4Q66PJ3 421 aaKnown RBP18.9■□□□□ 0.62
HCG27-205ENST00000638546 AGBL3Q8NEM8 1001 aa18.9■□□□□ 0.62
HCG27-205ENST00000638546 ZNF70Q9UC06 446 aaPredicted RBP18.9■□□□□ 0.62
HCG27-205ENST00000638546 BIN1O00499 593 aa18.89■□□□□ 0.62
HCG27-205ENST00000638546 EEF2P13639 858 aaKnown RBP18.89■□□□□ 0.62
HCG27-205ENST00000638546 PNOCQ13519 176 aa18.89■□□□□ 0.62
HCG27-205ENST00000638546 CCDC96Q2M329 555 aa18.89■□□□□ 0.62
HCG27-205ENST00000638546 ABCB5Q2M3G0 1257 aa18.89■□□□□ 0.62
HCG27-205ENST00000638546 USP49Q70CQ1 688 aa18.89■□□□□ 0.62
HCG27-205ENST00000638546 DHX40Q8IX18 779 aaKnown RBP18.89■□□□□ 0.62
HCG27-205ENST00000638546 C4orf32Q8N8J7 132 aa18.89■□□□□ 0.62
HCG27-205ENST00000638546 DCAF4Q8WV16 495 aa18.89■□□□□ 0.62
HCG27-205ENST00000638546 CCDC34Q96HJ3 373 aa18.89■□□□□ 0.62
HCG27-205ENST00000638546 KIF13BQ9NQT8 1826 aa18.89■□□□□ 0.61
HCG27-205ENST00000638546 PNMA6FA0A0J9YX94 578 aa18.89■□□□□ 0.61
HCG27-205ENST00000638546 DPCR1Q3MIW9 517 aa18.89■□□□□ 0.61
HCG27-205ENST00000638546 ADGRF4Q8IZF3 695 aa18.89■□□□□ 0.61
HCG27-205ENST00000638546 MTMR14Q8NCE2 650 aa18.89■□□□□ 0.61
HCG27-205ENST00000638546 FAM151AQ8WW52 585 aa18.89■□□□□ 0.61
HCG27-205ENST00000638546 JMJD4Q9H9V9 463 aa18.89■□□□□ 0.61
HCG27-205ENST00000638546 ZBTB12Q9Y330 459 aaPredicted RBP18.89■□□□□ 0.61
HCG27-205ENST00000638546 COL4A5P29400 1685 aa18.88■□□□□ 0.61
HCG27-205ENST00000638546 VWA3AA6NCI4 1184 aa18.88■□□□□ 0.61
HCG27-205ENST00000638546 TCP10L2B9ZVM9 353 aa18.88■□□□□ 0.61
HCG27-205ENST00000638546 ZNF75DP51815 510 aa18.88■□□□□ 0.61
HCG27-205ENST00000638546 SEPT2Q15019 361 aa18.88■□□□□ 0.61
HCG27-205ENST00000638546 POSTNQ15063 836 aa18.88■□□□□ 0.61
HCG27-205ENST00000638546 RBM26Q5T8P6 1007 aaKnown RBP18.88■□□□□ 0.61
HCG27-205ENST00000638546 PPP1R18Q6NYC8 613 aa18.88■□□□□ 0.61
HCG27-205ENST00000638546 SARM1Q6SZW1 724 aa18.88■□□□□ 0.61
HCG27-205ENST00000638546 SYMPKQ92797 1274 aaKnown RBP18.88■□□□□ 0.61
HCG27-205ENST00000638546 EPSTI1Q96J88 318 aa18.88■□□□□ 0.61
HCG27-205ENST00000638546 CSRNP1Q96S65 589 aa18.88■□□□□ 0.61
HCG27-205ENST00000638546 SGIP1Q9BQI5 828 aa18.88■□□□□ 0.61
HCG27-205ENST00000638546 HERC5Q9UII4 1024 aaKnown RBP18.88■□□□□ 0.61
HCG27-205ENST00000638546 BAZ2BQ9UIF8 2168 aaKnown RBP18.87■□□□□ 0.61
HCG27-205ENST00000638546 ACTN4O43707 911 aaKnown RBP18.87■□□□□ 0.61
HCG27-205ENST00000638546 MSNP26038 577 aaKnown RBP18.87■□□□□ 0.61
HCG27-205ENST00000638546 PTGER2P43116 358 aa18.87■□□□□ 0.61
HCG27-205ENST00000638546 ICA1Q05084 483 aa18.87■□□□□ 0.61
HCG27-205ENST00000638546 CXCL9Q07325 125 aa18.87■□□□□ 0.61
HCG27-205ENST00000638546 NONOQ15233 471 aaKnown RBP eCLIP18.87■□□□□ 0.61
HCG27-205ENST00000638546 INF2Q27J81 1249 aa18.87■□□□□ 0.61
HCG27-205ENST00000638546 SPDYE2Q495Y8 402 aa18.87■□□□□ 0.61
HCG27-205ENST00000638546 FKBP1CQ5VVH2 108 aa18.87■□□□□ 0.61
HCG27-205ENST00000638546 SLFN13Q68D06 897 aa18.87■□□□□ 0.61
HCG27-205ENST00000638546 TTBK2Q6IQ55 1244 aa18.87■□□□□ 0.61
HCG27-205ENST00000638546 AOPEPQ8N6M6 819 aa18.87■□□□□ 0.61
HCG27-205ENST00000638546 PYM1Q9BRP8 204 aaKnown RBP18.87■□□□□ 0.61
HCG27-205ENST00000638546 TRIM5Q9C035 493 aa18.87■□□□□ 0.61
HCG27-205ENST00000638546 TAOK3Q9H2K8 898 aa18.87■□□□□ 0.61
HCG27-205ENST00000638546 SPON1Q9HCB6 807 aa18.87■□□□□ 0.61
HCG27-205ENST00000638546 PCDHA5Q9Y5H7 936 aa18.87■□□□□ 0.61
HCG27-205ENST00000638546 GREB1LQ9C091 1923 aaPredicted RBP18.86■□□□□ 0.61
HCG27-205ENST00000638546 CLRN2A0PK11 232 aa18.86■□□□□ 0.61
HCG27-205ENST00000638546 SMTNL1A8MU46 457 aa18.86■□□□□ 0.61
HCG27-205ENST00000638546 GDF11O95390 407 aa18.86■□□□□ 0.61
HCG27-205ENST00000638546 LONP1P36776 959 aaKnown RBP18.86■□□□□ 0.61
HCG27-205ENST00000638546 IL17AQ16552 155 aa18.86■□□□□ 0.61
HCG27-205ENST00000638546 SHROOM1Q2M3G4 852 aaPredicted RBP18.86■□□□□ 0.61
HCG27-205ENST00000638546 PLA2G4DQ86XP0 818 aa18.86■□□□□ 0.61
HCG27-205ENST00000638546 SIAH1Q8IUQ4 282 aa18.86■□□□□ 0.61
HCG27-205ENST00000638546 PDILTQ8N807 584 aa18.86■□□□□ 0.61
HCG27-205ENST00000638546 DHX58Q96C10 678 aa18.86■□□□□ 0.61
HCG27-205ENST00000638546 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.86■□□□□ 0.61
HCG27-205ENST00000638546 ZKSCAN5Q9Y2L8 839 aa18.86■□□□□ 0.61
HCG27-205ENST00000638546 SIPA1L1O43166 1804 aa18.86■□□□□ 0.61
HCG27-205ENST00000638546 GOLGA6L6A8MZA4 724 aa18.85■□□□□ 0.61
HCG27-205ENST00000638546 LAD1O00515 517 aa18.85■□□□□ 0.61
HCG27-205ENST00000638546 FOXN1O15353 648 aa18.85■□□□□ 0.61
HCG27-205ENST00000638546 TPM3P06753 285 aa18.85■□□□□ 0.61
HCG27-205ENST00000638546 SLFN14P0C7P3 912 aa18.85■□□□□ 0.61
HCG27-205ENST00000638546 CLCN1P35523 988 aa18.85■□□□□ 0.61
HCG27-205ENST00000638546 ADCY7P51828 1080 aa18.85■□□□□ 0.61
HCG27-205ENST00000638546 CIAPIN1Q6FI81 312 aa18.85■□□□□ 0.61
HCG27-205ENST00000638546 KCTD1Q719H9 257 aa18.85■□□□□ 0.61
HCG27-205ENST00000638546 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms