RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 C7orf61Q8IZ16 206 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 ABRAQ8N0Z2 381 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 GMCL1P1Q8NEA9 526 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 LENG1Q96BZ8 264 aaPredicted RBP9.34□□□□□ -0.91
PNKP-229ENST00000637897 CHMP4CQ96CF2 233 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 SLF1Q9BQI6 1058 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 HTATIP2Q9BUP3 242 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 MROH8Q9H579 483 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 SLC38A10Q9HBR0 1119 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 RBM19Q9Y4C8 960 aaKnown RBP9.34□□□□□ -0.91
PNKP-229ENST00000637897 DDX49Q9Y6V7 483 aaKnown RBP9.34□□□□□ -0.91
PNKP-229ENST00000637897 LCTP09848 1927 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 MCM3APO60318 1980 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 DLL1O00548 723 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 EVI5O60447 810 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 SNAI1O95863 264 aaPredicted RBP9.33□□□□□ -0.92
PNKP-229ENST00000637897 SYN1P17600 705 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 CAPN2P17655 700 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 PTGS1P23219 599 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 SNAP25P60880 206 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 MFSD14CQ5VZR4 134 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 RCSD1Q6JBY9 416 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 DPP9Q86TI2 863 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 CHD1LQ86WJ1 897 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 TBC1D10CQ8IV04 446 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 CCAR1Q8IX12 1150 aaKnown RBP9.33□□□□□ -0.92
PNKP-229ENST00000637897 ZNF444Q8N0Y2 327 aaPredicted RBP9.33□□□□□ -0.92
PNKP-229ENST00000637897 DDRGK1Q96HY6 314 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 KATNBL1Q9H079 304 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 NAPBQ9H115 298 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 SH2D4AQ9H788 454 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 RAVER2Q9HCJ3 691 aaKnown RBP9.33□□□□□ -0.92
PNKP-229ENST00000637897 GOPCQ9HD26 462 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 HELLSQ9NRZ9 838 aa9.33□□□□□ -0.92
PNKP-229ENST00000637897 ORC4O43929 436 aa9.32□□□□□ -0.92
PNKP-229ENST00000637897 SLC25A27O95847 323 aa9.32□□□□□ -0.92
PNKP-229ENST00000637897 TTLL1O95922 423 aa9.32□□□□□ -0.92
PNKP-229ENST00000637897 GSPT1P15170 499 aaKnown RBP9.32□□□□□ -0.92
PNKP-229ENST00000637897 SDSP20132 328 aa9.32□□□□□ -0.92
PNKP-229ENST00000637897 MCMDC2Q4G0Z9 681 aa9.32□□□□□ -0.92
PNKP-229ENST00000637897 TMEM63BQ5T3F8 832 aa9.32□□□□□ -0.92
PNKP-229ENST00000637897 GJC2Q5T442 439 aaPredicted RBP9.32□□□□□ -0.92
PNKP-229ENST00000637897 SLFN13Q68D06 897 aa9.32□□□□□ -0.92
PNKP-229ENST00000637897 TTBK2Q6IQ55 1244 aa9.32□□□□□ -0.92
PNKP-229ENST00000637897 AMOTL1Q8IY63 956 aa9.32□□□□□ -0.92
PNKP-229ENST00000637897 LRCH3Q96II8 777 aa9.32□□□□□ -0.92
PNKP-229ENST00000637897 MMP19Q99542 508 aa9.32□□□□□ -0.92
PNKP-229ENST00000637897 IVNS1ABPQ9Y6Y0 642 aa9.32□□□□□ -0.92
PNKP-229ENST00000637897 A0A0C4DFX4 3053 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 MYADML2A6NDP7 307 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 CTAGE5O15320 804 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 SEPT4O43236 478 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 RAD21O60216 631 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 ADAMTS4O75173 837 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 TSPY3P0CV98 308 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 TSPY8P0CW00 308 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 FCER1AP12319 257 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 MCCP23508 829 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 MAGEA10P43363 369 aaPredicted RBP9.31□□□□□ -0.92
PNKP-229ENST00000637897 HAND2P61296 217 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 SNX17Q15036 470 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 SNRNP48Q6IEG0 339 aaKnown RBP9.31□□□□□ -0.92
PNKP-229ENST00000637897 CCSAPQ6IQ19 270 aaPredicted RBP9.31□□□□□ -0.92
PNKP-229ENST00000637897 KCTD1Q719H9 257 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 CPXCR1Q8N123 301 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 PRPF38AQ8NAV1 312 aaKnown RBP9.31□□□□□ -0.92
PNKP-229ENST00000637897 KIFC2Q96AC6 838 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 GMCL1Q96IK5 515 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 AGBL1Q96MI9 1066 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 PURBQ96QR8 312 aaKnown RBP9.31□□□□□ -0.92
PNKP-229ENST00000637897 TINF2Q9BSI4 451 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 TEX13BQ9BXU2 312 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 SYNPO2Q9UMS6 1093 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 DIS3Q9Y2L1 958 aaKnown RBP9.31□□□□□ -0.92
PNKP-229ENST00000637897 LAMA2P24043 3122 aaKnown RBP9.31□□□□□ -0.92
PNKP-229ENST00000637897 LTBP2Q14767 1821 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 ZMYM6O95789 1325 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 NEDD4P46934 1319 aa9.31□□□□□ -0.92
PNKP-229ENST00000637897 COL6A3P12111 3177 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 SOWAHBA6NEL2 793 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 TMEM232C9JQI7 657 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 DNM1LO00429 736 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 BMP3P12645 472 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 ITGB8P26012 769 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 CNGA1P29973 690 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 BMP8BP34820 402 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 ATN1P54259 1190 aaPredicted RBP9.3□□□□□ -0.92
PNKP-229ENST00000637897 CNTN2Q02246 1040 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 PDE4BQ07343 736 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 LRRC41Q15345 812 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 MUM1L1Q5H9M0 696 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 MAMDC4Q6UXC1 1216 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 SH3RF1Q7Z6J0 888 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 FAM133AQ8N9E0 248 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 TMEM47Q9BQJ4 181 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 NACAP1Q9BZK3 213 aa9.3□□□□□ -0.92
PNKP-229ENST00000637897 SENP6Q9GZR1 1112 aaPredicted RBP9.3□□□□□ -0.92
PNKP-229ENST00000637897 RWDD1Q9H446 243 aaPredicted RBP9.3□□□□□ -0.92
PNKP-229ENST00000637897 CWC22Q9HCG8 908 aaKnown RBP9.3□□□□□ -0.92
PNKP-229ENST00000637897 FEM1BQ9UK73 627 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms