RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 CCDC171Q6TFL3 1326 aa22.44■■□□□ 1.18
CLN6-221ENST00000637494 REPS2Q8NFH8 660 aa22.44■■□□□ 1.18
CLN6-221ENST00000637494 CHURC1Q8WUH1 139 aa22.44■■□□□ 1.18
CLN6-221ENST00000637494 DIAPH3Q9NSV4 1193 aa22.44■■□□□ 1.18
CLN6-221ENST00000637494 ZMYM6O95789 1325 aa22.43■■□□□ 1.18
CLN6-221ENST00000637494 FOXP2O15409 715 aa22.43■■□□□ 1.18
CLN6-221ENST00000637494 ORC4O43929 436 aa22.43■■□□□ 1.18
CLN6-221ENST00000637494 FGAP02671 866 aa22.43■■□□□ 1.18
CLN6-221ENST00000637494 HSPD1P10809 573 aaKnown RBP22.43■■□□□ 1.18
CLN6-221ENST00000637494 SDSP20132 328 aa22.43■■□□□ 1.18
CLN6-221ENST00000637494 SLC1A4P43007 532 aa22.43■■□□□ 1.18
CLN6-221ENST00000637494 FAM160B2Q86V87 743 aa22.43■■□□□ 1.18
CLN6-221ENST00000637494 C7orf61Q8IZ16 206 aa22.43■■□□□ 1.18
CLN6-221ENST00000637494 CPXCR1Q8N123 301 aa22.43■■□□□ 1.18
CLN6-221ENST00000637494 DDX11Q96FC9 970 aa22.43■■□□□ 1.18
CLN6-221ENST00000637494 DIS3Q9Y2L1 958 aaKnown RBP22.43■■□□□ 1.18
CLN6-221ENST00000637494 ATP2A1O14983 1001 aa22.42■■□□□ 1.18
CLN6-221ENST00000637494 MNX1P50219 401 aaPredicted RBP22.42■■□□□ 1.18
CLN6-221ENST00000637494 STAT2P52630 851 aa22.42■■□□□ 1.18
CLN6-221ENST00000637494 RRP12Q5JTH9 1297 aaKnown RBP22.42■■□□□ 1.18
CLN6-221ENST00000637494 ARRDC4Q8NCT1 418 aa22.42■■□□□ 1.18
CLN6-221ENST00000637494 GMCL1Q96IK5 515 aa22.42■■□□□ 1.18
CLN6-221ENST00000637494 FBXO40Q9UH90 709 aa22.42■■□□□ 1.18
CLN6-221ENST00000637494 NRBP1Q9UHY1 535 aa22.42■■□□□ 1.18
CLN6-221ENST00000637494 TMEM232C9JQI7 657 aa22.41■■□□□ 1.18
CLN6-221ENST00000637494 SEPT4O43236 478 aa22.41■■□□□ 1.18
CLN6-221ENST00000637494 PGK2P07205 417 aa22.41■■□□□ 1.18
CLN6-221ENST00000637494 OAZ1P54368 228 aa22.41■■□□□ 1.18
CLN6-221ENST00000637494 SLC38A10Q9HBR0 1119 aa22.41■■□□□ 1.18
CLN6-221ENST00000637494 IGHA2P01877 340 aa22.4■■□□□ 1.18
CLN6-221ENST00000637494 PCP11498 1178 aaKnown RBP22.4■■□□□ 1.18
CLN6-221ENST00000637494 MCCP23508 829 aa22.4■■□□□ 1.18
CLN6-221ENST00000637494 ZNF589Q86UQ0 364 aaPredicted RBP22.4■■□□□ 1.18
CLN6-221ENST00000637494 TRPV1Q8NER1 839 aa22.4■■□□□ 1.18
CLN6-221ENST00000637494 STAG1Q8WVM7 1258 aa22.4■■□□□ 1.18
CLN6-221ENST00000637494 RAVER2Q9HCJ3 691 aaKnown RBP22.4■■□□□ 1.18
CLN6-221ENST00000637494 INCENPQ9NQS7 918 aa22.4■■□□□ 1.18
CLN6-221ENST00000637494 KBTBD13C9JR72 458 aa22.39■■□□□ 1.17
CLN6-221ENST00000637494 DNM1LO00429 736 aa22.39■■□□□ 1.17
CLN6-221ENST00000637494 COL6A1P12109 1028 aa22.39■■□□□ 1.17
CLN6-221ENST00000637494 ZNF792Q3KQV3 632 aa22.39■■□□□ 1.17
CLN6-221ENST00000637494 MFSD6Q6ZSS7 791 aa22.39■■□□□ 1.17
CLN6-221ENST00000637494 ANKRD35Q8N283 1001 aa22.39■■□□□ 1.17
CLN6-221ENST00000637494 CHST13Q8NET6 341 aa22.39■■□□□ 1.17
CLN6-221ENST00000637494 TINF2Q9BSI4 451 aa22.39■■□□□ 1.17
CLN6-221ENST00000637494 RNF41Q9H4P4 317 aaPredicted RBP22.39■■□□□ 1.17
CLN6-221ENST00000637494 IL17RBQ9NRM6 502 aa22.39■■□□□ 1.17
CLN6-221ENST00000637494 CNPY2Q9Y2B0 182 aa22.39■■□□□ 1.17
CLN6-221ENST00000637494 PFASO15067 1338 aa22.38■■□□□ 1.17
CLN6-221ENST00000637494 FGRP09769 529 aa22.38■■□□□ 1.17
CLN6-221ENST00000637494 RCSD1Q6JBY9 416 aa22.38■■□□□ 1.17
CLN6-221ENST00000637494 CWC27Q6UX04 472 aaKnown RBP22.38■■□□□ 1.17
CLN6-221ENST00000637494 SENP6Q9GZR1 1112 aaPredicted RBP22.38■■□□□ 1.17
CLN6-221ENST00000637494 MTMR7Q9Y216 660 aa22.38■■□□□ 1.17
CLN6-221ENST00000637494 FRMPD3Q5JV73 1810 aa22.38■■□□□ 1.17
CLN6-221ENST00000637494 ZNF213O14771 459 aa22.37■■□□□ 1.17
CLN6-221ENST00000637494 NMT2O60551 498 aa22.37■■□□□ 1.17
CLN6-221ENST00000637494 PLA2G6O60733 806 aa22.37■■□□□ 1.17
CLN6-221ENST00000637494 MYCNP04198 464 aaPredicted RBP22.37■■□□□ 1.17
CLN6-221ENST00000637494 HAND2P61296 217 aa22.37■■□□□ 1.17
CLN6-221ENST00000637494 CCDC96Q2M329 555 aa22.37■■□□□ 1.17
CLN6-221ENST00000637494 PRAMEF19Q5SWL8 479 aa22.37■■□□□ 1.17
CLN6-221ENST00000637494 AKNAD1Q5T1N1 836 aa22.37■■□□□ 1.17
CLN6-221ENST00000637494 MSL3Q8N5Y2 521 aaKnown RBP22.37■■□□□ 1.17
CLN6-221ENST00000637494 CHMP4CQ96CF2 233 aa22.37■■□□□ 1.17
CLN6-221ENST00000637494 RBM27Q9P2N5 1060 aaKnown RBP22.37■■□□□ 1.17
CLN6-221ENST00000637494 RIPK3Q9Y572 518 aa22.37■■□□□ 1.17
CLN6-221ENST00000637494 ZNFX1Q9P2E3 1918 aaKnown RBP22.37■■□□□ 1.17
CLN6-221ENST00000637494 RARBP10826 455 aa22.36■■□□□ 1.17
CLN6-221ENST00000637494 ANO1Q5XXA6 986 aa22.36■■□□□ 1.17
CLN6-221ENST00000637494 KCTD1Q719H9 257 aa22.36■■□□□ 1.17
CLN6-221ENST00000637494 DCAF4Q8WV16 495 aa22.36■■□□□ 1.17
CLN6-221ENST00000637494 TCP11L1Q9NUJ3 509 aa22.36■■□□□ 1.17
CLN6-221ENST00000637494 ZMYND8Q9ULU4 1186 aaPredicted RBP22.36■■□□□ 1.17
CLN6-221ENST00000637494 A0A1W2PPC1 479 aa22.35■■□□□ 1.17
CLN6-221ENST00000637494 TOP1P11387 765 aaKnown RBP22.35■■□□□ 1.17
CLN6-221ENST00000637494 NT5C2P49902 561 aa22.35■■□□□ 1.17
CLN6-221ENST00000637494 TKFCQ3LXA3 575 aa22.35■■□□□ 1.17
CLN6-221ENST00000637494 GJC2Q5T442 439 aaPredicted RBP22.35■■□□□ 1.17
CLN6-221ENST00000637494 ESR2Q92731 530 aa22.35■■□□□ 1.17
CLN6-221ENST00000637494 ACAD9Q9H845 621 aa22.35■■□□□ 1.17
CLN6-221ENST00000637494 HOMER2Q9NSB8 354 aa22.35■■□□□ 1.17
CLN6-221ENST00000637494 PLXNA1Q9UIW2 1896 aa22.34■■□□□ 1.17
CLN6-221ENST00000637494 SYNGAP1Q96PV0 1343 aa22.34■■□□□ 1.17
CLN6-221ENST00000637494 ALPK3Q96L96 1907 aa22.34■■□□□ 1.17
CLN6-221ENST00000637494 FXR1P51114 621 aaKnown RBP eCLIP22.34■■□□□ 1.17
CLN6-221ENST00000637494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.34■■□□□ 1.17
CLN6-221ENST00000637494 TACC3Q9Y6A5 838 aa22.34■■□□□ 1.17
CLN6-221ENST00000637494 AKR1A1P14550 325 aa22.33■■□□□ 1.17
CLN6-221ENST00000637494 NOVP48745 357 aa22.33■■□□□ 1.17
CLN6-221ENST00000637494 IRX6P78412 446 aaPredicted RBP22.33■■□□□ 1.17
CLN6-221ENST00000637494 LRRC26Q2I0M4 334 aa22.33■■□□□ 1.17
CLN6-221ENST00000637494 ZNF467Q7Z7K2 595 aaPredicted RBP22.33■■□□□ 1.17
CLN6-221ENST00000637494 TTC14Q96N46 770 aa22.33■■□□□ 1.17
CLN6-221ENST00000637494 XPNPEP3Q9NQH7 507 aa22.33■■□□□ 1.17
CLN6-221ENST00000637494 CTNNA3Q9UI47 895 aa22.33■■□□□ 1.17
CLN6-221ENST00000637494 DNAJC25-GNG10A0A024R161 153 aa22.32■■□□□ 1.16
CLN6-221ENST00000637494 SYN1P17600 705 aa22.32■■□□□ 1.16
CLN6-221ENST00000637494 CCDC178Q5BJE1 867 aa22.32■■□□□ 1.16
CLN6-221ENST00000637494 RNF180Q86T96 592 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms