RNA–Protein interactions for RNA: ENST00000636690.1

GABRB3-221, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-221ENST00000636690 DHX58Q96C10 678 aa7.96□□□□□ -1.14
GABRB3-221ENST00000636690 RRP36Q96EU6 259 aaKnown RBP7.96□□□□□ -1.14
GABRB3-221ENST00000636690 EYA3Q99504 573 aa7.96□□□□□ -1.14
GABRB3-221ENST00000636690 TMEM47Q9BQJ4 181 aa7.96□□□□□ -1.14
GABRB3-221ENST00000636690 CCDC94Q9BW85 323 aaPredicted RBP7.96□□□□□ -1.14
GABRB3-221ENST00000636690 EHD4Q9H223 541 aa7.96□□□□□ -1.14
GABRB3-221ENST00000636690 RIOX1Q9H6W3 641 aa7.96□□□□□ -1.14
GABRB3-221ENST00000636690 DISC1Q9NRI5 854 aa7.96□□□□□ -1.14
GABRB3-221ENST00000636690 ADD3Q9UEY8 706 aaKnown RBP7.96□□□□□ -1.14
GABRB3-221ENST00000636690 SEC63Q9UGP8 760 aaKnown RBP7.96□□□□□ -1.14
GABRB3-221ENST00000636690 LIMA1Q9UHB6 759 aaKnown RBP7.96□□□□□ -1.14
GABRB3-221ENST00000636690 SYNPO2Q9UMS6 1093 aa7.96□□□□□ -1.14
GABRB3-221ENST00000636690 ATP6V0A2Q9Y487 856 aa7.96□□□□□ -1.14
GABRB3-221ENST00000636690 RGPD3A6NKT7 1758 aaPredicted RBP7.96□□□□□ -1.14
GABRB3-221ENST00000636690 RGPD4Q7Z3J3 1758 aa7.96□□□□□ -1.14
GABRB3-221ENST00000636690 A0A087WWV3 80 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 IGKV6D-41A0A0C4DH26 115 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 VWA3AA6NCI4 1184 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 WTIPA6NIX2 430 aaPredicted RBP7.95□□□□□ -1.14
GABRB3-221ENST00000636690 PPP1R3GB7ZBB8 358 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 KLRF2D3W0D1 207 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 H7C1D1 291 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 RHOBTB3O94955 611 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 NPR1P16066 1061 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 AMPD3Q01432 767 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 FMR1Q06787 632 aaKnown RBP eCLIP7.95□□□□□ -1.14
GABRB3-221ENST00000636690 PAK1Q13153 545 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 NONOQ15233 471 aaKnown RBP eCLIP7.95□□□□□ -1.14
GABRB3-221ENST00000636690 ZNF174Q15697 407 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 EARS2Q5JPH6 523 aaKnown RBP7.95□□□□□ -1.14
GABRB3-221ENST00000636690 GPATCH4Q5T3I0 446 aaKnown RBP7.95□□□□□ -1.14
GABRB3-221ENST00000636690 SOGA3Q5TF21 947 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 WWC2Q6AWC2 1192 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 CNNM4Q6P4Q7 775 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 HHIPL2Q6UWX4 724 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 AMIGO3Q86WK7 504 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 TMEM139Q8IV31 216 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 EPSTI1Q96J88 318 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 CCDC17Q96LX7 622 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 BAG1Q99933 345 aaPredicted RBP7.95□□□□□ -1.14
GABRB3-221ENST00000636690 RAB34Q9BZG1 259 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 LRRC27Q9C0I9 530 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 LRRC4BQ9NT99 713 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 INTS13Q9NVM9 706 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 KBTBD4Q9NVX7 518 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 STK17AQ9UEE5 414 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 PCDHA6Q9UN73 950 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 PCDHA8Q9Y5H6 950 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 ABCB11O95342 1321 aa7.95□□□□□ -1.14
GABRB3-221ENST00000636690 COL2A1P02458 1487 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-221ENST00000636690 MYH1P12882 1939 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 A0A087X0B3 334 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 A0A1W2PQC6 194 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 BICDL2A1A5D9 508 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 FAM205CA6NFA0 338 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 AKR1B15C9JRZ8 316 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-221ENST00000636690 PPEF1O14829 653 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-221ENST00000636690 PLSCR1O15162 318 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 FOXN1O15353 648 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 CYTH3O43739 400 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 NMT2O60551 498 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 RPN1P04843 607 aaKnown RBP7.94□□□□□ -1.14
GABRB3-221ENST00000636690 OR52Z1P0C646 297 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 GCFC2P16383 781 aaKnown RBP7.94□□□□□ -1.14
GABRB3-221ENST00000636690 EEF1GP26641 437 aaKnown RBP7.94□□□□□ -1.14
GABRB3-221ENST00000636690 MCM7P33993 719 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 PDE6BP35913 854 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 UBA7P41226 1012 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 STAT6P42226 847 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 KCNQ4P56696 695 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 NCBP1Q09161 790 aaKnown RBP7.94□□□□□ -1.14
GABRB3-221ENST00000636690 ARID5BQ14865 1188 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 CCDC93Q567U6 631 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 SPECC1Q5M775 1068 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 USP49Q70CQ1 688 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 APTXQ7Z2E3 356 aaKnown RBP7.94□□□□□ -1.14
GABRB3-221ENST00000636690 NEK8Q86SG6 692 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 PPFIBP1Q86W92 1011 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 FAM114A1Q8IWE2 563 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 ZNF710Q8N1W2 664 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 KCTD17Q8N5Z5 321 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 PDILTQ8N807 584 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 TC2NQ8N9U0 490 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 RETREG2Q8NC44 543 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 FBXW7Q969H0 707 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 DHTKD1Q96HY7 919 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-221ENST00000636690 TMX4Q9H1E5 349 aaPredicted RBP7.94□□□□□ -1.14
GABRB3-221ENST00000636690 DHX36Q9H2U1 1008 aaKnown RBP7.94□□□□□ -1.14
GABRB3-221ENST00000636690 THAP9Q9H5L6 903 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 MYO1AQ9UBC5 1043 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 DNAI1Q9UI46 699 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 STX8Q9UNK0 236 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 STK24Q9Y6E0 443 aa7.94□□□□□ -1.14
GABRB3-221ENST00000636690 GREB1LQ9C091 1923 aaPredicted RBP7.93□□□□□ -1.14
GABRB3-221ENST00000636690 SMIM22K7EJ46 135 aa7.93□□□□□ -1.14
GABRB3-221ENST00000636690 PSMA7O14818 248 aa7.93□□□□□ -1.14
GABRB3-221ENST00000636690 TTLL1O95922 423 aa7.93□□□□□ -1.14
GABRB3-221ENST00000636690 HLA-DOAP06340 250 aa7.93□□□□□ -1.14
GABRB3-221ENST00000636690 CCDC175P0C221 793 aa7.93□□□□□ -1.14
GABRB3-221ENST00000636690 ATP2B1P20020 1258 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms