RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 PROCA1Q8NCQ7 364 aaPredicted RBP9.96□□□□□ -0.82
CDKL5-209ENST00000635828 RAVER2Q9HCJ3 691 aaKnown RBP9.96□□□□□ -0.82
CDKL5-209ENST00000635828 HOMER2Q9NSB8 354 aa9.96□□□□□ -0.82
CDKL5-209ENST00000635828 UNCXA6NJT0 531 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 CTDNEP1O95476 244 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 FANCBQ8NB91 859 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 ZNF536O15090 1300 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 PALM3A6NDB9 673 aaPredicted RBP9.95□□□□□ -0.82
CDKL5-209ENST00000635828 FOXN1O15353 648 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 PLS1Q14651 629 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 SART3Q15020 963 aaKnown RBP9.95□□□□□ -0.82
CDKL5-209ENST00000635828 CATIPQ7Z7H3 387 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 SMCR8Q8TEV9 937 aaPredicted RBP9.95□□□□□ -0.82
CDKL5-209ENST00000635828 GMCL1Q96IK5 515 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 ZBTB43O43298 467 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 JAK2O60674 1132 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 HMGB1P09429 215 aaKnown RBP9.95□□□□□ -0.82
CDKL5-209ENST00000635828 MAP2K2P36507 400 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 STAT2P52630 851 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 USP14P54578 494 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 USH1GQ495M9 461 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 FASTKD5Q7L8L6 764 aaKnown RBP9.95□□□□□ -0.82
CDKL5-209ENST00000635828 ANKRD23Q86SG2 305 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 PIGSQ96S52 555 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 JMJD4Q9H9V9 463 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 WBP1LQ9NX94 342 aa9.95□□□□□ -0.82
CDKL5-209ENST00000635828 RANBP2P49792 3224 aaKnown RBP9.95□□□□□ -0.82
CDKL5-209ENST00000635828 VWA5AO00534 786 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 WDR46O15213 610 aaKnown RBP9.94□□□□□ -0.82
CDKL5-209ENST00000635828 HOXA7P31268 230 aaPredicted RBP9.94□□□□□ -0.82
CDKL5-209ENST00000635828 FOSBP53539 338 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 IRX3P78415 501 aaPredicted RBP9.94□□□□□ -0.82
CDKL5-209ENST00000635828 TBC1D5Q92609 795 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 EFCC1Q9HA90 598 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 USP17L15C9J2P7 530 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 USP17L13C9JLJ4 530 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 USP17L11C9JVI0 530 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 USP17L18D6R9N7 530 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 USP17L22D6RA61 530 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 USP17L17D6RBQ6 530 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 USP17L19D6RCP7 530 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 USP17L20D6RJB6 530 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 PARP1P09874 1014 aaKnown RBP9.94□□□□□ -0.82
CDKL5-209ENST00000635828 USP17L24Q0WX57 530 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 FUT2Q10981 343 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 GRM4Q14833 912 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 CCDC83Q8IWF9 413 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 REPS2Q8NFH8 660 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 LPAR1Q92633 364 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 GPKOWQ92917 476 aaPredicted RBP eCLIP9.94□□□□□ -0.82
CDKL5-209ENST00000635828 GINM1Q9NU53 330 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 PPP1R9AQ9ULJ8 1098 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 ADGRA2Q96PE1 1338 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 GOLGA8AA7E2F4 631 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 DHX16O60231 1041 aaKnown RBP9.94□□□□□ -0.82
CDKL5-209ENST00000635828 DSG3P32926 999 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 METAP2P50579 478 aaKnown RBP eCLIP9.94□□□□□ -0.82
CDKL5-209ENST00000635828 SREBF2Q12772 1141 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 COG2Q14746 738 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 NTRK3Q16288 839 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 TYW1BQ6NUM6 668 aa9.94□□□□□ -0.82
CDKL5-209ENST00000635828 ZNF214Q9UL59 606 aaPredicted RBP9.94□□□□□ -0.82
CDKL5-209ENST00000635828 COA7Q96BR5 231 aa9.93□□□□□ -0.82
CDKL5-209ENST00000635828 SLF1Q9BQI6 1058 aa9.93□□□□□ -0.82
CDKL5-209ENST00000635828 A0A0G2JMZ2 1700 aa9.93□□□□□ -0.82
CDKL5-209ENST00000635828 TLR2O60603 784 aa9.93□□□□□ -0.82
CDKL5-209ENST00000635828 MUM1L1Q5H9M0 696 aa9.93□□□□□ -0.82
CDKL5-209ENST00000635828 DDX11Q96FC9 970 aa9.93□□□□□ -0.82
CDKL5-209ENST00000635828 TBC1D2Q9BYX2 928 aa9.93□□□□□ -0.82
CDKL5-209ENST00000635828 WDR19Q8NEZ3 1342 aa9.93□□□□□ -0.82
CDKL5-209ENST00000635828 HSPA1AP0DMV8 641 aaKnown RBP9.93□□□□□ -0.82
CDKL5-209ENST00000635828 HSPA1BP0DMV9 641 aaKnown RBP9.93□□□□□ -0.82
CDKL5-209ENST00000635828 C17orf99Q6UX52 265 aa9.93□□□□□ -0.82
CDKL5-209ENST00000635828 SH2D4AQ9H788 454 aa9.93□□□□□ -0.82
CDKL5-209ENST00000635828 EVCP57679 992 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 RTN1Q16799 776 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 SYDE2Q5VT97 1194 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 LBX2Q6XYB7 198 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 ZNF296Q8WUU4 475 aaPredicted RBP9.92□□□□□ -0.82
CDKL5-209ENST00000635828 DCAF4Q8WV16 495 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 V9GY48 417 aaPredicted RBP9.92□□□□□ -0.82
CDKL5-209ENST00000635828 CNTNAP5Q8WYK1 1306 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 RBAK-RBAKDNI3L0D1 243 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 CA12O43570 354 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 CDC37Q16543 378 aaPredicted RBP9.92□□□□□ -0.82
CDKL5-209ENST00000635828 QRICH1Q2TAL8 776 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 TMTC3Q6ZXV5 915 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 TMX3Q96JJ7 454 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 ADAMTS5Q9UNA0 930 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 LBX1P52954 281 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 RABEP1Q15276 862 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 OTUD7BQ6GQQ9 843 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 FBXL16Q8N461 479 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 PRPF38AQ8NAV1 312 aaKnown RBP9.92□□□□□ -0.82
CDKL5-209ENST00000635828 ZFP91Q96JP5 570 aaPredicted RBP9.92□□□□□ -0.82
CDKL5-209ENST00000635828 SLC38A10Q9HBR0 1119 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 TSHZ2Q9NRE2 1034 aa9.92□□□□□ -0.82
CDKL5-209ENST00000635828 NFIBO00712 420 aa9.91□□□□□ -0.82
CDKL5-209ENST00000635828 OPLAHO14841 1288 aa9.91□□□□□ -0.82
CDKL5-209ENST00000635828 BCRP11274 1271 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms