RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 MBD5Q9P267 1494 aa23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 PRDM15P57071 1507 aaPredicted RBP23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 FMNL1O95466 1100 aaPredicted RBP23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 PDIA3P30101 505 aaKnown RBP23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 CCDC89Q8N998 374 aa23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 COL4A3BPQ9Y5P4 624 aa23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 DCAF15Q66K64 600 aa23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 SPATS2Q86XZ4 545 aaKnown RBP23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 ZYXQ15942 572 aaKnown RBP23.18■■□□□ 1.3
SMARCA2-227ENST00000634760 NR1I2O75469 434 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 CHRNDQ07001 517 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 ZBTB8OSQ8IWT0 167 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 LMNTD2Q8IXW0 634 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 AK8Q96MA6 479 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 USP21Q9UK80 565 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 PHBP35232 272 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 ARHGEF16Q5VV41 709 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 NSMFQ6X4W1 530 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 RAB20Q9NX57 234 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 BBOF1Q8ND07 529 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 PCDHA12Q9UN75 941 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 LEMD3Q9Y2U8 911 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 EFCAB8A8MWE9 144 aa23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 FAM207AQ9NSI2 230 aaPredicted RBP23.17■■□□□ 1.3
SMARCA2-227ENST00000634760 PSDA5PKW4 1024 aaPredicted RBP23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 TCP1P17987 556 aaKnown RBP23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 IRX3P78415 501 aaPredicted RBP23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 APBA1Q02410 837 aa23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 FBXO11Q86XK2 927 aa23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 SOS2Q07890 1332 aaPredicted RBP23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 FGAP02671 866 aa23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 MYL1P05976 194 aa23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 SARNPP82979 210 aaKnown RBP23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 U2AF1L4Q8WU68 220 aaKnown RBP23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 USTQ9Y2C2 406 aa23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 PPP2R2CQ9Y2T4 447 aa23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 BZW2Q9Y6E2 419 aaKnown RBP23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 ASPRV1Q53RT3 343 aa23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 PCDHA7Q9UN72 937 aa23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 PPIP5K2O43314 1243 aa23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 ATF7P17544 494 aaPredicted RBP23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 ABCD1P33897 745 aa23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 GTF2IP78347 998 aa23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 TCP10Q12799 353 aa23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 MAEAQ7L5Y9 396 aa23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 RNF26Q9BY78 433 aaPredicted RBP23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 ARMCX3Q9UH62 379 aaPredicted RBP23.16■■□□□ 1.3
SMARCA2-227ENST00000634760 BTDP43251 543 aa23.15■■□□□ 1.3
SMARCA2-227ENST00000634760 BCAP29Q9UHQ4 241 aa23.15■■□□□ 1.3
SMARCA2-227ENST00000634760 TNNI1P19237 187 aa23.15■■□□□ 1.3
SMARCA2-227ENST00000634760 TECP42680 631 aa23.15■■□□□ 1.3
SMARCA2-227ENST00000634760 HADHQ16836 314 aaKnown RBP23.15■■□□□ 1.3
SMARCA2-227ENST00000634760 GKAP1Q5VSY0 366 aaPredicted RBP23.15■■□□□ 1.3
SMARCA2-227ENST00000634760 SND1Q7KZF4 910 aaKnown RBP eCLIP23.15■■□□□ 1.3
SMARCA2-227ENST00000634760 KLRF2D3W0D1 207 aa23.15■■□□□ 1.3
SMARCA2-227ENST00000634760 RNASE9P60153 205 aaKnown RBP23.15■■□□□ 1.3
SMARCA2-227ENST00000634760 TYW1Q9NV66 732 aaKnown RBP23.15■■□□□ 1.3
SMARCA2-227ENST00000634760 PDE8BO95263 885 aa23.15■■□□□ 1.3
SMARCA2-227ENST00000634760 OAS2P29728 719 aaKnown RBP23.15■■□□□ 1.3
SMARCA2-227ENST00000634760 PABPC4Q13310 644 aaKnown RBP eCLIP23.15■■□□□ 1.3
SMARCA2-227ENST00000634760 TNNC2P02585 160 aa23.14■■□□□ 1.3
SMARCA2-227ENST00000634760 USP6P35125 1406 aa23.14■■□□□ 1.3
SMARCA2-227ENST00000634760 HAUS1Q96CS2 278 aa23.14■■□□□ 1.3
SMARCA2-227ENST00000634760 CCDC17Q96LX7 622 aa23.14■■□□□ 1.3
SMARCA2-227ENST00000634760 RRAGDQ9NQL2 400 aaPredicted RBP23.14■■□□□ 1.3
SMARCA2-227ENST00000634760 IL6STP40189 918 aaPredicted RBP23.14■■□□□ 1.3
SMARCA2-227ENST00000634760 CERKLQ49MI3 558 aaPredicted RBP23.14■■□□□ 1.3
SMARCA2-227ENST00000634760 FAM102BQ5T8I3 360 aa23.14■■□□□ 1.3
SMARCA2-227ENST00000634760 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.14■■□□□ 1.34e-6■■■■□ 24.4
SMARCA2-227ENST00000634760 ATP2A3Q93084 1043 aa23.14■■□□□ 1.3
SMARCA2-227ENST00000634760 GSDMAQ96QA5 445 aa23.14■■□□□ 1.3
SMARCA2-227ENST00000634760 ZMYND15Q9H091 742 aa23.14■■□□□ 1.3
SMARCA2-227ENST00000634760 PDE6CP51160 858 aa23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 PPP1R2P3Q6NXS1 205 aa23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 CPXCR1Q8N123 301 aa23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 MYO1AQ9UBC5 1043 aa23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 XDHP47989 1333 aa23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 ANKARQ7Z5J8 1434 aa23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 LRRC8AQ8IWT6 810 aa23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 VCX3BQ9H321 246 aa23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 POLR3EQ9NVU0 708 aa23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 GIPC1O14908 333 aa23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 KCNQ3O43525 872 aa23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 CD19P15391 556 aa23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 CNGA1P29973 690 aa23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 ADKP55263 362 aaKnown RBP23.14■■□□□ 1.29
SMARCA2-227ENST00000634760 KRT19P08727 400 aa23.13■■□□□ 1.29
SMARCA2-227ENST00000634760 SCRN1Q12765 414 aa23.13■■□□□ 1.29
SMARCA2-227ENST00000634760 AOC3Q16853 763 aa23.13■■□□□ 1.29
SMARCA2-227ENST00000634760 GEN1Q17RS7 908 aa23.13■■□□□ 1.29
SMARCA2-227ENST00000634760 TTLL7Q6ZT98 887 aa23.13■■□□□ 1.29
SMARCA2-227ENST00000634760 FAM81BQ96LP2 452 aa23.13■■□□□ 1.29
SMARCA2-227ENST00000634760 PCDHA4Q9UN74 947 aa23.13■■□□□ 1.29
SMARCA2-227ENST00000634760 RABGAP1Q9Y3P9 1069 aa23.13■■□□□ 1.29
SMARCA2-227ENST00000634760 HECW2Q9P2P5 1572 aa23.13■■□□□ 1.29
SMARCA2-227ENST00000634760 TARBP1Q13395 1621 aaKnown RBP23.13■■□□□ 1.29
SMARCA2-227ENST00000634760 HSPA1LP34931 641 aa23.13■■□□□ 1.29
SMARCA2-227ENST00000634760 RASSF2P50749 326 aa23.13■■□□□ 1.29
SMARCA2-227ENST00000634760 BCAMP50895 628 aa23.13■■□□□ 1.29
SMARCA2-227ENST00000634760 TRIM31Q9BZY9 425 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms