RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 hCG_2014768A0A024R1R8 64 aa8.17□□□□□ -1.1
BRCA1-230ENST00000634433 UBE2Q2LH0YL09 131 aa8.17□□□□□ -1.1
BRCA1-230ENST00000634433 SMARCA1P28370 1054 aa8.17□□□□□ -1.1
BRCA1-230ENST00000634433 PRELPP51888 382 aa8.17□□□□□ -1.1
BRCA1-230ENST00000634433 TPM4P67936 248 aa8.17□□□□□ -1.1
BRCA1-230ENST00000634433 GLIPR1L2Q4G1C9 344 aa8.17□□□□□ -1.1
BRCA1-230ENST00000634433 KANK3Q6NY19 840 aa8.17□□□□□ -1.1
BRCA1-230ENST00000634433 TSHZ1Q6ZSZ6 1077 aa8.17□□□□□ -1.1
BRCA1-230ENST00000634433 SUPT20HQ8NEM7 779 aa8.17□□□□□ -1.1
BRCA1-230ENST00000634433 TEKT1Q969V4 418 aa8.17□□□□□ -1.1
BRCA1-230ENST00000634433 SWAP70Q9UH65 585 aa8.17□□□□□ -1.1
BRCA1-230ENST00000634433 LTBP1Q14766 1721 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 ANKRD31Q8N7Z5 1873 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 TOP1P11387 765 aaKnown RBP8.16□□□□□ -1.1
BRCA1-230ENST00000634433 BDNFP23560 247 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 TOB1P50616 345 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-230ENST00000634433 HDLBPQ00341 1268 aaKnown RBP8.16□□□□□ -1.1
BRCA1-230ENST00000634433 EVX2Q03828 476 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 KIAA2012Q0VF49 1180 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 NR5A1Q13285 461 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 DOK7Q18PE1 504 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 SHC4Q6S5L8 630 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-230ENST00000634433 LUZP1Q86V48 1076 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 CCDC148Q8NFR7 591 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 FERMT2Q96AC1 680 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 BPIFA3Q9BQP9 254 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 ARFGEF1Q9Y6D6 1849 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 NAV1Q8NEY1 1877 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 MYO3BQ8WXR4 1341 aa8.16□□□□□ -1.1
BRCA1-230ENST00000634433 USP17L3A6NCW0 530 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 USP17L4A6NCW7 530 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 SMTNL1A8MU46 457 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 HLA-DOAP06340 250 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 YBX3P16989 372 aaKnown RBP eCLIP8.15□□□□□ -1.1
BRCA1-230ENST00000634433 NLRP12P59046 1061 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 PTPROQ16827 1216 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 SLC4A8Q2Y0W8 1093 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 STRIP1Q5VSL9 837 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 MSL1Q68DK7 614 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 USP17L1Q7RTZ2 530 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 CCDC12Q8WUD4 166 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-230ENST00000634433 PCMTD1Q96MG8 357 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-230ENST00000634433 TMEM47Q9BQJ4 181 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 USP40Q9NVE5 1235 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 KCNH3Q9ULD8 1083 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 STX8Q9UNK0 236 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 MYH6P13533 1939 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 FSTL1Q12841 308 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 IQCB1Q15051 598 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 CNNM3Q8NE01 707 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 OXER1Q8TDS5 423 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 PYM1Q9BRP8 204 aaKnown RBP8.15□□□□□ -1.1
BRCA1-230ENST00000634433 TRIM5Q9C035 493 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 METTL14Q9HCE5 456 aaKnown RBP8.15□□□□□ -1.1
BRCA1-230ENST00000634433 MAD2L2Q9UI95 211 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 FBXO2Q9UK22 296 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-230ENST00000634433 ECM29Q5VYK3 1845 aa8.15□□□□□ -1.1
BRCA1-230ENST00000634433 PALM3A6NDB9 673 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-230ENST00000634433 ZNF500O60304 480 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-230ENST00000634433 TOMM70O94826 608 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 PARP1P09874 1014 aaKnown RBP8.14□□□□□ -1.11
BRCA1-230ENST00000634433 NOVP48745 357 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 TTLL12Q14166 644 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-230ENST00000634433 CCDC144BQ3MJ40 725 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 SARM1Q6SZW1 724 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 CLIC6Q96NY7 704 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 SPZ1Q9BXG8 430 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 VRTNQ9H8Y1 702 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 PCDHB6Q9Y5E3 794 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 hCG_1642624A0A1W2PR95 340 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 F8W031 263 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-230ENST00000634433 KIF3CO14782 793 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 ATP2B1P20020 1258 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 CDC25BP30305 580 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 TSNAXIP1Q2TAA8 658 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 TTC38Q5R3I4 469 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 BLIDQ8IZY5 108 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 CERS5Q8N5B7 392 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 DNAJC5GQ8N7S2 189 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 SLC44A5Q8NCS7 719 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 NLGN2Q8NFZ4 835 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 TNFRSF25Q93038 417 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 ZDHHC15Q96MV8 337 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 DHX36Q9H2U1 1008 aaKnown RBP8.14□□□□□ -1.11
BRCA1-230ENST00000634433 TUBE1Q9UJT0 475 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 PCDHA4Q9UN74 947 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 PLIN4Q96Q06 1357 aa8.14□□□□□ -1.11
BRCA1-230ENST00000634433 KLRF2D3W0D1 207 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 hCG_1984214I3L0E3 225 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 CRKP46108 304 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 ZNF75DP51815 510 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 GYS2P54840 703 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 GABPAQ06546 454 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 PICALMQ13492 652 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 CCDC181Q5TID7 509 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 OLFM4Q6UX06 510 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 PLA2G4DQ86XP0 818 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 DRC7Q8IY82 874 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 ZNF713Q8N859 430 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms