RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 RAI14Q9P0K7 980 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 PCDHB3Q9Y5E6 796 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 TLL1O43897 1013 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 GNRH1P01148 92 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 PTPRAP18433 802 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 FGFR2P21802 821 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 SCTRP47872 440 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 HMGCS2P54868 508 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 RASGRF1Q13972 1273 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 WDR78Q5VTH9 848 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 FASTKD5Q7L8L6 764 aaKnown RBP5.86□□□□□ -1.47
LINC00550-201ENST00000629293 ATG9AQ7Z3C6 839 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 GLYCTKQ8IVS8 523 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 C7orf61Q8IZ16 206 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 SCYL3Q8IZE3 742 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 DIS3LQ8TF46 1054 aaKnown RBP5.86□□□□□ -1.47
LINC00550-201ENST00000629293 ZNF592Q92610 1267 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 COA7Q96BR5 231 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 SPSB2Q99619 263 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 CWC22Q9HCG8 908 aaKnown RBP5.86□□□□□ -1.47
LINC00550-201ENST00000629293 DEKP35659 375 aaKnown RBP5.85□□□□□ -1.47
LINC00550-201ENST00000629293 PRMT2P55345 433 aa5.85□□□□□ -1.47
LINC00550-201ENST00000629293 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.85□□□□□ -1.47
LINC00550-201ENST00000629293 DDX4Q9NQI0 724 aaKnown RBP5.85□□□□□ -1.47
LINC00550-201ENST00000629293 DENND2AQ9ULE3 1009 aa5.85□□□□□ -1.47
LINC00550-201ENST00000629293 KCNH4Q9UQ05 1017 aa5.85□□□□□ -1.47
LINC00550-201ENST00000629293 SUGT1Q9Y2Z0 365 aa5.85□□□□□ -1.47
LINC00550-201ENST00000629293 OTOFQ9HC10 1997 aa5.85□□□□□ -1.47
LINC00550-201ENST00000629293 DLL1O00548 723 aa5.85□□□□□ -1.47
LINC00550-201ENST00000629293 CXCL11O14625 94 aa5.85□□□□□ -1.47
LINC00550-201ENST00000629293 SGPL1O95470 568 aa5.85□□□□□ -1.47
LINC00550-201ENST00000629293 TREML2Q5T2D2 321 aa5.85□□□□□ -1.47
LINC00550-201ENST00000629293 GPAT2Q6NUI2 795 aa5.85□□□□□ -1.47
LINC00550-201ENST00000629293 MKNK1Q9BUB5 465 aa5.85□□□□□ -1.47
LINC00550-201ENST00000629293 SRGAP3O43295 1099 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 BCRP11274 1271 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 TRIM27P14373 513 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 CYP2B6P20813 491 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 NAALADL2Q58DX5 795 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 TRMT44Q8IYL2 757 aaKnown RBP5.84□□□□□ -1.47
LINC00550-201ENST00000629293 MEIS3Q99687 375 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 PAGR1Q9BTK6 254 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 ZCCHC17Q9NP64 241 aaKnown RBP5.84□□□□□ -1.47
LINC00550-201ENST00000629293 ZNF358Q9NW07 568 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 NOB1Q9ULX3 412 aaKnown RBP5.84□□□□□ -1.47
LINC00550-201ENST00000629293 ZNF646O15015 1829 aaPredicted RBP5.84□□□□□ -1.47
LINC00550-201ENST00000629293 PTPRCP08575 1304 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 TNFRSF10BO14763 440 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 IL15P40933 162 aaPredicted RBP5.84□□□□□ -1.47
LINC00550-201ENST00000629293 RFX5P48382 616 aaPredicted RBP5.84□□□□□ -1.47
LINC00550-201ENST00000629293 TFCP2Q12800 502 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 TRIM32Q13049 653 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 ZYXQ15942 572 aaKnown RBP5.84□□□□□ -1.47
LINC00550-201ENST00000629293 Q7L0L9 218 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 MRIQ9BWK5 157 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 SAP130Q9H0E3 1048 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 LRP2BPQ9P2M1 347 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 UTYO14607 1347 aa5.84□□□□□ -1.47
LINC00550-201ENST00000629293 A0A1B0GUL7 405 aa5.84□□□□□ -1.48
LINC00550-201ENST00000629293 SOX1O00570 391 aaPredicted RBP5.84□□□□□ -1.48
LINC00550-201ENST00000629293 FZD6O60353 706 aa5.84□□□□□ -1.48
LINC00550-201ENST00000629293 STAU1O95793 577 aaKnown RBP5.84□□□□□ -1.48
LINC00550-201ENST00000629293 IRX3P78415 501 aaPredicted RBP5.84□□□□□ -1.48
LINC00550-201ENST00000629293 MECOMQ03112 1051 aa5.84□□□□□ -1.48
LINC00550-201ENST00000629293 OS9Q13438 667 aaPredicted RBP5.84□□□□□ -1.48
LINC00550-201ENST00000629293 HDAC1Q13547 482 aaPredicted RBP5.84□□□□□ -1.48
LINC00550-201ENST00000629293 MOGSQ13724 837 aa5.84□□□□□ -1.48
LINC00550-201ENST00000629293 ALDH1L2Q3SY69 923 aa5.84□□□□□ -1.48
LINC00550-201ENST00000629293 ATF7IPQ6VMQ6 1270 aa5.84□□□□□ -1.48
LINC00550-201ENST00000629293 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.84□□□□□ -1.48
LINC00550-201ENST00000629293 TINF2Q9BSI4 451 aa5.84□□□□□ -1.48
LINC00550-201ENST00000629293 TSR3Q9UJK0 312 aaKnown RBP5.84□□□□□ -1.48
LINC00550-201ENST00000629293 ZNF112Q9UJU3 913 aa5.84□□□□□ -1.48
LINC00550-201ENST00000629293 KIF16BQ96L93 1317 aa5.84□□□□□ -1.48
LINC00550-201ENST00000629293 A0A0G2JLL6 359 aaPredicted RBP5.83□□□□□ -1.48
LINC00550-201ENST00000629293 ST18O60284 1047 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 NECAB2Q7Z6G3 386 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 PRRT2Q7Z6L0 340 aaPredicted RBP5.83□□□□□ -1.48
LINC00550-201ENST00000629293 TEX11Q8IYF3 940 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 ZGPATQ8N5A5 531 aaKnown RBP5.83□□□□□ -1.48
LINC00550-201ENST00000629293 XAGE2Q96GT9 111 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 FAM161BQ96MY7 647 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 NOL10Q9BSC4 688 aaKnown RBP5.83□□□□□ -1.48
LINC00550-201ENST00000629293 RWDD1Q9H446 243 aaPredicted RBP5.83□□□□□ -1.48
LINC00550-201ENST00000629293 AFG3L2Q9Y4W6 797 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 CACNA1FO60840 1977 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 PHF20L1A8MW92 1017 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 CTNND1O60716 968 aaKnown RBP5.83□□□□□ -1.48
LINC00550-201ENST00000629293 GDF11O95390 407 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 SPTY2D1Q68D10 685 aaPredicted RBP5.83□□□□□ -1.48
LINC00550-201ENST00000629293 MAPKAPK5Q8IW41 473 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 CRACR2BQ8N4Y2 399 aaPredicted RBP5.83□□□□□ -1.48
LINC00550-201ENST00000629293 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.83□□□□□ -1.48
LINC00550-201ENST00000629293 CDH23Q9H251 3354 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 ENTPD3O75355 529 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 NOL9Q5SY16 702 aaKnown RBP5.83□□□□□ -1.48
LINC00550-201ENST00000629293 BAP1Q92560 729 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 AATFQ9NY61 560 aaKnown RBP eCLIP5.83□□□□□ -1.48
LINC00550-201ENST00000629293 SAP30BPQ9UHR5 308 aaKnown RBP5.83□□□□□ -1.48
LINC00550-201ENST00000629293 DDX19BQ9UMR2 479 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms