RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 FDPSP14324 419 aaKnown RBP11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 PTPRAP18433 802 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 GUCY1A2P33402 732 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 MRPL12P52815 198 aaKnown RBP11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 NAPAP54920 295 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 PPATQ06203 517 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 RILPL1Q5EBL4 403 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 BTNL9Q6UXG8 535 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 HEATR3Q7Z4Q2 680 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 ERO1BQ86YB8 467 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 SAMD3Q8N6K7 520 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 NKX2-3Q8TAU0 364 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 NAP1L4Q99733 375 aaKnown RBP11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 AMNQ9BXJ7 453 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 BARHL2Q9NY43 387 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 FRMPD2Q68DX3 1309 aaPredicted RBP11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 POLR2AP24928 1970 aaKnown RBP11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 TMEM232C9JQI7 657 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 CXCL11O14625 94 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 MBD3O95983 291 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 GOLGA8HP0CJ92 632 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 MCM4P33991 863 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 TRAPPC10P48553 1259 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 BACE1P56817 501 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 FUT2Q10981 343 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 SYDE2Q5VT97 1194 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 HOMER1Q86YM7 354 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 STAG2Q8N3U4 1231 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 PRPF38AQ8NAV1 312 aaKnown RBP11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 CUL5Q93034 780 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 SYAP1Q96A49 352 aaPredicted RBP11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 C12orf42Q96LP6 360 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 MAF1Q9H063 256 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 EHMT1Q9H9B1 1298 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 RRAGCQ9HB90 399 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 ZHX2Q9Y6X8 837 aa11.65□□□□□ -0.54
FOXCUT-201ENST00000628509 MYPNQ86TC9 1320 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 CCDC194A0A1B0GVG4 234 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 ADM5C9JUS6 153 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 ZBED4O75132 1171 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 USP2O75604 605 aaPredicted RBP11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 U2AF2P26368 475 aaKnown RBP eCLIP11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 INPP5BP32019 993 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 SF3A1Q15459 793 aaKnown RBP11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 NFKBIBQ15653 356 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 KCTD1Q719H9 257 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 FASTKD5Q7L8L6 764 aaKnown RBP11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 KRT25Q7Z3Z0 450 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 FBXO11Q86XK2 927 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 NOSTRINQ8IVI9 506 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 DIS3L2Q8IYB7 885 aaKnown RBP11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 ADGRF4Q8IZF3 695 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 DAGLBQ8NCG7 672 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 GTF3C2Q8WUA4 911 aaPredicted RBP11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 PHF20Q9BVI0 1012 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 VAT1LQ9HCJ6 419 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 PCDHA4Q9UN74 947 aa11.64□□□□□ -0.55
FOXCUT-201ENST00000628509 YEATS4O95619 227 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 ADCY7P51828 1080 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 GUCY1B3Q02153 619 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 KIF23Q02241 960 aaPredicted RBP11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 SPP2Q13103 211 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 ORC2Q13416 577 aaPredicted RBP11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 MTMR2Q13614 643 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 PKN1Q16512 942 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 CDC37Q16543 378 aaPredicted RBP11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 FOXD4L5Q5VV16 416 aaPredicted RBP11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 BLIDQ8IZY5 108 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 CMTR1Q8N1G2 835 aaKnown RBP11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 PROCA1Q8NCQ7 364 aaPredicted RBP11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 KCNG4Q8TDN1 519 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 FOXD4L4Q8WXT5 416 aaPredicted RBP11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 SLC10A4Q96EP9 437 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 CCDC34Q96HJ3 373 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 SPATA32Q96LK8 384 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 SLF1Q9BQI6 1058 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 TANGO6Q9C0B7 1094 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 UBA5Q9GZZ9 404 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 ZMYND12Q9H0C1 365 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 JMJD4Q9H9V9 463 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 HOXC10Q9NYD6 342 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 MAP3K20Q9NYL2 800 aaKnown RBP11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 VPS54Q9P1Q0 977 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 MRPL11Q9Y3B7 192 aaKnown RBP11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 PAPPA2Q9BXP8 1791 aa11.63□□□□□ -0.55
FOXCUT-201ENST00000628509 ELP1O95163 1332 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 A0A1W2PRG0 241 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 SMCO2A6NFE2 343 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 SPDYE5A6NIY4 337 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 USP17L15C9J2P7 530 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 USP17L13C9JLJ4 530 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 USP17L11C9JVI0 530 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 USP17L18D6R9N7 530 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 USP17L22D6RA61 530 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 USP17L17D6RBQ6 530 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 USP17L19D6RCP7 530 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 USP17L20D6RJB6 530 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 FOSP01100 380 aaPredicted RBP11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 ECE1P42892 770 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 FOSBP53539 338 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms