RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 COL9A3Q14050 684 aaPredicted RBP17.23■□□□□ 0.35
PNKP-221ENST00000627317 SEC23AQ15436 765 aa17.23■□□□□ 0.35
PNKP-221ENST00000627317 MORN1Q5T089 497 aa17.23■□□□□ 0.35
PNKP-221ENST00000627317 SLFN13Q68D06 897 aa17.23■□□□□ 0.35
PNKP-221ENST00000627317 PNMA1Q8ND90 353 aa17.23■□□□□ 0.35
PNKP-221ENST00000627317 ANKS1AQ92625 1134 aa17.23■□□□□ 0.35
PNKP-221ENST00000627317 LRRC2Q9BYS8 371 aa17.23■□□□□ 0.35
PNKP-221ENST00000627317 BACH2Q9BYV9 841 aa17.23■□□□□ 0.35
PNKP-221ENST00000627317 C22orf23Q9BZE7 217 aa17.23■□□□□ 0.35
PNKP-221ENST00000627317 SH2B2O14492 632 aaPredicted RBP17.22■□□□□ 0.35
PNKP-221ENST00000627317 MYCP01106 439 aaPredicted RBP17.22■□□□□ 0.35
PNKP-221ENST00000627317 INHAP05111 366 aa17.22■□□□□ 0.35
PNKP-221ENST00000627317 CCL5P13501 91 aa17.22■□□□□ 0.35
PNKP-221ENST00000627317 CPA1P15085 419 aa17.22■□□□□ 0.35
PNKP-221ENST00000627317 COG2Q14746 738 aa17.22■□□□□ 0.35
PNKP-221ENST00000627317 CCDC96Q2M329 555 aa17.22■□□□□ 0.35
PNKP-221ENST00000627317 GPR142Q7Z601 462 aa17.22■□□□□ 0.35
PNKP-221ENST00000627317 SOCS4Q8WXH5 440 aa17.22■□□□□ 0.35
PNKP-221ENST00000627317 TCEANC2Q96MN5 208 aa17.22■□□□□ 0.35
PNKP-221ENST00000627317 TMEM106CQ9BVX2 250 aa17.22■□□□□ 0.35
PNKP-221ENST00000627317 TM6SF1Q9BZW5 370 aa17.22■□□□□ 0.35
PNKP-221ENST00000627317 ADAMTS5Q9UNA0 930 aa17.22■□□□□ 0.35
PNKP-221ENST00000627317 CYP46A1Q9Y6A2 500 aa17.22■□□□□ 0.35
PNKP-221ENST00000627317 PARP14Q460N5 1801 aa17.21■□□□□ 0.35
PNKP-221ENST00000627317 XRCC5P13010 732 aaKnown RBP17.21■□□□□ 0.35
PNKP-221ENST00000627317 RPS6KB1P23443 525 aa17.21■□□□□ 0.35
PNKP-221ENST00000627317 SLC1A4P43007 532 aa17.21■□□□□ 0.35
PNKP-221ENST00000627317 FAM83BQ5T0W9 1011 aa17.21■□□□□ 0.35
PNKP-221ENST00000627317 NFXL1Q6ZNB6 911 aa17.21■□□□□ 0.35
PNKP-221ENST00000627317 IGDCC4Q8TDY8 1250 aa17.21■□□□□ 0.35
PNKP-221ENST00000627317 DCAF4Q8WV16 495 aa17.21■□□□□ 0.35
PNKP-221ENST00000627317 CHMP4CQ96CF2 233 aa17.21■□□□□ 0.35
PNKP-221ENST00000627317 GMCL1Q96IK5 515 aa17.21■□□□□ 0.35
PNKP-221ENST00000627317 NUP88Q99567 741 aaPredicted RBP17.21■□□□□ 0.35
PNKP-221ENST00000627317 UPF3BQ9BZI7 483 aaKnown RBP17.21■□□□□ 0.35
PNKP-221ENST00000627317 UNC93B1Q9H1C4 597 aa17.21■□□□□ 0.35
PNKP-221ENST00000627317 LY9Q9HBG7 655 aa17.21■□□□□ 0.35
PNKP-221ENST00000627317 CCDC69A6NI79 296 aa17.2■□□□□ 0.34
PNKP-221ENST00000627317 GJB1P08034 283 aa17.2■□□□□ 0.34
PNKP-221ENST00000627317 DSG3P32926 999 aa17.2■□□□□ 0.34
PNKP-221ENST00000627317 EXOSC10Q01780 885 aaKnown RBP17.2■□□□□ 0.34
PNKP-221ENST00000627317 RUFY3Q7L099 469 aa17.2■□□□□ 0.34
PNKP-221ENST00000627317 PLEKHH3Q7Z736 793 aa17.2■□□□□ 0.34
PNKP-221ENST00000627317 UBE2Q1Q7Z7E8 422 aa17.2■□□□□ 0.34
PNKP-221ENST00000627317 TRIB2Q92519 343 aa17.2■□□□□ 0.34
PNKP-221ENST00000627317 ATG4CQ96DT6 458 aa17.2■□□□□ 0.34
PNKP-221ENST00000627317 ZSWIM6Q9HCJ5 1215 aa17.2■□□□□ 0.34
PNKP-221ENST00000627317 PAK6Q9NQU5 681 aaPredicted RBP17.2■□□□□ 0.34
PNKP-221ENST00000627317 GPHNQ9NQX3 736 aaPredicted RBP17.2■□□□□ 0.34
PNKP-221ENST00000627317 HOXC10Q9NYD6 342 aa17.2■□□□□ 0.34
PNKP-221ENST00000627317 DOCK3Q8IZD9 2030 aa17.2■□□□□ 0.34
PNKP-221ENST00000627317 ZNF236Q9UL36 1845 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 FLOT1O75955 427 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 IGHA2P01877 340 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 HMGCRP04035 888 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 BMP3P12645 472 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 LIFRP42702 1097 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 GJA8P48165 433 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 UBXN2AP68543 259 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 CCNA1P78396 465 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 IKQ13123 557 aaPredicted RBP17.19■□□□□ 0.34
PNKP-221ENST00000627317 MAP3K21Q5TCX8 1036 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
PNKP-221ENST00000627317 RASGRP2Q7LDG7 609 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 CATIPQ7Z7H3 387 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 TMTC2Q8N394 836 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 MB21D1Q8N884 522 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 NUDT12Q9BQG2 462 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 MOV10L1Q9BXT6 1211 aaKnown RBP17.19■□□□□ 0.34
PNKP-221ENST00000627317 SENP2Q9HC62 589 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 FBXO28Q9NVF7 368 aa17.19■□□□□ 0.34
PNKP-221ENST00000627317 PDE4DIPQ5VU43 2346 aa17.18■□□□□ 0.34
PNKP-221ENST00000627317 PDHBP11177 359 aa17.18■□□□□ 0.34
PNKP-221ENST00000627317 RBM25P49756 843 aaKnown RBP17.18■□□□□ 0.34
PNKP-221ENST00000627317 TRIM32Q13049 653 aa17.18■□□□□ 0.34
PNKP-221ENST00000627317 GRB14Q14449 540 aa17.18■□□□□ 0.34
PNKP-221ENST00000627317 Q6ZUG5 572 aa17.18■□□□□ 0.34
PNKP-221ENST00000627317 SHCBP1Q8NEM2 672 aa17.18■□□□□ 0.34
PNKP-221ENST00000627317 REPS2Q8NFH8 660 aa17.18■□□□□ 0.34
PNKP-221ENST00000627317 IL17RAQ96F46 866 aa17.18■□□□□ 0.34
PNKP-221ENST00000627317 SPATC1LQ9H0A9 340 aa17.18■□□□□ 0.34
PNKP-221ENST00000627317 RNF208Q9H0X6 261 aa17.18■□□□□ 0.34
PNKP-221ENST00000627317 PPP1R9AQ9ULJ8 1098 aa17.18■□□□□ 0.34
PNKP-221ENST00000627317 HOXC6P09630 235 aa17.17■□□□□ 0.34
PNKP-221ENST00000627317 PTPREP23469 700 aa17.17■□□□□ 0.34
PNKP-221ENST00000627317 SYNE3Q6ZMZ3 975 aa17.17■□□□□ 0.34
PNKP-221ENST00000627317 KCTD1Q719H9 257 aa17.17■□□□□ 0.34
PNKP-221ENST00000627317 ZNF654Q8IZM8 581 aa17.17■□□□□ 0.34
PNKP-221ENST00000627317 APBA2Q99767 749 aa17.17■□□□□ 0.34
PNKP-221ENST00000627317 PDRG1Q9NUG6 133 aa17.17■□□□□ 0.34
PNKP-221ENST00000627317 BIN2Q9UBW5 565 aaPredicted RBP17.17■□□□□ 0.34
PNKP-221ENST00000627317 FEM1BQ9UK73 627 aa17.17■□□□□ 0.34
PNKP-221ENST00000627317 SLC12A7Q9Y666 1083 aa17.17■□□□□ 0.34
PNKP-221ENST00000627317 FRMPD2Q68DX3 1309 aaPredicted RBP17.17■□□□□ 0.34
PNKP-221ENST00000627317 SLC15A5A6NIM6 579 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 TMEM232C9JQI7 657 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 VWA5AO00534 786 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 DDAH1O94760 285 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 PARP1P09874 1014 aaKnown RBP17.16■□□□□ 0.34
PNKP-221ENST00000627317 SNHG28P0DPA3 235 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms