RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 ZSCAN10Q96SZ4 725 aaPredicted RBP11.24□□□□□ -0.61
LINC01560-202ENST00000624822 NUP88Q99567 741 aaPredicted RBP11.24□□□□□ -0.61
LINC01560-202ENST00000624822 CWC22Q9HCG8 908 aaKnown RBP11.24□□□□□ -0.61
LINC01560-202ENST00000624822 TCP11L1Q9NUJ3 509 aa11.24□□□□□ -0.61
LINC01560-202ENST00000624822 ZSWIM5Q9P217 1185 aa11.24□□□□□ -0.61
LINC01560-202ENST00000624822 TRIM17Q9Y577 477 aa11.24□□□□□ -0.61
LINC01560-202ENST00000624822 DOCK3Q8IZD9 2030 aa11.24□□□□□ -0.61
LINC01560-202ENST00000624822 ERICH2A1L162 156 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 FMNL1O95466 1100 aaPredicted RBP11.23□□□□□ -0.61
LINC01560-202ENST00000624822 NDUFB10O96000 172 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 BCRP11274 1271 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 TOP1P11387 765 aaKnown RBP11.23□□□□□ -0.61
LINC01560-202ENST00000624822 SLC1A4P43007 532 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 LACTBP83111 547 aaPredicted RBP11.23□□□□□ -0.61
LINC01560-202ENST00000624822 COG2Q14746 738 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 NECTIN1Q15223 517 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 CCDC96Q2M329 555 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 STOX1Q6ZVD7 989 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 CTU1Q7Z7A3 348 aaKnown RBP11.23□□□□□ -0.61
LINC01560-202ENST00000624822 GMCL1P1Q8NEA9 526 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 NKX2-3Q8TAU0 364 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 TMEM47Q9BQJ4 181 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 KAT14Q9H8E8 782 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 EFCC1Q9HA90 598 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 SYNPO2Q9UMS6 1093 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 CTDP1Q9Y5B0 961 aaPredicted RBP11.23□□□□□ -0.61
LINC01560-202ENST00000624822 TAF6LQ9Y6J9 622 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 TNKSO95271 1327 aa11.23□□□□□ -0.61
LINC01560-202ENST00000624822 ZNFX1Q9P2E3 1918 aaKnown RBP11.23□□□□□ -0.61
LINC01560-202ENST00000624822 SPDYE16A6NNV3 312 aaPredicted RBP11.22□□□□□ -0.61
LINC01560-202ENST00000624822 PEX10O60683 326 aa11.22□□□□□ -0.61
LINC01560-202ENST00000624822 BMP3P12645 472 aa11.22□□□□□ -0.61
LINC01560-202ENST00000624822 ZKSCAN1P17029 563 aaPredicted RBP11.22□□□□□ -0.61
LINC01560-202ENST00000624822 MCCP23508 829 aa11.22□□□□□ -0.61
LINC01560-202ENST00000624822 PSMC4P43686 418 aa11.22□□□□□ -0.61
LINC01560-202ENST00000624822 FCGRTP55899 365 aa11.22□□□□□ -0.61
LINC01560-202ENST00000624822 PLS1Q14651 629 aa11.22□□□□□ -0.61
LINC01560-202ENST00000624822 SART3Q15020 963 aaKnown RBP11.22□□□□□ -0.61
LINC01560-202ENST00000624822 IFIT1BQ5T764 474 aaKnown RBP11.22□□□□□ -0.61
LINC01560-202ENST00000624822 CYB5R4Q7L1T6 521 aa11.22□□□□□ -0.61
LINC01560-202ENST00000624822 CHST3Q7LGC8 479 aa11.22□□□□□ -0.61
LINC01560-202ENST00000624822 ATG4CQ96DT6 458 aa11.22□□□□□ -0.61
LINC01560-202ENST00000624822 TTC14Q96N46 770 aa11.22□□□□□ -0.61
LINC01560-202ENST00000624822 ARHGAP39Q9C0H5 1083 aa11.22□□□□□ -0.61
LINC01560-202ENST00000624822 FBXO28Q9NVF7 368 aa11.22□□□□□ -0.61
LINC01560-202ENST00000624822 HOXC10Q9NYD6 342 aa11.22□□□□□ -0.61
LINC01560-202ENST00000624822 TMEM232C9JQI7 657 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 TNPO2O14787 897 aaKnown RBP11.21□□□□□ -0.61
LINC01560-202ENST00000624822 IFIT3O14879 490 aaKnown RBP11.21□□□□□ -0.61
LINC01560-202ENST00000624822 ERVK-9P63128 1117 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 ERVK-24P63145 666 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 WDR78Q5VTH9 848 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 KCTD1Q719H9 257 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 RASGRP2Q7LDG7 609 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 OTOP1Q7RTM1 612 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 DGKHQ86XP1 1220 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 TNS4Q8IZW8 715 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 ENAHQ8N8S7 591 aaPredicted RBP11.21□□□□□ -0.61
LINC01560-202ENST00000624822 PNMA1Q8ND90 353 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 GPRC5AQ8NFJ5 357 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 TMC2Q8TDI7 906 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 KIFC2Q96AC6 838 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 SLF1Q9BQI6 1058 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 TXNRD2Q9NNW7 524 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 RABGAP1Q9Y3P9 1069 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.61
LINC01560-202ENST00000624822 PLXNA1Q9UIW2 1896 aa11.21□□□□□ -0.62
LINC01560-202ENST00000624822 FRMPD2Q68DX3 1309 aaPredicted RBP11.2□□□□□ -0.62
LINC01560-202ENST00000624822 MYPNQ86TC9 1320 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 HOXD10P28358 340 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 MCM5P33992 734 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 SLC4A3P48751 1232 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 STAT2P52630 851 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 CCNA1P78396 465 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 WTAPQ15007 396 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 RCSD1Q6JBY9 416 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 MB21D2Q8IYB1 491 aaPredicted RBP11.2□□□□□ -0.62
LINC01560-202ENST00000624822 MB21D1Q8N884 522 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 PRPF38AQ8NAV1 312 aaKnown RBP11.2□□□□□ -0.62
LINC01560-202ENST00000624822 DCAF4Q8WV16 495 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 COA7Q96BR5 231 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 GMCL1Q96IK5 515 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 MCOLN1Q9GZU1 580 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 GPCPD1Q9NPB8 672 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 BTBD7Q9P203 1132 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 RBPJLQ9UBG7 517 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 MORF4L1Q9UBU8 362 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 FEM1BQ9UK73 627 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 PPP1R9AQ9ULJ8 1098 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 LHX6Q9UPM6 363 aa11.2□□□□□ -0.62
LINC01560-202ENST00000624822 PRC1O43663 620 aa11.19□□□□□ -0.62
LINC01560-202ENST00000624822 ZBED4O75132 1171 aa11.19□□□□□ -0.62
LINC01560-202ENST00000624822 CNMDO75829 334 aa11.19□□□□□ -0.62
LINC01560-202ENST00000624822 GNRH1P01148 92 aa11.19□□□□□ -0.62
LINC01560-202ENST00000624822 PDHBP11177 359 aa11.19□□□□□ -0.62
LINC01560-202ENST00000624822 CTGFP29279 349 aa11.19□□□□□ -0.62
LINC01560-202ENST00000624822 HSPA4P34932 840 aa11.19□□□□□ -0.62
LINC01560-202ENST00000624822 NOVP48745 357 aa11.19□□□□□ -0.62
LINC01560-202ENST00000624822 CAP1Q01518 475 aa11.19□□□□□ -0.62
LINC01560-202ENST00000624822 KRT32Q14532 448 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms