RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 TDHQ8IZJ6 230 aa16.34■□□□□ 0.21
USH1C-211ENST00000624811 TINF2Q9BSI4 451 aa16.34■□□□□ 0.21
USH1C-211ENST00000624811 TEX13BQ9BXU2 312 aa16.34■□□□□ 0.21
USH1C-211ENST00000624811 RAVER2Q9HCJ3 691 aaKnown RBP16.34■□□□□ 0.21
USH1C-211ENST00000624811 INCENPQ9NQS7 918 aa16.34■□□□□ 0.21
USH1C-211ENST00000624811 MTMR4Q9NYA4 1195 aa16.34■□□□□ 0.21
USH1C-211ENST00000624811 LAMA3Q16787 3333 aa16.34■□□□□ 0.21
USH1C-211ENST00000624811 ZBED4O75132 1171 aa16.33■□□□□ 0.2
USH1C-211ENST00000624811 TTLL1O95922 423 aa16.33■□□□□ 0.2
USH1C-211ENST00000624811 SLC3A2P08195 630 aaKnown RBP16.33■□□□□ 0.2
USH1C-211ENST00000624811 COPB2P35606 906 aa16.33■□□□□ 0.2
USH1C-211ENST00000624811 ADCYAP1R1P41586 468 aa16.33■□□□□ 0.2
USH1C-211ENST00000624811 CTDSPL2Q05D32 466 aa16.33■□□□□ 0.2
USH1C-211ENST00000624811 PDE4BQ07343 736 aa16.33■□□□□ 0.2
USH1C-211ENST00000624811 LRRC41Q15345 812 aa16.33■□□□□ 0.2
USH1C-211ENST00000624811 SLFN13Q68D06 897 aa16.33■□□□□ 0.2
USH1C-211ENST00000624811 PRPF38AQ8NAV1 312 aaKnown RBP16.33■□□□□ 0.2
USH1C-211ENST00000624811 LENG1Q96BZ8 264 aaPredicted RBP16.33■□□□□ 0.2
USH1C-211ENST00000624811 DDX11Q96FC9 970 aa16.33■□□□□ 0.2
USH1C-211ENST00000624811 SALL3Q9BXA9 1300 aa16.33■□□□□ 0.2
USH1C-211ENST00000624811 DNAH12Q6ZR08 3092 aa16.32■□□□□ 0.2
USH1C-211ENST00000624811 PGK1P00558 417 aa16.32■□□□□ 0.2
USH1C-211ENST00000624811 TRIM60Q495X7 471 aa16.32■□□□□ 0.2
USH1C-211ENST00000624811 SLC39A5Q6ZMH5 540 aa16.32■□□□□ 0.2
USH1C-211ENST00000624811 NEDD1Q8NHV4 660 aa16.32■□□□□ 0.2
USH1C-211ENST00000624811 MKL1Q969V6 931 aa16.32■□□□□ 0.2
USH1C-211ENST00000624811 XPNPEP3Q9NQH7 507 aa16.32■□□□□ 0.2
USH1C-211ENST00000624811 PRDM5Q9NQX1 630 aaPredicted RBP16.32■□□□□ 0.2
USH1C-211ENST00000624811 PLIN4Q96Q06 1357 aa16.31■□□□□ 0.2
USH1C-211ENST00000624811 FOXP2O15409 715 aa16.31■□□□□ 0.2
USH1C-211ENST00000624811 RARBP10826 455 aa16.31■□□□□ 0.2
USH1C-211ENST00000624811 BMP3P12645 472 aa16.31■□□□□ 0.2
USH1C-211ENST00000624811 VPS53Q5VIR6 699 aa16.31■□□□□ 0.2
USH1C-211ENST00000624811 Q7L0L9 218 aa16.31■□□□□ 0.2
USH1C-211ENST00000624811 GMCL1P1Q8NEA9 526 aa16.31■□□□□ 0.2
USH1C-211ENST00000624811 LBHD1Q9BQE6 289 aaPredicted RBP16.31■□□□□ 0.2
USH1C-211ENST00000624811 HOMER2Q9NSB8 354 aa16.31■□□□□ 0.2
USH1C-211ENST00000624811 PRKAG2Q9UGJ0 569 aa16.31■□□□□ 0.2
USH1C-211ENST00000624811 FEM1BQ9UK73 627 aa16.31■□□□□ 0.2
USH1C-211ENST00000624811 MTMR7Q9Y216 660 aa16.31■□□□□ 0.2
USH1C-211ENST00000624811 DIS3Q9Y2L1 958 aaKnown RBP16.31■□□□□ 0.2
USH1C-211ENST00000624811 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
USH1C-211ENST00000624811 NMT2O60551 498 aa16.3■□□□□ 0.2
USH1C-211ENST00000624811 ZNF865P0CJ78 1059 aaPredicted RBP16.3■□□□□ 0.2
USH1C-211ENST00000624811 IKQ13123 557 aaPredicted RBP16.3■□□□□ 0.2
USH1C-211ENST00000624811 RASGRP2Q7LDG7 609 aa16.3■□□□□ 0.2
USH1C-211ENST00000624811 EVI5LQ96CN4 794 aa16.3■□□□□ 0.2
USH1C-211ENST00000624811 SLC38A10Q9HBR0 1119 aa16.3■□□□□ 0.2
USH1C-211ENST00000624811 ZHX1Q9UKY1 873 aaPredicted RBP16.3■□□□□ 0.2
USH1C-211ENST00000624811 CNPY2Q9Y2B0 182 aa16.3■□□□□ 0.2
USH1C-211ENST00000624811 TACC3Q9Y6A5 838 aa16.3■□□□□ 0.2
USH1C-211ENST00000624811 TSPY2A6NKD2 308 aa16.29■□□□□ 0.2
USH1C-211ENST00000624811 RANBP6O60518 1105 aaKnown RBP16.29■□□□□ 0.2
USH1C-211ENST00000624811 AKR1A1P14550 325 aa16.29■□□□□ 0.2
USH1C-211ENST00000624811 MCCP23508 829 aa16.29■□□□□ 0.2
USH1C-211ENST00000624811 PDE1AP54750 535 aa16.29■□□□□ 0.2
USH1C-211ENST00000624811 LRIT3Q3SXY7 679 aa16.29■□□□□ 0.2
USH1C-211ENST00000624811 ANKRD35Q8N283 1001 aa16.29■□□□□ 0.2
USH1C-211ENST00000624811 NRBP1Q9UHY1 535 aa16.29■□□□□ 0.2
USH1C-211ENST00000624811 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
USH1C-211ENST00000624811 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.29■□□□□ 0.2
USH1C-211ENST00000624811 SNAI1O95863 264 aaPredicted RBP16.28■□□□□ 0.2
USH1C-211ENST00000624811 SNAP25P60880 206 aa16.28■□□□□ 0.2
USH1C-211ENST00000624811 HDAC1Q13547 482 aaPredicted RBP16.28■□□□□ 0.2
USH1C-211ENST00000624811 B4GALNT3Q6L9W6 998 aa16.28■□□□□ 0.2
USH1C-211ENST00000624811 DEFB123Q8N688 67 aa16.28■□□□□ 0.2
USH1C-211ENST00000624811 FAM227BQ96M60 508 aa16.28■□□□□ 0.2
USH1C-211ENST00000624811 LNPKQ9C0E8 428 aa16.28■□□□□ 0.2
USH1C-211ENST00000624811 TOMM22Q9NS69 142 aa16.28■□□□□ 0.2
USH1C-211ENST00000624811 PHF24Q9UPV7 400 aa16.28■□□□□ 0.2
USH1C-211ENST00000624811 DNAJC25-GNG10A0A024R161 153 aa16.27■□□□□ 0.2
USH1C-211ENST00000624811 A0A0D9SFI3 127 aa16.27■□□□□ 0.2
USH1C-211ENST00000624811 ATP2A1O14983 1001 aa16.27■□□□□ 0.2
USH1C-211ENST00000624811 SLC1A4P43007 532 aa16.27■□□□□ 0.2
USH1C-211ENST00000624811 RRP12Q5JTH9 1297 aaKnown RBP16.27■□□□□ 0.2
USH1C-211ENST00000624811 CCDC174Q6PII3 467 aa16.27■□□□□ 0.2
USH1C-211ENST00000624811 KCTD1Q719H9 257 aa16.27■□□□□ 0.2
USH1C-211ENST00000624811 SH3RF1Q7Z6J0 888 aa16.27■□□□□ 0.2
USH1C-211ENST00000624811 RNF180Q86T96 592 aa16.27■□□□□ 0.2
USH1C-211ENST00000624811 AGBL1Q96MI9 1066 aa16.27■□□□□ 0.2
USH1C-211ENST00000624811 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
USH1C-211ENST00000624811 SYNPO2Q9UMS6 1093 aa16.27■□□□□ 0.2
USH1C-211ENST00000624811 SYNRGQ9UMZ2 1314 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 TRIM6-TRIM34B2RNG4 842 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 STAT2P52630 851 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 TLE2Q04725 743 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 SNX17Q15036 470 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 CHST13Q8NET6 341 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 STAG1Q8WVM7 1258 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 BADQ92934 168 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 RILPL2Q969X0 211 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 FGD4Q96M96 766 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 PDLIM7Q9NR12 457 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 HELLSQ9NRZ9 838 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.26■□□□□ 0.19
USH1C-211ENST00000624811 FBXO40Q9UH90 709 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 FAM184BQ9ULE4 1060 aa16.26■□□□□ 0.19
USH1C-211ENST00000624811 SYNGAP1Q96PV0 1343 aa16.25■□□□□ 0.19
USH1C-211ENST00000624811 A0A1W2PQ45 241 aaPredicted RBP16.25■□□□□ 0.19
USH1C-211ENST00000624811 A0A1W2PQY0 241 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms