RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 MMP14P50281 582 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 GNL2Q13823 731 aaKnown RBP11.92□□□□□ -0.5
ATRX-216ENST00000624403 SAFBQ15424 915 aaKnown RBP eCLIP11.92□□□□□ -0.5
ATRX-216ENST00000624403 PFKFB3Q16875 520 aaPredicted RBP11.92□□□□□ -0.5
ATRX-216ENST00000624403 SHROOM1Q2M3G4 852 aaPredicted RBP11.92□□□□□ -0.5
ATRX-216ENST00000624403 ZSCAN23Q3MJ62 389 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 CERKLQ49MI3 558 aaPredicted RBP11.92□□□□□ -0.5
ATRX-216ENST00000624403 C6orf132Q5T0Z8 1188 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 FKBP1CQ5VVH2 108 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 DIS3L2Q8IYB7 885 aaKnown RBP11.92□□□□□ -0.5
ATRX-216ENST00000624403 LRRC47Q8N1G4 583 aaKnown RBP11.92□□□□□ -0.5
ATRX-216ENST00000624403 PIBF1Q8WXW3 757 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 CSRNP1Q96S65 589 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 LZTS2Q9BRK4 669 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 VEZTQ9HBM0 779 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 RTEL1Q9NZ71 1219 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 VPS54Q9P1Q0 977 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 TCHHQ07283 1943 aa11.92□□□□□ -0.5
ATRX-216ENST00000624403 ZNF541Q9H0D2 1346 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 BTBD18B2RXH4 712 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 BHMG1C9JSJ3 638 aaPredicted RBP11.91□□□□□ -0.5
ATRX-216ENST00000624403 KLRF2D3W0D1 207 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 WNT10BO00744 389 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 MYO1BO43795 1136 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 SCG2P13521 617 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 XBP1P17861 261 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 NBPF9Q3BBW0 867 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 USP17L2Q6R6M4 530 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 ARHGAP27Q6ZUM4 889 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 PGBD1Q96JS3 809 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 PHF20Q9BVI0 1012 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 FOXP1Q9H334 677 aaPredicted RBP11.91□□□□□ -0.5
ATRX-216ENST00000624403 CLIC4Q9Y696 253 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 GJA3Q9Y6H8 435 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 GREB1LQ9C091 1923 aaPredicted RBP11.91□□□□□ -0.5
ATRX-216ENST00000624403 MYH15Q9Y2K3 1946 aa11.91□□□□□ -0.5
ATRX-216ENST00000624403 GOLGA6L4A6NEF3 574 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 CYTH3O43739 400 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 GDF11O95390 407 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 YEATS4O95619 227 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 PDHBP11177 359 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 VEGFAP15692 232 aaPredicted RBP11.9□□□□□ -0.5
ATRX-216ENST00000624403 NASPP49321 788 aaPredicted RBP11.9□□□□□ -0.5
ATRX-216ENST00000624403 ZNF445P59923 1031 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 JAG1P78504 1218 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 ATP2B2Q01814 1243 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 RRP1BQ14684 758 aaKnown RBP11.9□□□□□ -0.5
ATRX-216ENST00000624403 ABCB5Q2M3G0 1257 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 PROX2Q3B8N5 592 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 RBM26Q5T8P6 1007 aaKnown RBP11.9□□□□□ -0.5
ATRX-216ENST00000624403 ANO1Q5XXA6 986 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 FAM83AQ86UY5 434 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 NOSTRINQ8IVI9 506 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 DPF2Q92785 391 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 SYAP1Q96A49 352 aaPredicted RBP11.9□□□□□ -0.5
ATRX-216ENST00000624403 KCTD12Q96CX2 325 aaKnown RBP11.9□□□□□ -0.5
ATRX-216ENST00000624403 SPZ1Q9BXG8 430 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.9□□□□□ -0.5
ATRX-216ENST00000624403 POLR3EQ9NVU0 708 aa11.9□□□□□ -0.5
ATRX-216ENST00000624403 HERC5Q9UII4 1024 aaKnown RBP11.9□□□□□ -0.5
ATRX-216ENST00000624403 FRMPD2Q68DX3 1309 aaPredicted RBP11.89□□□□□ -0.51
ATRX-216ENST00000624403 FSD2A1L4K1 749 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 EGFRP00533 1210 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 SNHG28P0DPA3 235 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 EEF2P13639 858 aaKnown RBP11.89□□□□□ -0.51
ATRX-216ENST00000624403 LIG1P18858 919 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 SMARCA1P28370 1054 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 KRT2P35908 639 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 NR5A1Q13285 461 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 SEPT2Q15019 361 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 STK38Q15208 465 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 ASPRV1Q53RT3 343 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 CCDC183Q5T5S1 534 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 TMEM179Q6ZVK1 233 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 SIAH1Q8IUQ4 282 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 LINC00301Q8NCQ3 95 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 TMEM39BQ9GZU3 492 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 CPVLQ9H3G5 476 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 KANSL2Q9H9L4 492 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 NYAP2Q9P242 653 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 PGAP2Q9UHJ9 254 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 CNOT7Q9UIV1 285 aaKnown RBP11.89□□□□□ -0.51
ATRX-216ENST00000624403 MYH8P13535 1937 aa11.89□□□□□ -0.51
ATRX-216ENST00000624403 GH2P01242 217 aa11.88□□□□□ -0.51
ATRX-216ENST00000624403 LMNB1P20700 586 aa11.88□□□□□ -0.51
ATRX-216ENST00000624403 ZNF543Q08ER8 600 aa11.88□□□□□ -0.51
ATRX-216ENST00000624403 NPY5RQ15761 445 aa11.88□□□□□ -0.51
ATRX-216ENST00000624403 TBC1D10BQ4KMP7 808 aaPredicted RBP11.88□□□□□ -0.51
ATRX-216ENST00000624403 SAMD7Q7Z3H4 446 aa11.88□□□□□ -0.51
ATRX-216ENST00000624403 GAS2L3Q86XJ1 694 aa11.88□□□□□ -0.51
ATRX-216ENST00000624403 BICD2Q8TD16 824 aa11.88□□□□□ -0.51
ATRX-216ENST00000624403 KCNG4Q8TDN1 519 aa11.88□□□□□ -0.51
ATRX-216ENST00000624403 GPKOWQ92917 476 aaPredicted RBP eCLIP11.88□□□□□ -0.51
ATRX-216ENST00000624403 MKL1Q969V6 931 aa11.88□□□□□ -0.51
ATRX-216ENST00000624403 UBA5Q9GZZ9 404 aa11.88□□□□□ -0.51
ATRX-216ENST00000624403 GPCPD1Q9NPB8 672 aa11.88□□□□□ -0.51
ATRX-216ENST00000624403 SH3GLB2Q9NR46 395 aa11.88□□□□□ -0.51
ATRX-216ENST00000624403 SYCE3A1L190 88 aa11.87□□□□□ -0.51
ATRX-216ENST00000624403 GOLGA6L3A6NEY3 463 aa11.87□□□□□ -0.51
ATRX-216ENST00000624403 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms