RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 AGPAT5Q9NUQ2 364 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 GDAQ9Y2T3 454 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 CCDC189A1A4V9 331 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 C8orf74Q6P047 294 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 TTC5Q8N0Z6 440 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 PARP1P09874 1014 aaKnown RBP16.93■□□□□ 0.3
PMS1-221ENST00000624204 NR1D1P20393 614 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 VAV2P52735 878 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 SLC4A8Q2Y0W8 1093 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 ALS2CLQ60I27 953 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 STIM2Q9P246 746 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 TMEM2Q9UHN6 1383 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 ADAMTS13Q76LX8 1427 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 C21orf2O43822 256 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 PPP1R37O75864 691 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 SMTNP53814 917 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 ZC3H6P61129 1189 aaKnown RBP16.93■□□□□ 0.3
PMS1-221ENST00000624204 NAA25Q14CX7 972 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 SNCBQ16143 134 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 NFRKBQ6P4R8 1299 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 MAATS1Q7Z4T9 603 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 NLRP14Q86W24 1093 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 NHEJ1Q9H9Q4 299 aaPredicted RBP16.93■□□□□ 0.3
PMS1-221ENST00000624204 GPR108Q9NPR9 543 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 LRWD1Q9UFC0 647 aa16.93■□□□□ 0.3
PMS1-221ENST00000624204 A6NNZ2 444 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 BRD2P25440 801 aaKnown RBP16.92■□□□□ 0.3
PMS1-221ENST00000624204 TUBB8Q3ZCM7 444 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 CREG2Q8IUH2 290 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 MB21D1Q8N884 522 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 TOPAZ1Q8N9V7 1692 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 WDR19Q8NEZ3 1342 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 LRRC10BA6NIK2 292 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 EZRP15311 586 aaKnown RBP16.92■□□□□ 0.3
PMS1-221ENST00000624204 IFNAR1P17181 557 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 SPA17Q15506 151 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 EMBQ6PCB8 327 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 MYCBPAPQ8TBZ2 947 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 MLXIPQ9HAP2 919 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 AATFQ9NY61 560 aaKnown RBP eCLIP16.92■□□□□ 0.3
PMS1-221ENST00000624204 ZSWIM5Q9P217 1185 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 RWDD2AQ9UIY3 292 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 NFU1Q9UMS0 254 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 SNX12Q9UMY4 172 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 KDM6AO15550 1401 aaPredicted RBP16.92■□□□□ 0.3
PMS1-221ENST00000624204 TBC1D31Q96DN5 1066 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.92■□□□□ 0.3
PMS1-221ENST00000624204 NLRP2Q9NX02 1062 aa16.92■□□□□ 0.3
PMS1-221ENST00000624204 ANO9A1A5B4 782 aa16.91■□□□□ 0.3
PMS1-221ENST00000624204 TACC1O75410 805 aa16.91■□□□□ 0.3
PMS1-221ENST00000624204 PAFAH1B1P43034 410 aa16.91■□□□□ 0.3
PMS1-221ENST00000624204 PTGISQ16647 500 aa16.91■□□□□ 0.3
PMS1-221ENST00000624204 CAPN6Q9Y6Q1 641 aa16.91■□□□□ 0.3
PMS1-221ENST00000624204 ZSCAN5CA6NGD5 496 aaPredicted RBP16.91■□□□□ 0.3
PMS1-221ENST00000624204 B4DLN1 442 aa16.91■□□□□ 0.3
PMS1-221ENST00000624204 HGSO14964 777 aaPredicted RBP16.91■□□□□ 0.3
PMS1-221ENST00000624204 MOCS3O95396 460 aa16.91■□□□□ 0.3
PMS1-221ENST00000624204 GCFC2P16383 781 aaKnown RBP16.91■□□□□ 0.3
PMS1-221ENST00000624204 MMGT1Q8N4V1 131 aa16.91■□□□□ 0.3
PMS1-221ENST00000624204 TACO1Q9BSH4 297 aaKnown RBP16.91■□□□□ 0.3
PMS1-221ENST00000624204 CDC25CP30307 473 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 GBP2P32456 591 aaPredicted RBP16.9■□□□□ 0.3
PMS1-221ENST00000624204 PEX19P40855 299 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 KLK7P49862 253 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 CASP7P55210 303 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 NAIF1Q69YI7 327 aaPredicted RBP16.9■□□□□ 0.3
PMS1-221ENST00000624204 CCDC42Q96M95 316 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 UBAC1Q9BSL1 405 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 HAUS2Q9NVX0 235 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 MAGEC2Q9UBF1 373 aaPredicted RBP16.9■□□□□ 0.3
PMS1-221ENST00000624204 DDX20Q9UHI6 824 aaKnown RBP16.9■□□□□ 0.3
PMS1-221ENST00000624204 NCK2O43639 380 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 PPP1R12BO60237 982 aaPredicted RBP16.9■□□□□ 0.3
PMS1-221ENST00000624204 EPB41P11171 864 aaKnown RBP16.9■□□□□ 0.3
PMS1-221ENST00000624204 SH3RF1Q7Z6J0 888 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 TRIM47Q96LD4 638 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 DNAJC7Q99615 494 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 XDHP47989 1333 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 RICTORQ6R327 1708 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 DEXIO95424 95 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 FAM153BP0C7A2 387 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 CSB-PGBD3P0DP91 1061 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 PRCPP42785 496 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 CARSP49589 748 aaKnown RBP16.9■□□□□ 0.3
PMS1-221ENST00000624204 MST1RQ04912 1400 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 CCDC57Q2TAC2 916 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 FAM153CQ494X1 144 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 EARS2Q5JPH6 523 aaKnown RBP16.9■□□□□ 0.3
PMS1-221ENST00000624204 PARP9Q8IXQ6 854 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 TEX11Q8IYF3 940 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 FNBP4Q8N3X1 1017 aaPredicted RBP16.9■□□□□ 0.3
PMS1-221ENST00000624204 HELBQ8NG08 1087 aaPredicted RBP16.9■□□□□ 0.3
PMS1-221ENST00000624204 FAM153AQ9UHL3 310 aa16.9■□□□□ 0.3
PMS1-221ENST00000624204 A0A0G2JS52 829 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 ZNF233A6NK53 670 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 HAUS3Q68CZ6 603 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 WDR17Q8IZU2 1322 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 USO1O60763 962 aaKnown RBP16.89■□□□□ 0.29
PMS1-221ENST00000624204 RASSF9O75901 435 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 SNRPA1P09661 255 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 262.8 ms