RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CARD10Q9BWT7 1032 aa17.89■□□□□ 0.45
GABRB3-215ENST00000622697 POLR2FP61218 127 aaKnown RBP17.88■□□□□ 0.45
GABRB3-215ENST00000622697 UAP1Q16222 522 aaPredicted RBP17.88■□□□□ 0.45
GABRB3-215ENST00000622697 HLFQ16534 295 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 ERFEQ4G0M1 354 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 WDR44Q5JSH3 913 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 PSMD1Q99460 953 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 RNF26Q9BY78 433 aaPredicted RBP17.88■□□□□ 0.45
GABRB3-215ENST00000622697 ZNF804BA4D1E1 1349 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 ZMYND10O75800 440 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 FLOT1O75955 427 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 CCDC6Q16204 474 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 DDX12PQ92771 950 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 H7C1W4 665 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 IKBKBO14920 756 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 PIGBQ92521 554 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 PANK4Q9NVE7 773 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 SMTNP53814 917 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 FAM182BQ5T319 152 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 ABCA6Q8N139 1617 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 ACRBPQ8NEB7 543 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 USTQ9Y2C2 406 aa17.88■□□□□ 0.45
GABRB3-215ENST00000622697 KCNK3O14649 394 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 PAK2Q13177 524 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 NSMFQ6X4W1 530 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 ADAT2Q7Z6V5 191 aaKnown RBP17.87■□□□□ 0.45
GABRB3-215ENST00000622697 MPHOSPH6Q99547 160 aaKnown RBP17.87■□□□□ 0.45
GABRB3-215ENST00000622697 GJA3Q9Y6H8 435 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 PNPLA6Q8IY17 1366 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 NAP1L3Q99457 506 aaPredicted RBP17.87■□□□□ 0.45
GABRB3-215ENST00000622697 LONP1P36776 959 aaKnown RBP17.87■□□□□ 0.45
GABRB3-215ENST00000622697 ZSCAN26Q16670 478 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 TRIM58Q8NG06 486 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 KIFAP3Q92845 792 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 CNOT6LQ96LI5 555 aaKnown RBP17.87■□□□□ 0.45
GABRB3-215ENST00000622697 TUBGCP2Q9BSJ2 902 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 GLT8D2Q9H1C3 349 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 PDE11AQ9HCR9 933 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 DDX25Q9UHL0 483 aaKnown RBP17.87■□□□□ 0.45
GABRB3-215ENST00000622697 CHGBP05060 677 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 IL6STP40189 918 aaPredicted RBP17.87■□□□□ 0.45
GABRB3-215ENST00000622697 KIAA0825Q8IV33 1275 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 TTLL11Q8NHH1 800 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 GSDMAQ96QA5 445 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 QRICH2Q9H0J4 1663 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 LRRC41Q15345 812 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 NT5C3AQ9H0P0 336 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 CEP83Q9Y592 693 aa17.87■□□□□ 0.45
GABRB3-215ENST00000622697 ACTN4O43707 911 aaKnown RBP17.86■□□□□ 0.45
GABRB3-215ENST00000622697 CYP4A11Q02928 519 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 UBL4BQ8N7F7 174 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 TBC1D22AQ8WUA7 517 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 DYNLL2Q96FJ2 89 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 ATP8A2Q9NTI2 1148 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 WDR17Q8IZU2 1322 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 CACNB1Q02641 598 aaPredicted RBP17.86■□□□□ 0.45
GABRB3-215ENST00000622697 CERS3Q8IU89 383 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 XRCC5P13010 732 aaKnown RBP17.86■□□□□ 0.45
GABRB3-215ENST00000622697 CASP1P29466 404 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 TBC1D10CQ8IV04 446 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 SH2D4AQ9H788 454 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 ATG3Q9NT62 314 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 IFNAR1P17181 557 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 FERMT1Q9BQL6 677 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 ASIC3Q9UHC3 531 aa17.86■□□□□ 0.45
GABRB3-215ENST00000622697 USP17L8P0C7I0 530 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 HAUS4Q9H6D7 363 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 ATP1A2P50993 1020 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 CDC42BPBQ9Y5S2 1711 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.85■□□□□ 0.45
GABRB3-215ENST00000622697 PRKG1Q13976 671 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 C6orf163Q5TEZ5 329 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 LRRC45Q96CN5 670 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 A2ML1A8K2U0 1454 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 CROCC2H7BZ55 1655 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 ALKQ9UM73 1620 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 SORBS3O60504 671 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 ERCC5P28715 1186 aaPredicted RBP17.85■□□□□ 0.45
GABRB3-215ENST00000622697 INPP5BP32019 993 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 TTC19Q6DKK2 380 aaPredicted RBP17.85■□□□□ 0.45
GABRB3-215ENST00000622697 CCDC105Q8IYK2 499 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 AGTPBP1Q9UPW5 1226 aa17.85■□□□□ 0.45
GABRB3-215ENST00000622697 RASSF7Q02833 373 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 CYB5R4Q7L1T6 521 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.84■□□□□ 0.45
GABRB3-215ENST00000622697 PLEKHA8P1O95397 391 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 SLFN14P0C7P3 912 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 SUSD4Q5VX71 490 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 TEKT1Q969V4 418 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 PCDHA4Q9UN74 947 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 GAS7O60861 476 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 LONRF2Q1L5Z9 754 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 PPANQ9NQ55 473 aaKnown RBP17.84■□□□□ 0.45
GABRB3-215ENST00000622697 MED14O60244 1454 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 ADAM9Q13443 819 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 VSTM4Q8IW00 320 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 CDC23Q9UJX2 597 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 HYOU1Q9Y4L1 999 aa17.84■□□□□ 0.45
GABRB3-215ENST00000622697 E7EVH7 732 aa17.83■□□□□ 0.45
GABRB3-215ENST00000622697 IRX5P78411 483 aaPredicted RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms