RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 MYH7BA7E2Y1 1941 aa13.15□□□□□ -0.3
LINC00963-214ENST00000622680 ADAMTS4O75173 837 aa13.15□□□□□ -0.3
LINC00963-214ENST00000622680 ZNF865P0CJ78 1059 aaPredicted RBP13.15□□□□□ -0.3
LINC00963-214ENST00000622680 RASA1P20936 1047 aa13.15□□□□□ -0.3
LINC00963-214ENST00000622680 UBE3CQ15386 1083 aa13.15□□□□□ -0.3
LINC00963-214ENST00000622680 C1orf53Q5VUE5 145 aa13.15□□□□□ -0.3
LINC00963-214ENST00000622680 SNRNP48Q6IEG0 339 aaKnown RBP13.15□□□□□ -0.3
LINC00963-214ENST00000622680 RNF180Q86T96 592 aa13.15□□□□□ -0.3
LINC00963-214ENST00000622680 MAFAQ8NHW3 353 aaPredicted RBP13.15□□□□□ -0.3
LINC00963-214ENST00000622680 RNPC3Q96LT9 517 aaKnown RBP13.15□□□□□ -0.3
LINC00963-214ENST00000622680 SEMA6BQ9H3T3 888 aa13.15□□□□□ -0.3
LINC00963-214ENST00000622680 ARPP21Q9UBL0 812 aaPredicted RBP13.15□□□□□ -0.3
LINC00963-214ENST00000622680 RIPK3Q9Y572 518 aa13.15□□□□□ -0.3
LINC00963-214ENST00000622680 BDP1A6H8Y1 2624 aa13.15□□□□□ -0.3
LINC00963-214ENST00000622680 KIAA1217Q5T5P2 1943 aa13.15□□□□□ -0.3
LINC00963-214ENST00000622680 LAMA4Q16363 1823 aa13.14□□□□□ -0.31
LINC00963-214ENST00000622680 MYADML2A6NDP7 307 aa13.14□□□□□ -0.31
LINC00963-214ENST00000622680 ADCY6O43306 1168 aa13.14□□□□□ -0.31
LINC00963-214ENST00000622680 MS4A1P11836 297 aa13.14□□□□□ -0.31
LINC00963-214ENST00000622680 AKR1A1P14550 325 aa13.14□□□□□ -0.31
LINC00963-214ENST00000622680 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
LINC00963-214ENST00000622680 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
LINC00963-214ENST00000622680 SMAD3P84022 425 aaKnown RBP13.14□□□□□ -0.31
LINC00963-214ENST00000622680 TSHZ3Q63HK5 1081 aa13.14□□□□□ -0.31
LINC00963-214ENST00000622680 SLF1Q9BQI6 1058 aa13.14□□□□□ -0.31
LINC00963-214ENST00000622680 NRBP1Q9UHY1 535 aa13.14□□□□□ -0.31
LINC00963-214ENST00000622680 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
LINC00963-214ENST00000622680 NDUFB10O96000 172 aa13.13□□□□□ -0.31
LINC00963-214ENST00000622680 RAG1P15918 1043 aa13.13□□□□□ -0.31
LINC00963-214ENST00000622680 TEX13BQ9BXU2 312 aa13.13□□□□□ -0.31
LINC00963-214ENST00000622680 LRRCC1Q9C099 1032 aa13.13□□□□□ -0.31
LINC00963-214ENST00000622680 EPB41L4AQ9HCS5 686 aaPredicted RBP13.13□□□□□ -0.31
LINC00963-214ENST00000622680 ZHX1Q9UKY1 873 aaPredicted RBP13.13□□□□□ -0.31
LINC00963-214ENST00000622680 DIS3Q9Y2L1 958 aaKnown RBP13.13□□□□□ -0.31
LINC00963-214ENST00000622680 TACC3Q9Y6A5 838 aa13.13□□□□□ -0.31
LINC00963-214ENST00000622680 TET1Q8NFU7 2136 aa13.13□□□□□ -0.31
LINC00963-214ENST00000622680 GSG1L2A8MUP6 293 aa13.12□□□□□ -0.31
LINC00963-214ENST00000622680 MINDY4BA8MYZ0 360 aa13.12□□□□□ -0.31
LINC00963-214ENST00000622680 KIAA0355O15063 1070 aa13.12□□□□□ -0.31
LINC00963-214ENST00000622680 SNAI1O95863 264 aaPredicted RBP13.12□□□□□ -0.31
LINC00963-214ENST00000622680 FOSL2P15408 326 aa13.12□□□□□ -0.31
LINC00963-214ENST00000622680 COPB2P35606 906 aa13.12□□□□□ -0.31
LINC00963-214ENST00000622680 ACLYP53396 1101 aa13.12□□□□□ -0.31
LINC00963-214ENST00000622680 FPGSQ05932 587 aa13.12□□□□□ -0.31
LINC00963-214ENST00000622680 C20orf194Q5TEA3 1177 aa13.12□□□□□ -0.31
LINC00963-214ENST00000622680 ZSCAN25Q6NSZ9 544 aa13.12□□□□□ -0.31
LINC00963-214ENST00000622680 CPXCR1Q8N123 301 aa13.12□□□□□ -0.31
LINC00963-214ENST00000622680 STRBPQ96SI9 672 aaKnown RBP13.12□□□□□ -0.31
LINC00963-214ENST00000622680 STARD7Q9NQZ5 370 aa13.12□□□□□ -0.31
LINC00963-214ENST00000622680 TMEM39AQ9NV64 488 aa13.12□□□□□ -0.31
LINC00963-214ENST00000622680 SCN10AQ9Y5Y9 1956 aa13.11□□□□□ -0.31
LINC00963-214ENST00000622680 DNAJC25-GNG10A0A024R161 153 aa13.11□□□□□ -0.31
LINC00963-214ENST00000622680 F5H6K3 240 aa13.11□□□□□ -0.31
LINC00963-214ENST00000622680 PRDM1O75626 825 aa13.11□□□□□ -0.31
LINC00963-214ENST00000622680 KLRC3Q07444 240 aa13.11□□□□□ -0.31
LINC00963-214ENST00000622680 FAAP100Q0VG06 881 aa13.11□□□□□ -0.31
LINC00963-214ENST00000622680 LRRC47Q8N1G4 583 aaKnown RBP13.11□□□□□ -0.31
LINC00963-214ENST00000622680 OSBP2Q969R2 916 aa13.11□□□□□ -0.31
LINC00963-214ENST00000622680 DDX11Q96FC9 970 aa13.11□□□□□ -0.31
LINC00963-214ENST00000622680 FGD4Q96M96 766 aa13.11□□□□□ -0.31
LINC00963-214ENST00000622680 MKNK2Q9HBH9 465 aa13.11□□□□□ -0.31
LINC00963-214ENST00000622680 RAVER2Q9HCJ3 691 aaKnown RBP13.11□□□□□ -0.31
LINC00963-214ENST00000622680 NYAP2Q9P242 653 aa13.11□□□□□ -0.31
LINC00963-214ENST00000622680 SYNGAP1Q96PV0 1343 aa13.11□□□□□ -0.31
LINC00963-214ENST00000622680 BRWD1Q9NSI6 2320 aa13.1□□□□□ -0.31
LINC00963-214ENST00000622680 COL4A4P53420 1690 aaPredicted RBP13.1□□□□□ -0.31
LINC00963-214ENST00000622680 IGKV6D-41A0A0C4DH26 115 aa13.1□□□□□ -0.31
LINC00963-214ENST00000622680 M0R2C6 588 aa13.1□□□□□ -0.31
LINC00963-214ENST00000622680 C6orf222P0C671 652 aaPredicted RBP13.1□□□□□ -0.31
LINC00963-214ENST00000622680 KCNA10Q16322 511 aa13.1□□□□□ -0.31
LINC00963-214ENST00000622680 SBK1Q52WX2 424 aa13.1□□□□□ -0.31
LINC00963-214ENST00000622680 CCSAPQ6IQ19 270 aaPredicted RBP13.1□□□□□ -0.31
LINC00963-214ENST00000622680 KIFC2Q96AC6 838 aa13.1□□□□□ -0.31
LINC00963-214ENST00000622680 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
LINC00963-214ENST00000622680 HOMER2Q9NSB8 354 aa13.1□□□□□ -0.31
LINC00963-214ENST00000622680 CLIP2Q9UDT6 1046 aa13.1□□□□□ -0.31
LINC00963-214ENST00000622680 FAM184BQ9ULE4 1060 aa13.1□□□□□ -0.31
LINC00963-214ENST00000622680 PRRC2BQ5JSZ5 2229 aaKnown RBP13.09□□□□□ -0.31
LINC00963-214ENST00000622680 PLIN4Q96Q06 1357 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 DCDC2CA8MYV0 355 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 GPAA1O43292 621 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 DNAJB2P25686 324 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 TDO2P48775 406 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 CCDC144BQ3MJ40 725 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 MAMDC4Q6UXC1 1216 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 ANKRD33Q7Z3H0 272 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 KBTBD3Q8NAB2 608 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 PRPF38AQ8NAV1 312 aaKnown RBP13.09□□□□□ -0.31
LINC00963-214ENST00000622680 USP38Q8NB14 1042 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 KLHDC9Q8NEP7 349 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 APPBP2Q92624 585 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 CEP95Q96GE4 821 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC00963-214ENST00000622680 TSEN34Q9BSV6 310 aaKnown RBP13.09□□□□□ -0.31
LINC00963-214ENST00000622680 ECHDC1Q9NTX5 307 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.09□□□□□ -0.31
LINC00963-214ENST00000622680 TBX21Q9UL17 535 aa13.09□□□□□ -0.31
LINC00963-214ENST00000622680 CTDP1Q9Y5B0 961 aaPredicted RBP13.09□□□□□ -0.31
LINC00963-214ENST00000622680 XIRP2A4UGR9 3374 aa13.08□□□□□ -0.32
LINC00963-214ENST00000622680 MOXD2PA6NHM9 499 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms