RNA–Protein interactions for RNA: ENST00000622017.4

TRO-225, Transcript of trophinin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRO, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-225ENST00000622017 SHROOM1Q2M3G4 852 aaPredicted RBP15.9■□□□□ 0.14
TRO-225ENST00000622017 CMTR1Q8N1G2 835 aaKnown RBP15.9■□□□□ 0.14
TRO-225ENST00000622017 CCDC82Q8N4S0 544 aa15.9■□□□□ 0.14
TRO-225ENST00000622017 SRBD1Q8N5C6 995 aaKnown RBP15.9■□□□□ 0.14
TRO-225ENST00000622017 AIFM3Q96NN9 605 aa15.9■□□□□ 0.14
TRO-225ENST00000622017 WDR18Q9BV38 432 aa15.9■□□□□ 0.14
TRO-225ENST00000622017 ARHGEF10LQ9HCE6 1279 aa15.9■□□□□ 0.14
TRO-225ENST00000622017 KCNH4Q9UQ05 1017 aa15.9■□□□□ 0.14
TRO-225ENST00000622017 CNPY2Q9Y2B0 182 aa15.9■□□□□ 0.14
TRO-225ENST00000622017 TRPA1O75762 1119 aa15.89■□□□□ 0.13
TRO-225ENST00000622017 GUCY1A2P33402 732 aa15.89■□□□□ 0.13
TRO-225ENST00000622017 KRT85P78386 507 aa15.89■□□□□ 0.13
TRO-225ENST00000622017 TRIM29Q14134 588 aa15.89■□□□□ 0.13
TRO-225ENST00000622017 KRT40Q6A162 431 aa15.89■□□□□ 0.13
TRO-225ENST00000622017 IFNL1Q8IU54 200 aa15.89■□□□□ 0.13
TRO-225ENST00000622017 KANSL2Q9H9L4 492 aa15.89■□□□□ 0.13
TRO-225ENST00000622017 WBP1LQ9NX94 342 aa15.89■□□□□ 0.13
TRO-225ENST00000622017 GREB1LQ9C091 1923 aaPredicted RBP15.89■□□□□ 0.13
TRO-225ENST00000622017 TESPA1A2RU30 521 aaPredicted RBP15.88■□□□□ 0.13
TRO-225ENST00000622017 PALM3A6NDB9 673 aaPredicted RBP15.88■□□□□ 0.13
TRO-225ENST00000622017 CA12O43570 354 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 TTLL1O95922 423 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 NCLP19338 710 aaKnown RBP15.88■□□□□ 0.13
TRO-225ENST00000622017 HMGCS2P54868 508 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 BACE1P56817 501 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 MTMR2Q13614 643 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 ZYXQ15942 572 aaKnown RBP15.88■□□□□ 0.13
TRO-225ENST00000622017 ATL3Q6DD88 541 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 FAM173BQ6P4H8 233 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 BRI3BPQ8WY22 251 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 LZTS2Q9BRK4 669 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 SH2D4AQ9H788 454 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 GJB4Q9NTQ9 266 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 RNF186Q9NXI6 227 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 MAD2L2Q9UI95 211 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 V9GY48 417 aaPredicted RBP15.88■□□□□ 0.13
TRO-225ENST00000622017 CNTNAP5Q8WYK1 1306 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 PTPRFP10586 1907 aa15.88■□□□□ 0.13
TRO-225ENST00000622017 A0A0G2JLL6 359 aaPredicted RBP15.87■□□□□ 0.13
TRO-225ENST00000622017 RAD21O60216 631 aa15.87■□□□□ 0.13
TRO-225ENST00000622017 HSPA1AP0DMV8 641 aaKnown RBP15.87■□□□□ 0.13
TRO-225ENST00000622017 HSPA1BP0DMV9 641 aaKnown RBP15.87■□□□□ 0.13
TRO-225ENST00000622017 USP14P54578 494 aa15.87■□□□□ 0.13
TRO-225ENST00000622017 ICA1Q05084 483 aa15.87■□□□□ 0.13
TRO-225ENST00000622017 PKN1Q16512 942 aa15.87■□□□□ 0.13
TRO-225ENST00000622017 KLHL40Q2TBA0 621 aa15.87■□□□□ 0.13
TRO-225ENST00000622017 USP17L2Q6R6M4 530 aa15.87■□□□□ 0.13
TRO-225ENST00000622017 BRAPQ7Z569 592 aa15.87■□□□□ 0.13
TRO-225ENST00000622017 PRRT2Q7Z6L0 340 aaPredicted RBP15.87■□□□□ 0.13
TRO-225ENST00000622017 SCAND2PQ9GZW5 306 aaPredicted RBP15.87■□□□□ 0.13
TRO-225ENST00000622017 GDPD2Q9HCC8 539 aa15.87■□□□□ 0.13
TRO-225ENST00000622017 RBM27Q9P2N5 1060 aaKnown RBP15.87■□□□□ 0.13
TRO-225ENST00000622017 CLIP2Q9UDT6 1046 aa15.87■□□□□ 0.13
TRO-225ENST00000622017 DDX49Q9Y6V7 483 aaKnown RBP15.87■□□□□ 0.13
TRO-225ENST00000622017 MYH4Q9Y623 1939 aa15.86■□□□□ 0.13
TRO-225ENST00000622017 SMARCA1P28370 1054 aa15.86■□□□□ 0.13
TRO-225ENST00000622017 PABPC4Q13310 644 aaKnown RBP eCLIP15.86■□□□□ 0.13
TRO-225ENST00000622017 STAG2Q8N3U4 1231 aa15.86■□□□□ 0.13
TRO-225ENST00000622017 PTPN18Q99952 460 aa15.86■□□□□ 0.13
TRO-225ENST00000622017 NYAP2Q9P242 653 aa15.86■□□□□ 0.13
TRO-225ENST00000622017 CFAP45Q9UL16 551 aa15.86■□□□□ 0.13
TRO-225ENST00000622017 THSD7BQ9C0I4 1608 aa15.86■□□□□ 0.13
TRO-225ENST00000622017 BTBD19C9JJ37 291 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 PDHXO00330 501 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 IGF2BP3O00425 579 aaKnown RBP eCLIP15.85■□□□□ 0.13
TRO-225ENST00000622017 FIBPO43427 364 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 TBC1D8O95759 1140 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 PARP1P09874 1014 aaKnown RBP15.85■□□□□ 0.13
TRO-225ENST00000622017 EEF2P13639 858 aaKnown RBP15.85■□□□□ 0.13
TRO-225ENST00000622017 XBP1P17861 261 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 TAF1CQ15572 869 aaPredicted RBP15.85■□□□□ 0.13
TRO-225ENST00000622017 ANKRD23Q86SG2 305 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 PROCA1Q8NCQ7 364 aaPredicted RBP15.85■□□□□ 0.13
TRO-225ENST00000622017 ACER1Q8TDN7 264 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 MKL1Q969V6 931 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 ZNF396Q96N95 335 aaPredicted RBP15.85■□□□□ 0.13
TRO-225ENST00000622017 ZFYVE28Q9HCC9 887 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 TFIP11Q9UBB9 837 aaKnown RBP15.85■□□□□ 0.13
TRO-225ENST00000622017 MYH6P13533 1939 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 ELP1O95163 1332 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 MBD3O95983 291 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 MMP1P03956 469 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 SNHG28P0DPA3 235 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 OSBPP22059 807 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.132e-6■■□□□ 13.9
TRO-225ENST00000622017 SAFBQ15424 915 aaKnown RBP eCLIP15.85■□□□□ 0.13
TRO-225ENST00000622017 SH3D19Q5HYK7 790 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 FAM43AQ8N2R8 423 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 KIAA1683Q9H0B3 1180 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 GOPCQ9HD26 462 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 SAGE1Q9NXZ1 904 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 TSKSQ9UJT2 592 aa15.85■□□□□ 0.13
TRO-225ENST00000622017 PCNTO95613 3336 aa15.84■□□□□ 0.13
TRO-225ENST00000622017 KIF28PB7ZC32 967 aa15.84■□□□□ 0.13
TRO-225ENST00000622017 KLRF2D3W0D1 207 aa15.84■□□□□ 0.13
TRO-225ENST00000622017 PDHBP11177 359 aa15.84■□□□□ 0.13
TRO-225ENST00000622017 SCG2P13521 617 aa15.84■□□□□ 0.13
TRO-225ENST00000622017 CTCFP49711 727 aaPredicted RBP15.84■□□□□ 0.13
TRO-225ENST00000622017 UBE2HP62256 183 aa15.84■□□□□ 0.13
TRO-225ENST00000622017 PFKFB3Q16875 520 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms