RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 CCDC181Q5TID7 509 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 CACNA2D4Q7Z3S7 1137 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 AKR1B15C9JRZ8 316 aaPredicted RBP10.18□□□□□ -0.78
GGA3-222ENST00000621217 PHACTR2O75167 634 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 CFBP00751 764 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 CCDC175P0C221 793 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 NIM1KQ8IY84 436 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 BANK1Q8NDB2 785 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 IGDCC4Q8TDY8 1250 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.18□□□□□ -0.78
GGA3-222ENST00000621217 ALDH8A1Q9H2A2 487 aaPredicted RBP10.18□□□□□ -0.78
GGA3-222ENST00000621217 TBC1D7Q9P0N9 293 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 MAN1B1Q9UKM7 699 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 ZBTB12Q9Y330 459 aaPredicted RBP10.18□□□□□ -0.78
GGA3-222ENST00000621217 EVCP57679 992 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 KIFC2Q96AC6 838 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 TNS2Q63HR2 1409 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 GBP2P32456 591 aaPredicted RBP10.17□□□□□ -0.78
GGA3-222ENST00000621217 UBXN2AP68543 259 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 TCERG1LQ5VWI1 586 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 COL23A1Q86Y22 540 aaPredicted RBP10.17□□□□□ -0.78
GGA3-222ENST00000621217 MLKLQ8NB16 471 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 TBC1D16Q8TBP0 767 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 CNKSR1Q969H4 720 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 CSRNP1Q96S65 589 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 SLF1Q9BQI6 1058 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 CLEC11AQ9Y240 323 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 SPDYE3A6NKU9 549 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 SCG2P13521 617 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 GNA11P29992 359 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 LIFRP42702 1097 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 PPARDQ03181 441 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 TMEM132AQ24JP5 1023 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 CERKLQ49MI3 558 aaPredicted RBP10.17□□□□□ -0.78
GGA3-222ENST00000621217 GBP6Q6ZN66 633 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 PPP1R13BQ96KQ4 1090 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 PSMB7Q99436 277 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 JADE2Q9NQC1 790 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 SEPT11Q9NVA2 429 aaKnown RBP10.17□□□□□ -0.78
GGA3-222ENST00000621217 SERPINB13Q9UIV8 391 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 MYCNP04198 464 aaPredicted RBP10.17□□□□□ -0.78
GGA3-222ENST00000621217 NPR1P16066 1061 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 CDK8P49336 464 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 PLCD1P51178 756 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 EVX2Q03828 476 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 SPECC1LQ69YQ0 1117 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 ILDR1Q86SU0 546 aaPredicted RBP10.17□□□□□ -0.78
GGA3-222ENST00000621217 FLAD1Q8NFF5 587 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 RAB34Q9BZG1 259 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 EPC1Q9H2F5 836 aa10.17□□□□□ -0.78
GGA3-222ENST00000621217 DDX39AO00148 427 aaKnown RBP10.16□□□□□ -0.78
GGA3-222ENST00000621217 EBAG9O00559 213 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 PSMA7O14818 248 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 SORBS3O60504 671 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 SLURP2P0DP57 97 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 PDE4DQ08499 809 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 MAEAQ7L5Y9 396 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.16□□□□□ -0.78
GGA3-222ENST00000621217 KRT9P35527 623 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 TECP42680 631 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 STAG2Q8N3U4 1231 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 NELFBQ8WX92 580 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 PPP6R2O75170 966 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 BMP15O95972 392 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 CCDC40Q4G0X9 1142 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 ARHGAP27Q6ZUM4 889 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 MASTLQ96GX5 879 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 GDAP1L1Q96MZ0 367 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 PIGSQ96S52 555 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 PLEKHA4Q9H4M7 779 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.16□□□□□ -0.78
GGA3-222ENST00000621217 NWD1Q149M9 1564 aa10.16□□□□□ -0.78
GGA3-222ENST00000621217 MACROD2A1Z1Q3 448 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 PP2D1A8MPX8 630 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 ERLIN2O94905 339 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 RC3H1Q5TC82 1133 aaKnown RBP10.15□□□□□ -0.78
GGA3-222ENST00000621217 METTL16Q86W50 562 aaKnown RBP10.15□□□□□ -0.78
GGA3-222ENST00000621217 BLIDQ8IZY5 108 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 IMPACTQ9P2X3 320 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 SEMA3EO15041 775 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 SARNPP82979 210 aaKnown RBP10.15□□□□□ -0.78
GGA3-222ENST00000621217 SPA17Q15506 151 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 AMIGO3Q86WK7 504 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 ENGASEQ8NFI3 743 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 PPM1EQ8WY54 764 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 SETD1AO15047 1707 aaKnown RBP10.15□□□□□ -0.78
GGA3-222ENST00000621217 AKR1B10O60218 316 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 EZRP15311 586 aaKnown RBP10.15□□□□□ -0.78
GGA3-222ENST00000621217 ICA1Q05084 483 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 WWC2Q6AWC2 1192 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 REXO1Q8N1G1 1221 aaKnown RBP10.15□□□□□ -0.78
GGA3-222ENST00000621217 PPP2R2CQ9Y2T4 447 aa10.15□□□□□ -0.78
GGA3-222ENST00000621217 PAK1Q13153 545 aa10.15□□□□□ -0.79
GGA3-222ENST00000621217 ARMCX5Q6P1M9 558 aa10.15□□□□□ -0.79
GGA3-222ENST00000621217 CSGALNACT2Q8N6G5 542 aa10.15□□□□□ -0.79
GGA3-222ENST00000621217 NKX2-3Q8TAU0 364 aa10.15□□□□□ -0.79
GGA3-222ENST00000621217 RNF26Q9BY78 433 aaPredicted RBP10.15□□□□□ -0.79
GGA3-222ENST00000621217 FOXP1Q9H334 677 aaPredicted RBP10.15□□□□□ -0.79
GGA3-222ENST00000621217 POLLQ9UGP5 575 aa10.15□□□□□ -0.79
GGA3-222ENST00000621217 ADAMTSL3P82987 1691 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms