RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 OSBPL5Q9H0X9 879 aaPredicted RBP14.39□□□□□ -0.11
TNFAIP3-211ENST00000621150 CCDC196A0A1B0GTZ2 297 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 CCDC85CA6NKD9 419 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 TNRC18O15417 2968 aaPredicted RBP14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 CALM1P0DP23 149 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 CALM2P0DP24 149 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 CALM3P0DP25 149 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 ZBTB48P10074 688 aaPredicted RBP14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 IREB2P48200 963 aaKnown RBP14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 TNNI2P48788 182 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 CACNB3P54284 484 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 KRT85P78386 507 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 NFIAQ12857 509 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 TTC6Q86TZ1 520 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 NEDD1Q8NHV4 660 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 C8orf76Q96K31 380 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 CALR3Q96L12 384 aaKnown RBP14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 AIFM3Q96NN9 605 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 MAP3K14Q99558 947 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 GPCPD1Q9NPB8 672 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 CENPFP49454 3210 aa14.38□□□□□ -0.11
TNFAIP3-211ENST00000621150 SSTR3P32745 418 aaPredicted RBP14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 CCDC178Q5BJE1 867 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 OTUD7BQ6GQQ9 843 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 CATIPQ7Z7H3 387 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 ANKRD13AQ8IZ07 590 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 WNK4Q96J92 1243 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 ALG1Q9BT22 464 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 MKNK2Q9HBH9 465 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 ZNF287Q9HBT7 754 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 GJB4Q9NTQ9 266 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 SIPA1L1O43166 1804 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 MYH15Q9Y2K3 1946 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 IGKV6D-41A0A0C4DH26 115 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 FSD2A1L4K1 749 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 FIBPO43427 364 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 GUCY1A2P33402 732 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 UBE2HP62256 183 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 GUCY1B3Q02153 619 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 ATL3Q6DD88 541 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 TMTC3Q6ZXV5 915 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 CFHR5Q9BXR6 569 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 RNF26Q9BY78 433 aaPredicted RBP14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 EHD4Q9H223 541 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 RBM28Q9NW13 759 aaKnown RBP14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 FAM198AQ9UFP1 575 aa14.37□□□□□ -0.11
TNFAIP3-211ENST00000621150 HTTP42858 3142 aa14.36□□□□□ -0.11
TNFAIP3-211ENST00000621150 MANSC4A6NHS7 340 aaPredicted RBP14.36□□□□□ -0.11
TNFAIP3-211ENST00000621150 INHBEP58166 350 aa14.36□□□□□ -0.11
TNFAIP3-211ENST00000621150 SSRP1Q08945 709 aaKnown RBP14.36□□□□□ -0.11
TNFAIP3-211ENST00000621150 CSPP1Q1MSJ5 1256 aa14.36□□□□□ -0.11
TNFAIP3-211ENST00000621150 ZNF444Q8N0Y2 327 aaPredicted RBP14.36□□□□□ -0.11
TNFAIP3-211ENST00000621150 NUP133Q8WUM0 1156 aa14.36□□□□□ -0.11
TNFAIP3-211ENST00000621150 ZNF296Q8WUU4 475 aaPredicted RBP14.36□□□□□ -0.11
TNFAIP3-211ENST00000621150 SHISA4Q96DD7 197 aa14.36□□□□□ -0.11
TNFAIP3-211ENST00000621150 SLC26A6Q9BXS9 759 aa14.36□□□□□ -0.11
TNFAIP3-211ENST00000621150 SCAND2PQ9GZW5 306 aaPredicted RBP14.36□□□□□ -0.11
TNFAIP3-211ENST00000621150 TMEM63CQ9P1W3 806 aa14.36□□□□□ -0.11
TNFAIP3-211ENST00000621150 COL2A1P02458 1487 aaPredicted RBP14.36□□□□□ -0.11
TNFAIP3-211ENST00000621150 GREB1LQ9C091 1923 aaPredicted RBP14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 KIF28PB7ZC32 967 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 TSPY3P0CV98 308 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 TSPY8P0CW00 308 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 DEKP35659 375 aaKnown RBP14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 GJA5P36382 358 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 FOSBP53539 338 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 MDM2Q00987 491 aaPredicted RBP14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 PICALMQ13492 652 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 PKN1Q16512 942 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 FKBP1CQ5VVH2 108 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 KRT40Q6A162 431 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 CTU1Q7Z7A3 348 aaKnown RBP14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 FAM83AQ86UY5 434 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 METTL16Q86W50 562 aaKnown RBP14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 ZFPM1Q8IX07 1006 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 LEO1Q8WVC0 666 aaPredicted RBP14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 R3HDMLQ9H3Y0 253 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 ATRNL1Q5VV63 1379 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 CNTNAP5Q8WYK1 1306 aa14.35□□□□□ -0.11
TNFAIP3-211ENST00000621150 GPR25O00155 361 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 IGF2BP3O00425 579 aaKnown RBP eCLIP14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 PRPF3O43395 683 aaKnown RBP14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 PLEKHA8P1O95397 391 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 DEXIO95424 95 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 ALDH1A1P00352 501 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 SHMT1P34896 483 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 ZNF445P59923 1031 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 MAP3K9P80192 1104 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 NOM1Q5C9Z4 860 aaKnown RBP14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 SH3BP5LQ7L8J4 393 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 BRAPQ7Z569 592 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 WASF1Q92558 559 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 DNAJC18Q9H819 358 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 ELP3Q9H9T3 547 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 TMOD2Q9NZR1 351 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 TFIP11Q9UBB9 837 aaKnown RBP14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 SWAP70Q9UH65 585 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 SERPINB13Q9UIV8 391 aa14.34□□□□□ -0.11
TNFAIP3-211ENST00000621150 RCOR1Q9UKL0 485 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms