RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 GNAT2P19087 354 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 GNA11P29992 359 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 RNASE9P60153 205 aaKnown RBP9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 IRX5P78411 483 aaPredicted RBP9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 CHRNDQ07001 517 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 TMCO3Q6UWJ1 677 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 DYDC1Q8WWB3 177 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 MAP3K14Q99558 947 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 DESI2Q9BSY9 194 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 PLA2G12BQ9BX93 195 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 SCAF8Q9UPN6 1271 aaKnown RBP9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 HPSEQ9Y251 543 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 TRAF5O00463 557 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 PSMA7O14818 248 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 C21orf2O43822 256 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 KRT13P13646 458 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 PAFAH1B1P43034 410 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 MRPL12P52815 198 aaKnown RBP9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 NTRK3Q16288 839 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 NCAPH2Q6IBW4 605 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 HS2ST1Q7LGA3 356 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 HOOK3Q86VS8 718 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 LCORLQ8N3X6 602 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 TEKT1Q969V4 418 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 MPHOSPH6Q99547 160 aaKnown RBP9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 MAN1B1Q9UKM7 699 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 MORC2Q9Y6X9 1032 aaPredicted RBP9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 RIC1Q4ADV7 1423 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 TESPA1A2RU30 521 aaPredicted RBP9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 CASQ1P31415 396 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 KRT2P35908 639 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 BMS1Q14692 1282 aaKnown RBP9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 CRACR2AQ9BSW2 395 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 EPC1Q9H2F5 836 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 FAM217BQ9NTX9 383 aaPredicted RBP9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 USO1O60763 962 aaKnown RBP9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 FMNL1O95466 1100 aaPredicted RBP9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 MMP1P03956 469 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 GADL1Q6ZQY3 521 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 STXBP4Q6ZWJ1 553 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 SULF1Q8IWU6 871 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 NELFCDQ8IXH7 590 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 GLG1Q92896 1179 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 HSD3B7Q9H2F3 369 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 PPP2R2CQ9Y2T4 447 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 CLCN6P51797 869 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 IFFO1Q0D2I5 559 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 ERFEQ4G0M1 354 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 RILPL1Q5EBL4 403 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 USP49Q70CQ1 688 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 OXER1Q8TDS5 423 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 ARHGEF10LQ9HCE6 1279 aa9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 SAMSN1Q9NSI8 373 aaKnown RBP9.25□□□□□ -0.93
PTPDC1-204ENST00000620992 CNTRLQ7Z7A1 2325 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 CYP2D7A0A087X1C5 515 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 ARHGAP6O43182 974 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 ATXN8OSP0DMR3 200 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 IFNAR1P17181 557 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 CASP1P29466 404 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 ALDH1B1P30837 517 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 LIFRP42702 1097 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 GABPB1Q06547 395 aaPredicted RBP9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 FMR1Q06787 632 aaKnown RBP eCLIP9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 CSADQ9Y600 493 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 GSG1L2A8MUP6 293 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 SGMS1Q86VZ5 419 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 IMPG2Q9BZV3 1241 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 VPS16Q9H269 839 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 LZTFL1Q9NQ48 299 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 ABCC12Q96J65 1359 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 MYH15Q9Y2K3 1946 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 FAM196BA6NMK8 535 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 COBLO75128 1261 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 GDF11O95390 407 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 DEXIO95424 95 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 BMP6P22004 513 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 SPECC1LQ69YQ0 1117 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 ZNF654Q8IZM8 581 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 NLGN1Q8N2Q7 840 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 CSRNP2Q9H175 543 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 L2HGDHQ9H9P8 463 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 SUGCTQ9HAC7 445 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 ALS2Q96Q42 1657 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 CDHR2Q9BYE9 1310 aa9.24□□□□□ -0.93
PTPDC1-204ENST00000620992 TOB1P50616 345 aaPredicted RBP9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 VGLL2Q8N8G2 317 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 FANCBQ8NB91 859 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 GPKOWQ92917 476 aaPredicted RBP eCLIP9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 THRAP3Q9Y2W1 955 aaKnown RBP9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 MROH5Q6ZUA9 1318 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 ARID4AP29374 1257 aaPredicted RBP9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 DYNLL1P63167 89 aaKnown RBP9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 SMYD4Q8IYR2 804 aaPredicted RBP9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 METTL13Q8N6R0 699 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 ANO3Q9BYT9 981 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 ABCC6O95255 1503 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 TCRBV5S4A2TA0A5A2 114 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 FAM205CA6NFA0 338 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms